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PDB: 17892 件

4K6O
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X-ray structure uridine phosphorylase from Vibrio cholerae in complex with 6-methyluracil at 1.17 A resolution
分子名称: 1,2-ETHANEDIOL, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 6-methylpyrimidine-2,4-diol, ...
著者Prokofev, I.I, Lashkov, A.A, Gabdoulkhakov, A.G, Betzel, C, Mikhailov, A.M.
登録日2013-04-16
公開日2014-05-07
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (1.17 Å)
主引用文献Crystallization and preliminary X-ray study of Vibrio cholerae uridine phosphorylase in complex with 6-methyluracil.
Acta Crystallogr.,Sect.F, 70, 2014
5L1G
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AMPA subtype ionotropic glutamate receptor GluA2 in complex with GYKI-Br
分子名称: (8R)-5-(4-amino-3-bromophenyl)-N,8-dimethyl-8,9-dihydro-2H,7H-[1,3]dioxolo[4,5-h][2,3]benzodiazepine-7-carboxamide, 2-acetamido-2-deoxy-beta-D-glucopyranose, Glutamate receptor 2
著者Yelshanskaya, M.V, Singh, A.K, Sampson, J.M, Sobolevsky, A.I.
登録日2016-07-29
公開日2016-10-19
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (4.507 Å)
主引用文献Structural Bases of Noncompetitive Inhibition of AMPA-Subtype Ionotropic Glutamate Receptors by Antiepileptic Drugs.
Neuron, 91, 2016
3MBS
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Crystal structure of 8mer PNA
分子名称: 1,2-ETHANEDIOL, Peptide Nucleic Acid
著者Yeh, J.I, Pohl, E, Truan, D, He, W, Sheldrick, G.M, Achim, C.
登録日2010-03-26
公開日2011-03-30
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.27 Å)
主引用文献The crystal structure of non-modified and bipyridine-modified PNA duplexes.
Chemistry, 16, 2010
5FN0
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Crystal structure of Pseudomonas fluorescens kynurenine-3- monooxygenase (KMO) in complex with GSK180
分子名称: 3-(5,6-DICHLORO-2-OXOBENZO[D]OXAZOL-3(2H)-YL)PROPANOIC ACID, FLAVIN-ADENINE DINUCLEOTIDE, KYNURENINE 3-MONOOXYGENASE
著者Mole, D.J, Webster, S.P, Uings, I, Zheng, X, Binnie, M, Wilson, K, Hutchinson, J.P, Mirguet, O, Walker, A, Beaufils, B, Ancellin, N, Trottet, L, Beneton, V, Mowat, C.G, Wilkinson, M, Rowland, P, Haslam, C, McBride, A, Homer, N.Z.M, Baily, J.E, Sharp, M.G.F, Garden, O.J, Hughes, J, Howie, S.E.M, Holmes, D, Liddle, J, Iredale, J.P.
登録日2015-11-10
公開日2016-01-13
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (3.19 Å)
主引用文献Kynurenine-3-Monooxygenase Inhibition Prevents Multiple Organ Failure in Rodent Models of Acute Pancreatitis.
Nat.Med. (N.Y.), 22, 2016
2PNA
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STRUCTURE OF AN SH2 DOMAIN OF THE P85 ALPHA SUBUNIT OF PHOSPHATIDYLINOSITOL-3-OH KINASE
分子名称: PHOSPHATIDYLINOSITOL 3-KINASE P85-ALPHA SUBUNIT N-TERMINAL SH2 DOMAIN
著者Booker, G.W, Breeze, A.L, Downing, A.K, Panayotou, G, Gout, I, Waterfield, M.D, Campbell, I.D.
登録日1992-06-30
公開日1994-01-31
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Structure of an SH2 domain of the p85 alpha subunit of phosphatidylinositol-3-OH kinase.
Nature, 358, 1992
3MF1
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Crystal structure of class II aaRS homologue (Bll0957) complexed with an analogue of glycyl adenylate
分子名称: 5'-O-(glycylsulfamoyl)adenosine, Bll0957 protein, ZINC ION
著者Weygand-Durasevic, I, Mocibob, M, Ivic, N, Bilokapic, S, Maier, T, Luic, M, Ban, N.
登録日2010-04-01
公開日2010-07-28
最終更新日2017-11-08
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Homologs of aminoacyl-tRNA synthetases acylate carrier proteins and provide a link between ribosomal and nonribosomal peptide synthesis
Proc.Natl.Acad.Sci.USA, 107, 2010
5L91
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The 2.2 A crystal structure of CYP109E1 from Bacillus megaterium bound with four corticosterone molecules
分子名称: CORTICOSTERONE, Cytochrome P450, PROTOPORPHYRIN IX CONTAINING FE
著者Jozwik, I.K, Thunnissen, A.M.W.H.
登録日2016-06-09
公開日2016-10-05
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structural basis of steroid binding and oxidation by the cytochrome P450 CYP109E1 from Bacillus megaterium.
