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PDB: 17801 件

2IW4
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CRYSTAL STRUCTURE OF BASILLUS SUBTILIS FAMILY II INORGANIC PYROPHOSPHATASE MUTANT, H98Q, IN COMPLEX WITH PNP
分子名称: FE (III) ION, GLYCEROL, IMIDODIPHOSPHORIC ACID, ...
著者Fabrichniy, I.P, Lehtio, L, Oksanen, E, Goldman, A.
登録日2006-06-26
公開日2006-11-07
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.15 Å)
主引用文献A Trimetal Site and Substrate Distortion in a Family II Inorganic Pyrophosphatase.
J.Biol.Chem., 282, 2007
8SFO
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WT CRISPR-Cas12a with a 20bp R-loop and nontarget strand in the RuvC active site.
分子名称: CRISPR-associated endonuclease Cas12a, DNA (35-MER), DNA (40-MER), ...
著者Strohkendl, I, Taylor, D.W.
登録日2023-04-11
公開日2024-07-03
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献WT CRISPR-Cas12a with a 20bp R-loop and nontarget strand in the RuvC active site.
To Be Published
4NPI
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1.94 Angstroms X-ray crystal structure of NAD- and intermediate- bound alpha-aminomuconate-epsilon-semialdehyde dehydrogenase from Pseudomonas fluorescens
分子名称: (2Z,4E)-2-hydroxy-6-oxohexa-2,4-dienoic acid, 2-aminomuconate 6-semialdehyde dehydrogenase, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, ...
著者Huo, L, Davis, I, Liu, F, Iwaki, H, Hasegawa, Y, Liu, A.
登録日2013-11-21
公開日2014-12-24
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.94 Å)
主引用文献Crystallographic and spectroscopic snapshots reveal a dehydrogenase in action.
Nat Commun, 6, 2015
8SFN
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WT CRISPR-Cas12a with a 16bp R-loop and nontarget strand in the RuvC active site.
分子名称: CRISPR-associated endonuclease Cas12a, DNA (30-MER), DNA (31-MER), ...
著者Strohkendl, I, Taylor, D.W.
登録日2023-04-11
公開日2024-07-03
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献WT CRISPR-Cas12a with a 16bp R-loop and nontarget strand in the RuvC active site.
To Be Published
2IKC
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Crystal structure of sheep lactoperoxidase at 3.25 A resolution reveals the binding sites for formate
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
著者Sheikh, I.A, Singh, N, Singh, A.K, Sharma, S, Singh, T.P.
登録日2006-10-02
公開日2006-10-17
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (3.25 Å)
主引用文献Crystal structure of sheep lactoperoxidase at 3.25 A resolution reveals the binding sites for formate
To be Published
8SFI
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WT CRISPR-Cas12a with a 8bp R-loop
分子名称: CRISPR-associated endonuclease Cas12a, DNA (5'-D(P*CP*TP*TP*AP*TP*CP*AP*CP*TP*AP*AP*AP*AP*GP*AP*TP*CP*GP*GP*AP*AP*G)-3'), DNA (5'-D(P*CP*TP*TP*CP*CP*GP*AP*TP*CP*TP*TP*TP*TP*AP*GP*TP*GP*AP*TP*A)-3'), ...
著者Strohkendl, I, Taylor, D.W.
登録日2023-04-11
公開日2024-07-03
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献WT CRISPR-Cas12a with a 8bp R-loop
To Be Published
8SFP
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WT CRISPR-Cas12a with the target strand in the RuvC active site.
分子名称: CRISPR-associated endonuclease Cas12a, DNA (40-MER), DNA (5'-D(P*CP*TP*TP*CP*CP*GP*AP*TP*CP*TP*TP*TP*TP*AP*GP*TP*GP*AP*TP*A)-3'), ...
著者Strohkendl, I, Taylor, D.W.
登録日2023-04-11
公開日2024-07-03
実験手法ELECTRON MICROSCOPY (3.8 Å)
主引用文献WT CRISPR-Cas12a with the target strand in the RuvC active site.
To Be Published
2BI6
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BU of 2bi6 by Molmil
NMR STUDY OF BROMELAIN INHIBITOR VI FROM PINEAPPLE STEM
分子名称: BROMELAIN INHIBITOR VI
著者Hatano, K.-I.
登録日1995-12-07
公開日1996-04-03
最終更新日2017-11-29
実験手法SOLUTION NMR
主引用文献Solution structure of bromelain inhibitor IV from pineapple stem: structural similarity with Bowman-Birk trypsin/chymotrypsin inhibitor from soybean.
Biochemistry, 35, 1996
8SFH
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WT CRISPR-Cas12a with a 5bp R-loop
分子名称: CRISPR-associated endonuclease Cas12a, DNA (32-MER), RNA (27-MER)
著者Strohkendl, I, Taylor, D.W.
登録日2023-04-11
公開日2024-07-03
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献WT CRISPR-Cas12a with a 5bp R-loop
To Be Published
8SFR
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WT CRISPR-Cas12a post nontarget strand cleavage.
