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PDB: 17801 件

8BYH
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Crystal structure of TrmD domain from Calditerrivibrio nitroreducens in complex with S-adenosyl-L-methionine
分子名称: 1,2-ETHANEDIOL, CHLORIDE ION, GLYCEROL, ...
著者Kluza, A, Lewandowska, I, Sulkowska, J.
登録日2022-12-12
公開日2023-01-11
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.19 Å)
主引用文献Are there double knots in proteins? Prediction and in vitro verification based on TrmD-Tm1570 fusion from C. nitroreducens. To be published
To Be Published
6IKT
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K1U complex structure of peptide deformylase from Xanthomonas oryzae pv. oryzae
分子名称: (3R)-3-benzyl-4-oxo-4-[(2-oxo-2-phenylethyl)sulfanyl]butanoic acid, CADMIUM ION, NICKEL (II) ION, ...
著者Lee, I.H, Kang, L.W.
登録日2018-10-16
公開日2019-10-23
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献K1U complex structure of peptide deformylase from Xanthomonas oryzae pv. oryzae
To be published
6IL0
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K3U complex structure of peptide deformylase from Xanthomonas oryzae pv. oryzae
分子名称: NICKEL (II) ION, Peptide deformylase, S-(2-oxo-2-phenylethyl) (2R)-2-benzyl-4,4,4-trifluorobutanethioate
著者Lee, I.H, Kang, L.W.
登録日2018-10-16
公開日2019-10-23
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.93 Å)
主引用文献FBIs complex structure of peptide deformylase from Xanthomonas oryzae pv. oryzae
To be published
6IL9
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One Glycerol complexed Crystal structure of fructuronate-tagaturonate epimerase UxaE from Cohnella laeviribosi
分子名称: Fructuronate-tagaturonate epimerase UxaE from Cohnella laeviribosi in complex with 1 glycerol, GLYCEROL, ZINC ION
著者Choi, M.Y, Kang, L.W, Ho, T.H, Nguyen, D.Q, Lee, I.H, Lee, J.H, Park, Y.S, Park, H.J.
登録日2018-10-17
公開日2019-10-23
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (1.72005355 Å)
主引用文献Crystal structure of fructuronate-tagaturonate epimerase UxaE from Cohnella laeviribosi
To Be Published
3ARV
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BU of 3arv by Molmil
Crystal Structure Analysis of Chitinase A from Vibrio harveyi with novel inhibitors - complex structure with Sanguinarine
分子名称: 13-methyl[1,3]benzodioxolo[5,6-c][1,3]dioxolo[4,5-i]phenanthridin-13-ium, Chitinase A, GLYCEROL
著者Pantoom, S, Vetter, I.R, Prinz, H, Suginta, W.
登録日2010-12-09
公開日2011-04-20
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Potent family-18 chitinase inhibitors: x-ray structures, affinities, and binding mechanisms
J.Biol.Chem., 286, 2011
3H3N
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BU of 3h3n by Molmil
Glycerol Kinase H232R with Glycerol
分子名称: 1,2-ETHANEDIOL, GLYCEROL, Glycerol kinase, ...
著者Yeh, J.I, Kettering, R.D.
登録日2009-04-16
公開日2009-06-02
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.73 Å)
主引用文献Structural characterizations of glycerol kinase: unraveling phosphorylation-induced long-range activation
Biochemistry, 48, 2009
3H46
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Glycerol Kinase H232E with Glycerol
分子名称: 1,2-ETHANEDIOL, GLYCEROL, Glycerol kinase, ...
著者Yeh, J.I, Kettering, R.D.
登録日2009-04-17
公開日2009-06-02
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Structural characterizations of glycerol kinase: unraveling phosphorylation-induced long-range activation
Biochemistry, 48, 2009
8C1A
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BU of 8c1a by Molmil
SARS-CoV-2 NSP3 macrodomain in complex with aztreonam
分子名称: 1,2-ETHANEDIOL, Replicase polyprotein 1ab, aztreonam
著者Schuller, M, Ahel, I.
登録日2022-12-20
公開日2023-03-08
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Discovery and Development Strategies for SARS-CoV-2 NSP3 Macrodomain Inhibitors.
Pathogens, 12, 2023
3GJS
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BU of 3gjs by Molmil
Caspase-3 Binds Diverse P4 Residues in Peptides
分子名称: Ac-YVAD-Cho inhibitor, Caspase-3 subunit p12, Caspase-3 subunit p17
著者Fang, B, Fu, G, Agniswamy, J, Harrison, R.W, Weber, I.T.
登録日2009-03-09
公開日2009-03-24
最終更新日2011-08-17
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Caspase-3 binds diverse P4 residues in peptides as revealed by crystallography and structural modeling.
