Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 17938 件

1VYQ
DownloadVisualize
BU of 1vyq by Molmil
Novel inhibitors of Plasmodium Falciparum dUTPase provide a platform for anti-malarial drug design
分子名称: 2,3-DEOXY-3-FLUORO-5-O-TRITYLURIDINE, DEOXYURIDINE 5'-TRIPHOSPHATE NUCLEOTIDOHYDROLASE
著者Whittingham, J.L, Leal, I, Kasinathan, G, Nguyen, C, Bell, E, Jones, A.F, Berry, C, Benito, A, Turkenburg, J.P, Dodson, E.J, Ruiz Perez, L.M, Wilkinson, A.J, Johansson, N.G, Brun, R, Gilbert, I.H, Gonzalez Pacanowska, D, Wilson, K.S.
登録日2004-05-05
公開日2005-05-26
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Dutpase as a Platform for Antimalarial Drug Design: Structural Basis for the Selectivity of a Class of Nucleoside Inhibitors.
Structure, 13, 2005
2QCP
DownloadVisualize
BU of 2qcp by Molmil
1.0 A Structure of CusF-Ag(I) residues 10-88 from Escherichia coli
分子名称: Cation efflux system protein cusF, NITRATE ION, SILVER ION, ...
著者Loftin, I.R.
登録日2007-06-19
公開日2007-10-02
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1 Å)
主引用文献Unusual Cu(I)/Ag(I) coordination of Escherichia coli CusF as revealed by atomic resolution crystallography and X-ray absorption spectroscopy
Protein Sci., 16, 2007
7O5E
DownloadVisualize
BU of 7o5e by Molmil
The structure of an i-motif/duplex junction at neutral pH
分子名称: I-motif/duplex junction (IDJ)
著者Serrano-Chacon, I, Mir, B, Escaja, N, Gonzalez, C.
登録日2021-04-08
公開日2021-09-01
最終更新日2024-06-19
実験手法SOLUTION NMR
主引用文献Structure of i-Motif/Duplex Junctions at Neutral pH.
J.Am.Chem.Soc., 143, 2021
5WAU
DownloadVisualize
BU of 5wau by Molmil
Crystal Structure of CO-bound Cytochrome c Oxidase determined by Synchrotron X-Ray Crystallography at 100 K
分子名称: (1R)-2-{[{[(2S)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-1-[(PALMITOYLOXY)METHYL]ETHYL (11E)-OCTADEC-11-ENOATE, (1S)-2-{[(2-AMINOETHOXY)(HYDROXY)PHOSPHORYL]OXY}-1-[(STEAROYLOXY)METHYL]ETHYL (5E,8E,11E,14E)-ICOSA-5,8,11,14-TETRAENOATE, (7R,17E,20E)-4-HYDROXY-N,N,N-TRIMETHYL-9-OXO-7-[(PALMITOYLOXY)METHYL]-3,5,8-TRIOXA-4-PHOSPHAHEXACOSA-17,20-DIEN-1-AMINIUM 4-OXIDE, ...
著者Fromme, R, Ishigami, I, Yeh, S.Y, Zatsepin, N, Grant, T, Fromme, P, Rousseau, D.
登録日2017-06-27
公開日2017-08-09
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献Crystal structure of CO-bound cytochrome c oxidase determined by serial femtosecond X-ray crystallography at room temperature.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
4E36
DownloadVisualize
BU of 4e36 by Molmil
Crystal structure of the human Endoplasmic Reticulum Aminopeptidase 2 variant N392K
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Birtley, J.R, Saridakis, E, Pegias, P, Stratikos, E, Mavridis, I.M.
登録日2012-03-09
公開日2012-08-29
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (3.22 Å)
主引用文献A common single nucleotide polymorphism in endoplasmic reticulum aminopeptidase 2 induces a specificity switch that leads to altered antigen processing.
J.Immunol., 189, 2012
2FRB
DownloadVisualize
BU of 2frb by Molmil
NMR structure of the alpha-conotoxin GI (ASN4)-benzoylphenylalanine derivative
分子名称: Alpha-conotoxin GIA
著者Pashkov, V.S, Maslennikov, I, Kasheverov, I.V, Zhmak, M.N, Utkin, Y.N, Tsetlin, V.I, Arseniev, A.S.