Febs J., 283, 2016
1A3A
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BU of 1a3a by Molmil
CRYSTAL STRUCTURE OF IIA MANNITOL FROM ESCHERICHIA COLI
分子名称: MANNITOL-SPECIFIC EII
著者Van Montfort, R.L.M, Pijning, T, Kalk, K.H, Hangyi, I, Kouwijzer, M.L.C.E, Robillard, G.T, Dijkstra, B.W.
登録日1998-01-19
公開日1998-08-12
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献The structure of the Escherichia coli phosphotransferase IIAmannitol reveals a novel fold with two conformations of the active site.
Structure, 6, 1998
7VQ0
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Cryo-EM structure of the SARS-CoV-2 spike protein (2-up RBD) bound to neutralizing nanobodies P86
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Maeda, R, Fujita, J, Konishi, Y, Kazuma, Y, Yamazaki, H, Anzai, I, Yamaguchi, K, Kasai, K, Nagata, K, Yamaoka, Y, Miyakawa, K, Ryo, A, Shirakawa, K, Makino, F, Matsuura, Y, Inoue, T, Imura, A, Namba, K, Takaori-Kondo, A.
登録日2021-10-18
公開日2022-07-20
実験手法ELECTRON MICROSCOPY (3.03 Å)
主引用文献A panel of nanobodies recognizing conserved hidden clefts of all SARS-CoV-2 spike variants including Omicron.
Commun Biol, 5, 2022
3E1Z
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Crystal structure of the parasite protesase inhibitor chagasin in complex with papain
分子名称: ACETIC ACID, Chagasin, FORMIC ACID, ...
著者Redzynia, I, Bujacz, G, Bujacz, A, Ljunggren, A, Abrahamson, M, Jaskolski, M.
登録日2008-08-05
公開日2009-01-27
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (1.86 Å)
主引用文献Crystal structure of the parasite inhibitor chagasin in complex with papain allows identification of structural requirements for broad reactivity and specificity determinants for target proteases.
Febs J., 276, 2009
5HSA
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Alcohol Oxidase AOX1 from Pichia Pastoris
分子名称: ARABINO-FLAVIN-ADENINE DINUCLEOTIDE, Alcohol oxidase 1, CALCIUM ION, ...
著者Neumann, P, Ficner, R, Feussner, I, Koch, C.
登録日2016-01-25
公開日2016-03-09
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献Crystal Structure of Alcohol Oxidase from Pichia pastoris.
Plos One, 11, 2016
2PW0
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crystal structure of trans-aconitate bound to methylaconitate isomerase PrpF from Shewanella oneidensis
分子名称: 1,2-ETHANEDIOL, PrpF methylaconitate isomerase, TRICARBALLYLIC ACID
著者Garvey, G.S, Rayment, I.R.
登録日2007-05-10
公開日2007-08-21
最終更新日2024-02-21
実験手法X-RAY DIFFRACTION (1.57 Å)
主引用文献The three-dimensional crystal structure of the PrpF protein of Shewanella oneidensis complexed with trans-aconitate: insights into its biological function.
Protein Sci., 16, 2007
15C8
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CATALYTIC ANTIBODY 5C8, FREE FAB
分子名称: IGG 5C8 FAB (HEAVY CHAIN), IGG 5C8 FAB (LIGHT CHAIN)
著者Gruber, K, Wilson, I.A.
登録日1998-03-18
公開日1999-03-23
最終更新日2023-08-02
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Ligand-Induced Conformational Changes in a Catalytic Antibody: Comparison of the Bound and Unbound Structure of Fab 5C8
To be Published
5HW1
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Crystal structure of TEM1 beta-lactamase in the presence of 1.2 MPa xenon
分子名称: Beta-lactamase TEM, XENON
著者Roose, B.W, Dmochowski, I.J.
登録日2016-01-28
公開日2017-06-28
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献A Structural Basis for129Xe Hyper-CEST Signal in TEM-1 beta-Lactamase.
Chemphyschem, 2018
5KV9
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BU of 5kv9 by Molmil
Crystal structure of a hPIV haemagglutinin-neuraminidase-inhibitor complex
分子名称: 1,2-ETHANEDIOL, 2,6-anhydro-3,4,5-trideoxy-5-[(2-methylpropanoyl)amino]-4-(4-phenyl-1H-1,2,3-triazol-1-yl)-D-glycero-D-galacto-non-2-en onic acid, 2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Dirr, L, El-Deeb, I.M, Chavas, L.M.G, Guillon, P, von Itzstein, M.
登録日2016-07-13
公開日2017-07-12
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献The impact of the butterfly effect on human parainfluenza virus haemagglutinin-neuraminidase inhibitor design.
Sci Rep, 7, 2017
3ZK0
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The crystal structure of a Cu(I) metallochaperone from Streptomyces lividans in its apo form
分子名称: SCO3965
著者Blundell, K.L.I.M, Hough, M, Worrall, J.A.R.
登録日2013-01-21
公開日2014-01-29
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Structural and Mechanistic Insights Into an Extracytoplasmic Copper Trafficking Pathway in Streptomyces Lividans.