Apoptosis, 14, 2009
3H63
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BU of 3h63 by Molmil
Catalytic domain of human Serine/Threonine Phosphatase 5 (PP5c) with two Mn2+ atoms originally soaked with cantharidin (which is present in the structure in the hydrolyzed form)
分子名称: (1R,2S,3R,4S)-2,3-dimethyl-7-oxabicyclo[2.2.1]heptane-2,3-dicarboxylic acid, MANGANESE (II) ION, Serine/threonine-protein phosphatase 5
著者Bertini, I, Calderone, V, Fragai, M, Luchinat, C, Talluri, E.
登録日2009-04-23
公開日2009-09-29
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.3 Å)
主引用文献Structural basis of serine/threonine phosphatase inhibition by the archetypal small molecules cantharidin and norcantharidin
J.Med.Chem., 52, 2009
5LYE
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Re-refined structure of the bacteriophage T4 short tail fibre PDB entry 1H6W containing 71 additionally identified residues
分子名称: CHLORIDE ION, Gp12, SULFATE ION
著者van Raaij, M.J, Taylor, N.M.I, Leiman, P.G.
登録日2016-09-27
公開日2018-01-17
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Contractile injection systems of bacteriophages and related systems.
Mol. Microbiol., 108, 2018
4L99
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BU of 4l99 by Molmil
Structure of the RBP from lactococcal phage 1358 in complex with glycerol
分子名称: GLYCEROL, Receptor Binding Protein, ZINC ION
著者Farenc, C, Spinelli, S, Bebeacua, C, Tremblay, D, Orlov, I, Blangy, S, Klaholz, B.P, Moineau, S, Cambillau, C.
登録日2013-06-18
公開日2014-04-30
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献A Virulent Siphophage CyoEM Structure and Host Recognition and Infection Mechanism
To be Published
1UCG
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BU of 1ucg by Molmil
Crystal structure of Ribonuclease MC1 N71T mutant
分子名称: MANGANESE (II) ION, Ribonuclease MC
著者Suzuki, A, Numata, T, Yao, M, Tanaka, I, Kimura, M.
登録日2003-04-14
公開日2003-04-29
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Crystal structures of the ribonuclease MC1 mutants N71T and N71S in complex with 5'-GMP: structural basis for alterations in substrate specificity
Biochemistry, 42, 2003
5V0Y
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BU of 5v0y by Molmil
Solution structure of arenicin-3.
分子名称: arenicin-3
著者Edwards, I.A, Mobli, M.
登録日2017-02-28
公開日2018-08-08
最終更新日2020-06-10
実験手法SOLUTION NMR
主引用文献An amphipathic peptide with antibiotic activity against multidrug-resistant Gram-negative bacteria
Nat Commun, 2020
5V2A
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BU of 5v2a by Molmil
Crystal structure of Fab H7.167 in complex with influenza virus hemagglutinin from A/Shanghai/02/2013 (H7N9)
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, Heavy chain of H7.167 antibody, Hemagglutinin, ...
著者Zhang, H, Zhu, X, Wilson, I.A.
登録日2017-03-03
公開日2017-04-05
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (4.656 Å)
主引用文献H7N9 influenza virus neutralizing antibodies that possess few somatic mutations.
J. Clin. Invest., 126, 2016
7LXL
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BU of 7lxl by Molmil
Crystal structure of human CYP3A4 bound to the testosterone dimer
分子名称: 17alpha-hydroxy-7alpha-[(2Z)-4-(17beta-hydroxy-3-oxo-8alpha-androst-4-en-7beta-yl)but-2-en-1-yl]-8alpha,10alpha,13alpha,14beta-androst-4-en-3-one, Cytochrome P450 3A4, PROTOPORPHYRIN IX CONTAINING FE
著者Sevrioukova, I.F.
登録日2021-03-04
公開日2021-04-28
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.75 Å)
主引用文献Innovative C 2 -symmetric testosterone and androstenedione dimers: Design, synthesis, biological evaluation on prostate cancer cell lines and binding study to recombinant CYP3A4.
Eur.J.Med.Chem., 220, 2021
6MAJ
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BU of 6maj by Molmil
HBO1 is required for the maintenance of leukaemia stem cells
分子名称: 4-fluoro-N'-[(3-hydroxyphenyl)sulfonyl]-5-methyl[1,1'-biphenyl]-3-carbohydrazide, BRD1 protein, GLYCEROL, ...
著者Ren, B, Peat, T.S, Monahan, B, Dawson, M, Street, I.
登録日2018-08-27
公開日2019-12-25
最終更新日2020-01-22
実験手法X-RAY DIFFRACTION (2.139 Å)
主引用文献HBO1 is required for the maintenance of leukaemia stem cells.
Nature, 577, 2020
1UE4
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BU of 1ue4 by Molmil
Crystal structure of d(GCGAAAGC)
分子名称: 5'-D(*GP*CP*GP*AP*AP*AP*GP*C)-3', MAGNESIUM ION
著者Sunami, T, Kondo, J, Hirao, I, Watanabe, K, Miura, K, Takenaka, A.