登録日2006-01-19
公開日2006-05-30
最終更新日2023-11-15
実験手法SOLUTION NMR
主引用文献Alpha-Conotoxin GI benzoylphenylalanine derivatives. (1)H-NMR structures and photoaffinity labeling of the Torpedo californica nicotinic acetylcholine receptor.
Febs J., 273, 2006
4DP8
DownloadVisualize
BU of 4dp8 by Molmil
The 1.07 Angstrom crystal structure of reduced (CuI) poplar plastocyanin A at pH 4.0
分子名称: COPPER (I) ION, Plastocyanin A, chloroplastic, ...
著者Kachalova, G.S, Shosheva, A.H, Bourenkov, G.P, Donchev, A.A, Dimitrov, M.I, Bartunik, H.D.
登録日2012-02-13
公開日2013-02-13
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.07 Å)
主引用文献Structural comparison of the poplar plastocyanin isoforms PCa and PCb sheds new light on the role of the copper site geometry in interactions with redox partners in oxygenic photosynthesis.
J.Inorg.Biochem., 115, 2012
4V3N
DownloadVisualize
BU of 4v3n by Molmil
Membrane bound pleurotolysin prepore (TMH2 strand lock) trapped with engineered disulphide cross-link
分子名称: PLEUROTOLYSIN A, PLEUROTOLYSIN B
著者Lukoyanova, N, Kondos, S.C, Farabella, I, Law, R.H.P, Reboul, C.F, Caradoc-Davies, T.T, Spicer, B.A, Kleifeld, O, Perugini, M, Ekkel, S, Hatfaludi, T, Oliver, K, Hotze, E.M, Tweten, R.K, Whisstock, J.C, Topf, M, Dunstone, M.A, Saibil, H.R.
登録日2014-10-20
公開日2015-02-18
最終更新日2024-05-08
実験手法ELECTRON MICROSCOPY (14 Å)
主引用文献Conformational Changes During Pore Formation by the Perforin-Related Protein Pleurotolysin.
Plos Biol., 13, 2015
6OFB
DownloadVisualize
BU of 6ofb by Molmil
Crystal structure of human glutamine-dependent NAD+ synthetase complexed with NaAD+, AMP, pyrophosphate, and Mg2+
分子名称: ADENOSINE MONOPHOSPHATE, CHLORIDE ION, Glutamine-dependent NAD(+) synthetase, ...
著者Chuenchor, W, Doukov, T.I, Gerratana, B.
登録日2019-03-28
公開日2020-01-08
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.84 Å)
主引用文献Different ways to transport ammonia in human and Mycobacterium tuberculosis NAD+synthetases.
Nat Commun, 11, 2020
6OFM
DownloadVisualize
BU of 6ofm by Molmil
Crystal structure of green fluorescent protein (GFP); S65T, Y66(3-CH3Y); ih circular permutant (50-51)
分子名称: Green fluorescent protein (GFP); S65T, Y66(3-CH3Y); ih circular permutant (50-51)
著者Lin, C.-Y, Romei, M.G, Mathews, I.I, Boxer, S.G.
登録日2019-03-31
公開日2019-07-10
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.48 Å)
主引用文献Unified Model for Photophysical and Electro-Optical Properties of Green Fluorescent Proteins.
J.Am.Chem.Soc., 141, 2019
4WW1
DownloadVisualize
BU of 4ww1 by Molmil
Crystal structure of human TCR Alpha Chain-TRAV21-TRAJ8 and Beta Chain-TRBV7-8
分子名称: TCR Alpha Chain-TRAV21-TRAJ8, TCR Beta Chain-TRBV7-8
著者Le Nours, J, Praveena, T, Pellicci, D.G, Lim, R.T, Besra, G, Howell, A.R, Godfrey, D.I, Rossjohn, J, Uldrich, A.P.
登録日2014-11-10
公開日2016-02-03
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.38 Å)
主引用文献Atypical natural killer T-cell receptor recognition of CD1d-lipid antigens.
Nat Commun, 7, 2016
4DPA
DownloadVisualize
BU of 4dpa by Molmil
The 1.05 Angstrom crystal structure of reduced (CuI) poplar plastocyanin A at pH 6.0
分子名称: COPPER (I) ION, Plastocyanin A, chloroplastic
著者Kachalova, G.S, Shosheva, A.H, Bourenkov, G.P, Donchev, A.A, Dimitrov, M.I, Bartunik, H.D.