分子名称: CRISPR-associated endonuclease Cas12a, DNA (34-MER), DNA (5'-D(P*CP*TP*TP*CP*CP*GP*AP*TP*CP*TP*TP*TP*TP*AP*GP*TP*GP*AP*T)-3'), ...
著者Strohkendl, I, Taylor, D.W.
登録日2023-04-11
公開日2024-07-03
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献WT CRISPR-Cas12a post nontarget strand cleavage.
To Be Published
1JYU
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BU of 1jyu by Molmil
Xray Structure of Grb2 SH2 Domain
分子名称: GROWTH FACTOR RECEPTOR-BOUND PROTEIN 2
著者Nioche, P, Liu, W.-Q, Broutin, I, Charbonnier, F, Latreille, M.-T, Vidal, M, Roques, B, Garbay, C, Ducruix, A.
登録日2001-09-13
公開日2002-03-13
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.75 Å)
主引用文献Crystal structures of the SH2 domain of Grb2: highlight on the binding of a new high-affinity inhibitor.
J.Mol.Biol., 315, 2002
4NTX
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BU of 4ntx by Molmil
Structure of acid-sensing ion channel in complex with snake toxin and amiloride
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 3,5-DIAMINO-N-(AMINOIMINOMETHYL)-6-CHLOROPYRAZINECARBOXAMIDE, Acid-sensing ion channel 1, ...
著者Baconguis, I, Bohlen, C.J, Goehring, A, Julius, D, Gouaux, E.
登録日2013-12-02
公開日2014-02-19
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (2.27 Å)
主引用文献X-ray structure of Acid-sensing ion channel 1-snake toxin complex reveals open state of a na(+)-selective channel.
Cell(Cambridge,Mass.), 156, 2014
4BG5
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Lyme disease associated outer surface protein BBA65 from Borrelia burgdorferi
分子名称: BBA65
著者Brangulis, K, Petrovskis, I, Kazaks, A, Tars, K.
登録日2013-03-22
公開日2014-04-09
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (3.4 Å)
主引用文献Structural analysis of the outer surface proteins from Borrelia burgdorferi paralogous gene family 54 that are thought to be the key players in the pathogenesis of Lyme disease
J.Struct.Biol., 2020
1KDK
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BU of 1kdk by Molmil
THE STRUCTURE OF THE N-TERMINAL LG DOMAIN OF SHBG IN CRYSTALS SOAKED WITH EDTA
分子名称: 5-ALPHA-DIHYDROTESTOSTERONE, Sex Hormone-Binding Globulin
著者Grishkovskaya, I, Avvakumov, G.V, Hammond, G.L, Muller, Y.A.
登録日2001-11-13
公開日2002-05-15
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Resolution of a disordered region at the entrance of the human sex hormone-binding globulin steroid-binding site.
J.Mol.Biol., 318, 2002
4NWT
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BU of 4nwt by Molmil
Crystal structure of the anti-human NGF Fab APE1531
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, ACETATE ION, APE1531 Ab Fab heavy chain, ...
著者Verdino, P, Stanfield, R.L, Wilson, I.A.
登録日2013-12-06
公開日2014-10-22
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Nucleotide insertions and deletions complement point mutations to massively expand the diversity created by somatic hypermutation of antibodies.
J.Biol.Chem., 289, 2014
4Q6N
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BU of 4q6n by Molmil
Structural analysis of the tripeptide-bound form of Helicobacter pylori Csd4, a D,L-carboxypeptidase
分子名称: CALCIUM ION, Conserved hypothetical secreted protein, GLYCEROL, ...
著者Kim, H.S, Kim, J, Im, H.N, An, D.R, Lee, M, Hesek, D, Mobashery, S, Kim, J.Y, Cho, K, Yoon, H.J, Han, B.W, Lee, B.I, Suh, S.W.
登録日2014-04-23
公開日2014-11-05
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Structural basis for the recognition of muramyltripeptide by Helicobacter pylori Csd4, a D,L-carboxypeptidase controlling the helical cell shape
Acta Crystallogr.,Sect.D, 70, 2014
1MJI
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BU of 1mji by Molmil
DETAILED ANALYSIS OF RNA-PROTEIN INTERACTIONS WITHIN THE BACTERIAL RIBOSOMAL PROTEIN L5/5S RRNA COMPLEX
分子名称: 50S ribosomal protein L5, 5S rRNA fragment, MAGNESIUM ION, ...
著者Perederina, A, Nevskaya, N, Nikonov, O, Nikulin, A, Dumas, P, Yao, M, Tanaka, I, Garber, M, Gongadze, G, Nikonov, S.
登録日2002-08-28
公開日2003-01-21
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Detailed analysis of RNA-protein interactions within the bacterial ribosomal protein L5/5S rRNA complex
RNA, 8, 2002
2GQL
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BU of 2gql by Molmil
Solution structure of Human Ni(II)-Sco1
分子名称: NICKEL (II) ION, SCO1 protein homolog, mitochondrial
著者Banci, L, Bertini, I, Calderone, V, Ciofi-Baffoni, S, Mangani, S, Palumaa, P, Martinelli, M, Wang, S, Structural Proteomics in Europe (SPINE)
登録日2006-04-21
公開日2006-06-06
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献A hint for the function of human Sco1 from different structures.