登録日2003-05-09
公開日2004-03-09
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Structures of d(GCGAAGC) and d(GCGAAAGC) (tetragonal form): a switching of partners of the sheared G.A pairs to form a functional G.AxA.G crossing.
Acta Crystallogr.,Sect.D, 60, 2004
1UDU
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BU of 1udu by Molmil
Crystal structure of Human Phosphodiesterase 5 complexed with tadalafil(Cialis)
分子名称: 6-BENZO[1,3]DIOXOL-5-YL-2-METHYL-2,3,6,7,12,12A-HEXAHYDRO-PYRAZINO[1',2':1,6]PYRIDO[3,4-B]INDOLE-1,4-DIONE, MAGNESIUM ION, ZINC ION, ...
著者Sung, B.-J, Lee, J.I, Heo, Y.-S, Kim, J.H, Moon, J, Yoon, J.M, Hyun, Y.-L, Kim, E, Eum, S.J, Lee, T.G, Cho, J.M, Park, S.-Y, Lee, J.-O, Jeon, Y.H, Hwang, K.Y, Ro, S.
登録日2003-05-06
公開日2004-05-11
最終更新日2023-12-27
実験手法X-RAY DIFFRACTION (2.83 Å)
主引用文献Structure of the catalytic domain of human phosphodiesterase 5 with bound drug molecules
Nature, 425, 2003
6A28
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Crystal structure of PprA W183R mutant form 2
分子名称: DNA repair protein PprA, SULFATE ION
著者Adachi, M, Shibazaki, C, Shimizu, R, Arai, S, Satoh, K, Narumi, I, Kuroki, R.
登録日2018-06-09
公開日2018-12-26
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.193 Å)
主引用文献Extended structure of pleiotropic DNA repair-promoting protein PprA from Deinococcus radiodurans.
FASEB J., 33, 2019
7NH4
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Co-Crystal Structure of Akt1 in Complex with Covalent-Allosteric Akt Inhibitor 3
分子名称: ACETATE ION, RAC-alpha serine/threonine-protein kinase, ~{N}-[3-[1-[[4-[5-(hydroxymethyl)-3-phenyl-pyridin-2-yl]phenyl]methyl]piperidin-4-yl]-2-oxidanylidene-1~{H}-benzimidazol-5-yl]propanamide
著者Landel, I, Mueller, M.P, Rauh, D.
登録日2021-02-10
公開日2021-09-08
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Cellular model system to dissect the isoform-selectivity of Akt inhibitors.
Nat Commun, 12, 2021
4JAV
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BU of 4jav by Molmil
Structural basis of a rationally rewired protein-protein interface (HK853wt and RR468mutant V13P, L14I, I17M and N21V)
分子名称: ADENOSINE-5'-DIPHOSPHATE, CHLORIDE ION, Histidine kinase, ...
著者Podgornaia, A.I, Casino, P, Marina, A, Laub, M.T.
登録日2013-02-19
公開日2013-09-04
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (3.1 Å)
主引用文献Structural basis of a rationally rewired protein-protein interface critical to bacterial signaling
Structure, 21, 2013
7NH5
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Co-Crystal Structure of Akt1 in Complex with Covalent-Allosteric Akt Inhibitor 6
分子名称: ACETATE ION, RAC-alpha serine/threonine-protein kinase, ~{N}-methyl-6-[4-[[4-[2-oxidanylidene-6-(propanoylamino)-3~{H}-benzimidazol-1-yl]piperidin-1-yl]methyl]phenyl]-5-phenyl-pyridine-3-carboxamide
著者Landel, I, Mueller, M.P, Rauh, D.
登録日2021-02-10
公開日2021-09-08
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Cellular model system to dissect the isoform-selectivity of Akt inhibitors.
Nat Commun, 12, 2021
3AS0
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Crystal Structure Analysis of Chitinase A from Vibrio harveyi with novel inhibitors - W275G mutant complex structure with Sanguinarine
分子名称: 13-methyl[1,3]benzodioxolo[5,6-c][1,3]dioxolo[4,5-i]phenanthridin-13-ium, Chitinase A, GLYCEROL
著者Pantoom, S, Vetter, I.R, Prinz, H, Suginta, W.
登録日2010-12-09
公開日2011-04-20
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Potent family-18 chitinase inhibitors: x-ray structures, affinities, and binding mechanisms
J.Biol.Chem., 286, 2011
1YH3
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Crystal structure of human CD38 extracellular domain
分子名称: ADP-ribosyl cyclase 1
著者Liu, Q, Kriksunov, I.A, Graeff, R, Munshi, C, Lee, H.C, Hao, Q.
登録日2005-01-06
公開日2005-09-27
最終更新日2021-10-20
実験手法X-RAY DIFFRACTION (1.91 Å)
主引用文献Crystal structure of human CD38 extracellular domain.
Structure, 13, 2005

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件を2024-08-07に公開中

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