登録日2012-02-13
公開日2013-02-13
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.05 Å)
主引用文献Structural comparison of the poplar plastocyanin isoforms PCa and PCb sheds new light on the role of the copper site geometry in interactions with redox partners in oxygenic photosynthesis.
J.Inorg.Biochem., 115, 2012
4DYM
DownloadVisualize
BU of 4dym by Molmil
Crystal structure of the ACVR1 kinase domain in complex with the imidazo[1,2-b]pyridazine inhibitor K00135
分子名称: 1-(3-{6-[(CYCLOPROPYLMETHYL)AMINO]IMIDAZO[1,2-B]PYRIDAZIN-3-YL}PHENYL)ETHANONE, Activin receptor type-1, GLYCEROL, ...
著者Chaikuad, A, Sanvitale, C, Cooper, C, Canning, P, Mahajan, P, Daga, N, Petrie, K, Alfano, I, Gileadi, O, Fedorov, O, Krojer, T, Filippakopoulos, P, Muniz, J.R.C, von Delft, F, Weigelt, J, Arrowsmith, C.H, Edwards, A.M, Bountra, C, Bullock, A, Structural Genomics Consortium (SGC)
登録日2012-02-29
公開日2012-03-21
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (2.42 Å)
主引用文献Crystal structure of the ACVR1 kinase domain in complex with the imidazo[1,2-b]pyridazine inhibitor K00135
To be Published
6O9M
DownloadVisualize
BU of 6o9m by Molmil
Structure of the human apo TFIIH
分子名称: CDK-activating kinase assembly factor MAT1, General transcription factor IIH subunit 1, General transcription factor IIH subunit 2, ...
著者Yan, C.L, Dodd, T, He, Y, Tainer, J.A, Tsutakawa, S.E, Ivanov, I.
登録日2019-03-14
公開日2019-05-29
最終更新日2024-03-13
実験手法ELECTRON MICROSCOPY (4.4 Å)
主引用文献Transcription preinitiation complex structure and dynamics provide insight into genetic diseases.
Nat.Struct.Mol.Biol., 26, 2019
4URE
DownloadVisualize
BU of 4ure by Molmil
Molecular Genetic and Crystal Structural Analysis of 1-(4- Hydroxyphenyl)-Ethanol Dehydrogenase from Aromatoleum aromaticum EbN1
分子名称: 3-PYRIDINIUM-1-YLPROPANE-1-SULFONATE, ACETATE ION, CYCLOHEXANOL DEHYDROGENASE, ...
著者Buesing, I, Hoeffken, H.W, Breuer, M, Woehlbrand, L, Hauer, B, Rabus, R.
登録日2014-06-28
公開日2015-07-08
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Molecular Genetic and Crystal Structural Analysis of 1-(4-Hydroxyphenyl)-Ethanol Dehydrogenase from 'Aromatoleum Aromaticum' Ebn1.
J.Mol.Microbiol.Biotechnol., 25, 2015
1MMF
DownloadVisualize
BU of 1mmf by Molmil
Crystal structure of substrate free form of glycerol dehydratase
分子名称: COBALAMIN, POTASSIUM ION, glycerol dehydrase alpha subunit, ...
著者Liao, D.I, Dotson, G, Turner, I, Reiss, L, Emptage, M.
登録日2002-09-03
公開日2003-06-10
最終更新日2024-02-14
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Crystal structure of substrate free form of glycerol dehydratase
J.Inorg.Biochem., 93, 2003
2FJS
DownloadVisualize
BU of 2fjs by Molmil
Crystal Structure of Anaerobically Reduced Wild Type Nitrite Reductase from A. faecalis
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ACETATE ION, COPPER (I) ION, ...
著者Tocheva, E.I, Murphy, M.E.P.
登録日2006-01-03
公開日2006-11-21
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Effect of the methionine ligand on the reorganization energy of the type-1 copper site of nitrite reductase.
J.Am.Chem.Soc., 129, 2007
4E1H
DownloadVisualize
BU of 4e1h by Molmil
Fragment of human prion protein
分子名称: CITRIC ACID, FE (III) ION, Major prion protein
著者Apostol, M.I, Perry, K, Surewicz, W.K.
登録日2012-03-06
公開日2013-03-06
最終更新日2017-11-15
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献Crystal structure of a human prion protein fragment reveals a motif for oligomer formation.