Biochem.J., 459, 2014
4L2D
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X-ray structure of the Fe(II) form of the iron superoxide dismutase from Pseudoalteromonas haloplanktis
分子名称: FE (II) ION, Superoxide dismutase [Fe], alpha-D-glucopyranose-(1-1)-alpha-D-glucopyranose
著者Russo Krauss, I, Merlino, A, Sica, F.
登録日2013-06-04
公開日2014-02-26
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.07 Å)
主引用文献Structural and denaturation studies of two mutants of a cold adapted superoxide dismutase point to the importance of electrostatic interactions in protein stability.
Biochim.Biophys.Acta, 1844, 2014
1WCE
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Crystal structure of the T13 IBDV viral particle reveals a missing link in icosahedral viruses evolution
分子名称: MAJOR STRUCTURAL PROTEIN VP2
著者Coulibaly, F, Chevalier, C, Gutsche, I, Pous, J, Bressanelli, S, Navaza, J, Delmas, B, Rey, F.A.
登録日2004-11-12
公開日2005-04-06
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (7 Å)
主引用文献The Birnavirus Crystal Structure Reveals Structural Relationships Among Icosahedral Viruses.
Cell(Cambridge,Mass.), 120, 2005
1AMS
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X-RAY CRYSTALLOGRAPHIC STUDY OF PYRIDOXAMINE 5'-PHOSPHATE-TYPE ASPARTATE AMINOTRANSFERASES FROM ESCHERICHIA COLI IN THREE FORMS
分子名称: 4'-DEOXY-4'-AMINOPYRIDOXAL-5'-PHOSPHATE, ASPARTATE AMINOTRANSFERASE, GLUTARIC ACID
著者Miyahara, I, Hirotsu, K, Hayashi, H, Kagamiyama, H.
登録日1994-07-01
公開日1994-09-30
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献X-ray crystallographic study of pyridoxamine 5'-phosphate-type aspartate aminotransferases from Escherichia coli in three forms.
J.Biochem.(Tokyo), 116, 1994
1ACY
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CRYSTAL STRUCTURE OF THE PRINCIPAL NEUTRALIZING SITE OF HIV-1
分子名称: HIV-1 GP120 (MN ISOLATE), IGG1-KAPPA 59.1 FAB (HEAVY CHAIN), IGG1-KAPPA 59.1 FAB (LIGHT CHAIN)
著者Ghiara, J.B, Wilson, I.A.
登録日1994-02-10
公開日1994-07-31
最終更新日2024-06-05
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Crystal structure of the principal neutralization site of HIV-1.
Science, 264, 1994
2F9L
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3D structure of inactive human Rab11b GTPase
分子名称: GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, RAB11B, ...
著者Scapin, S.M.N, Guimaraes, B.G, Zanchin, N.I.T.
登録日2005-12-06
公開日2006-04-04
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献The crystal structure of the small GTPase Rab11b reveals critical differences relative to the Rab11a isoform.
J.Struct.Biol., 154, 2006
5I2A
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1,2-propanediol Dehydration in Roseburia inulinivorans; Structural Basis for Substrate and Enantiomer Selectivity
分子名称: 1,2-ETHANEDIOL, DI(HYDROXYETHYL)ETHER, Diol-dehydratase
著者LaMattina, J.W, Reitzer, P, Kapoor, S, Galzerani, F, Koch, D.J, Gouvea, I.E, Lanzilotta, W.N.
登録日2016-02-08
公開日2016-06-01
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献1,2-Propanediol Dehydration in Roseburia inulinivorans: STRUCTURAL BASIS FOR SUBSTRATE AND ENANTIOMER SELECTIVITY.
J.Biol.Chem., 291, 2016
8P8T
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Ex vivo Ym2 crystal structure
分子名称: Chitinase-like protein 4, GLYCEROL
著者Verschueren, K.H.G, Verstraete, K, Heyndrickx, I, Smole, U, Aegerter, H, Savvides, S.N, Lambrecht, B.N.
登録日2023-06-02
公開日2024-01-17
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.71 Å)
主引用文献Ym1 protein crystals promote type 2 immunity.
Elife, 12, 2024
8P8Q
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Recombinant Ym1 crystal structure
分子名称: ACETATE ION, Chitinase-like protein 3, GLYCEROL
著者Verschueren, K.H.G, Verstraete, K, Heyndrickx, I, Aegerter, H, Smole, U, Savvides, S.N, Lambrecht, B.N.
登録日2023-06-02
公開日2024-01-17
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.792 Å)
主引用文献Ym1 protein crystals promote type 2 immunity.
Elife, 12, 2024
8P8S
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Recombinant Ym2 crystal structure
分子名称: 1,2-ETHANEDIOL, Chitinase-like protein 4
著者Verschueren, K.H.G, Verstraete, K, Heyndrickx, I, Smole, U, Aegerter, A, Savvides, S.N, Lambrecht, B.N.
登録日2023-06-02
公開日2024-01-17
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.17 Å)
主引用文献Ym1 protein crystals promote type 2 immunity.
Elife, 12, 2024

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