Proc.Natl.Acad.Sci.Usa, 103, 2006
1MEN
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complex structure of human GAR Tfase and substrate beta-GAR
分子名称: GLYCINAMIDE RIBONUCLEOTIDE, Phosphoribosylglycinamide formyltransferase
著者Zhang, Y, Desharnais, J, Greasley, S.E, Beardsley, G.P, Boger, D.L, Wilson, I.A.
登録日2002-08-08
公開日2002-12-18
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (2.23 Å)
主引用文献Crystal structures of human GAR Tfase of low and high pH and with substrate beta-GAR
Biochemistry, 41, 2002
1KVH
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NCSi-gb-bulge-DNA complex induced formation of a DNA bulge structure by a molecular wedge ligand-post-activated neocarzinostatin chromophore
分子名称: 5'-D(*CP*CP*CP*GP*AP*TP*GP*C)-3', 5'-D(*GP*CP*AP*AP*TP*TP*CP*GP*GP*G)-3', SPIRO[[7-METHOXY-5-METHYL-1,2-DIHYDRO-NAPHTHALENE]-3,1'-[5-HYDROXY-9-[2-METHYLAMINO-2,6-DIDEOXYGALACTOPYRANOSYL-OXY]-5-(2-OXO-[1,3]DIOXOLAN-4-YL)-3A,5,9,9A-TETRAHYDRO-3H-1-OXA-CYCLOPENTA[A]-S-INDACEN-2-ONE]]
著者Gao, X, Stassinopoulos, A, Ji, J, Kwon, Y, Bare, S, Goldberg, I.H.
登録日2002-01-26
公開日2002-06-19
最終更新日2024-05-22
実験手法SOLUTION NMR
主引用文献Induced formation of a DNA bulge structure by a molecular wedge ligand-postactivated neocarzinostatin chromophore.
Biochemistry, 41, 2002
2DI3
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Crystal structure of the transcriptional factor CGL2915 from Corynebacterium glutamicum
分子名称: Bacterial regulatory proteins, GntR family, ZINC ION
著者Gao, Y.G, Yao, M, Tanaka, I.
登録日2006-03-28
公開日2007-03-28
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (2.05 Å)
主引用文献Structural and functional characterization of the LldR from Corynebacterium glutamicum: a transcriptional repressor involved in L-lactate and sugar utilization
Nucleic Acids Res., 36, 2008
4D0T
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BU of 4d0t by Molmil
GalNAc-T2 crystal soaked with UDP-GalNAc, EA2 peptide and manganese
分子名称: 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-galactopyranose, MANGANESE (II) ION, ...
著者Lira-Navarrete, E, Iglesias-Fernandez, J, Zandberg, W.F, Companon, I, Kong, Y, Corzana, F, Pinto, B.M, Clausen, H, Peregrina, J.M, Vocadlo, D, Rovira, C, Hurtado-Guerrero, R.
登録日2014-04-30
公開日2014-05-28
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (2.45 Å)
主引用文献Substrate-Guided Front-Face Reaction Revealed by Combined Structural Snapshots and Metadynamics for the Polypeptide N-Acetylgalactosaminyltransferase 2.
Angew.Chem.Int.Ed.Engl., 53, 2014
6DPX
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X-ray crystal structure of AmpC beta-lactamase with inhibitor
分子名称: (3-{[(3-chloro-2-hydroxyphenyl)sulfonyl]amino}phenyl)acetic acid, Beta-lactamase
著者Singh, I.
登録日2018-06-09
公開日2018-07-04
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Ultra-large library docking for discovering new chemotypes.
Nature, 566, 2019
7VEI
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Neutron structure of D2O-solvent lysozyme
分子名称: CHLORIDE ION, Lysozyme C, NICKEL (II) ION
著者Chatake, T, Tanaka, I, Kusaka, K, Fujiwara, S.
登録日2021-09-08
公開日2022-04-06
最終更新日2023-11-29
実験手法NEUTRON DIFFRACTION (2 Å)
主引用文献Protonation states of hen egg-white lysozyme observed using D/H contrast neutron crystallography.
Acta Crystallogr D Struct Biol, 78, 2022
2DSR
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Structural Basis for the Inhibition of Insulin-like Growth Factors by IGF Binding Proteins
分子名称: Insulin-like growth factor IB, Insulin-like growth factor-binding protein 4
著者Sitar, T, Popowicz, G.M, Siwanowicz, I, Huber, R, Holak, T.A.
登録日2006-07-05
公開日2006-08-22
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Structural basis for the inhibition of insulin-like growth factors by insulin-like growth factor-binding proteins.
Proc.Natl.Acad.Sci.Usa, 103, 2006

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件を2024-08-07に公開中

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