J.Am.Chem.Soc., 135, 2013
4V0H
DownloadVisualize
BU of 4v0h by Molmil
Human metallo beta lactamase domain containing protein 1 (hMBLAC1)
分子名称: FE (III) ION, GLYCEROL, METALLO-BETA-LACTAMASE DOMAIN-CONTAINING PROTEIN 1 1
著者Pettinati, I, McDonough, M.A, Brem, J, Schofield, C.J.
登録日2014-09-16
公開日2016-01-13
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.79 Å)
主引用文献Biosynthesis of histone messenger RNA employs a specific 3' end endonuclease.
Elife, 7, 2018
1VE0
DownloadVisualize
BU of 1ve0 by Molmil
Crystal structure of uncharacterized protein ST2072 from Sulfolobus tokodaii
分子名称: SULFATE ION, ZINC ION, hypothetical protein (ST2072)
著者Tanabe, E, Horiike, Y, Tsumoto, K, Yasutake, Y, Yao, M, Tanaka, I, Kumagai, I.
登録日2004-03-26
公開日2005-03-22
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Crystal structure of the uncharacterized protein ST2072 from Sulfolobus tokodaii
To be Published
6ZMK
DownloadVisualize
BU of 6zmk by Molmil
Crystal structure of human GFAT-1 L405R
分子名称: GLUCOSE-6-PHOSPHATE, GLUTAMIC ACID, Glutamine--fructose-6-phosphate aminotransferase [isomerizing] 1
著者Ruegenberg, S, Mayr, F, Miethe, S, Atanassov, I, Baumann, U, Denzel, M.S.
登録日2020-07-02
公開日2020-08-05
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2.382 Å)
主引用文献Protein kinase A controls the hexosamine pathway by tuning the feedback inhibition of GFAT-1.
Nat Commun, 12, 2021
1W6P
DownloadVisualize
BU of 1w6p by Molmil
X-RAY CRYSTAL STRUCTURE OF C2S HUMAN GALECTIN-1 COMPLEXED WITH N- Acetyl-LACTOSAMINE
分子名称: BETA-MERCAPTOETHANOL, GALECTIN-1, SULFATE ION, ...
著者Lopez-Lucendo, M.I.F, Gabius, H.J, Romero, A.
登録日2004-08-20
公開日2004-10-20
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Growth-Regulatory Human Galectin-1: Crystallographic Characterisation of the Structural Changes Induced by Single-Site Mutations and Their Impact on the Thermodynamics of Ligand Binding
J.Mol.Biol., 343, 2004
7A58
DownloadVisualize
BU of 7a58 by Molmil
NOE-only solution structure of the Iron-Sulfur protein PioC from Rhodopseudomonas palustris TIE-1
分子名称: IRON/SULFUR CLUSTER, PioC
著者Cantini, F, Trindade, I.
登録日2020-08-20
公開日2020-11-11
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献PRE-driven protein NMR structures: an alternative approach in highly paramagnetic systems.
Febs J., 288, 2021
5WCK
DownloadVisualize
BU of 5wck by Molmil
Native FEZ-1 metallo-beta-lactamase from Legionella gormanii
分子名称: FEZ-1 protein, GLYCEROL, SULFATE ION, ...
著者Garcia-Saez, I, Mercuri, P.S, Kahn, R, Papamicael, C, Shabalin, I.G, Raczynska, J.E, Jaskolski, M, Minor, W, Frere, J.M, Galleni, M, Dideberg, O.
登録日2017-06-30
公開日2018-06-20
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.65 Å)
主引用文献Three-dimensional structure of FEZ-1, a monomeric subclass B3 metallo-beta-lactamase from Fluoribacter gormanii, in native form and in complex with D-captopril.
J. Mol. Biol., 325, 2003
5E8P
DownloadVisualize
BU of 5e8p by Molmil
The structure of the TEIPP associated altered peptide ligand Trh4-p5NLE in complex with H-2D(b)
分子名称: Beta-2-microglobulin, Ceramide synthase 5, H-2 class I histocompatibility antigen, ...
著者Hafstrand, I, Doorduijn, E, Duru, A.D, Buratto, J, Oliveira, C.C, Sandalova, T, van Hall, T, Achour, A.
登録日2015-10-14
公開日2016-02-03
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献The MHC Class I Cancer-Associated Neoepitope Trh4 Linked with Impaired Peptide Processing Induces a Unique Noncanonical TCR Conformer.
J Immunol., 196, 2016

225946

件を2024-10-09に公開中

PDB statisticsPDBj update infoContact PDBjnumon