Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 17801 件

7QQ8
DownloadVisualize
BU of 7qq8 by Molmil
Structure of E.coli Class 2 L-asparaginase EcAIII, mutant RDM1-8 (G206Y, R207Q, D210P, S211T)
分子名称: Beta-aspartyl-peptidase, CHLORIDE ION, SODIUM ION
著者Loch, J.I, Kadziolka, K, Jaskolski, M.
登録日2022-01-06
公開日2022-07-13
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Structural and biophysical studies of new L-asparaginase variants: lessons from random mutagenesis of the prototypic Escherichia coli Ntn-amidohydrolase.
Acta Crystallogr D Struct Biol, 78, 2022
6WVW
DownloadVisualize
BU of 6wvw by Molmil
Crystal structure of the R59P-SNAP25 containing SNARE complex
分子名称: (4S)-2-METHYL-2,4-PENTANEDIOL, CALCIUM ION, Synaptosomal-associated protein 25, ...
著者Zhou, Q, White, K.I, Brunger, A.T.
登録日2020-05-07
公開日2021-03-17
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.11 Å)
主引用文献Role of Aberrant Spontaneous Neurotransmission in SNAP25-Associated Encephalopathies.
Neuron, 109, 2021
1QIQ
DownloadVisualize
BU of 1qiq by Molmil
ISOPENICILLIN N SYNTHASE FROM ASPERGILLUS NIDULANS (ACmC Fe COMPLEX)
分子名称: FE (III) ION, ISOPENICILLIN N SYNTHASE, N-[N-[2-AMINO-6-OXO-HEXANOIC ACID-6-YL]CYSTEINYL]-S-METHYLCYSTEINE, ...
著者Rutledge, P.J, Clifton, I.J, Burzlaff, N.I, Roach, P.L, Adlington, R.M, Baldwin, J.E.
登録日1999-06-15
公開日2000-06-16
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献The Reaction Cycle of Isopenicillin N Synthase Observed by X-Ray Diffraction.
Nature, 401, 1999
1QJF
DownloadVisualize
BU of 1qjf by Molmil
ISOPENICILLIN N SYNTHASE FROM ASPERGILLUS NIDULANS (Monocyclic Sulfoxide - Fe COMPLEX)
分子名称: 1-[(1S)-CARBOXY-2-(METHYLSULFINYL)ETHYL]-(3R)-[(5S)-5-AMINO-5-CARBOXYPENTANAMIDO]-(4R)-SULFANYLAZETIDIN-2-ONE, FE (II) ION, ISOPENICILLIN N SYNTHASE, ...
著者Rutledge, P.J, Clifton, I.J, Burzlaff, N.I, Roach, P.L, Adlington, R.M, Baldwin, J.E.
登録日1999-06-23
公開日2000-06-29
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献The Reaction Cycle of Isopenicillin N Synthase Observed by X-Ray Diffraction
Nature, 401, 1999
6TVV
DownloadVisualize
BU of 6tvv by Molmil
Crystal structure of 3'-5' RecJ exonuclease from M. Jannaschii
分子名称: GLYCEROL, MANGANESE (II) ION, MjaRecJ
著者De March, M, Medagli, B, Krastanova, I, Saha, I, Pisani, F, Onesti, S.
登録日2020-01-10
公開日2021-01-27
最終更新日2024-05-15
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Crystal structure of 3'-5' RecJ exonuclease from M. Jannaschii
To Be Published
1QJE
DownloadVisualize
BU of 1qje by Molmil
Isopenicillin N synthase from Aspergillus nidulans (IP1 - Fe complex)
分子名称: FE (II) ION, ISOPENICILLIN N, ISOPENICILLIN N SYNTHASE, ...
著者Burzlaff, N.I, Clifton, I.J, Rutledge, P.J, Roach, P.L, Adlington, R.M, Baldwin, J.E.
登録日1999-06-23
公開日2000-06-29
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.35 Å)
主引用文献The Reaction Cycle of Isopenicillin N Synthase Observed by X-Ray Diffraction
Nature, 401, 1999
6WPM
DownloadVisualize
BU of 6wpm by Molmil
Crystal structure of a putative oligosaccharide periplasmic-binding protein from Synechococcus sp. MITs9220 in complex with zinc
分子名称: 1,2-ETHANEDIOL, GLYCEROL, SULFATE ION, ...
著者Ford, B.A, Michie, K.A, Paulsen, I.T, Mabbutt, B.C, Shah, B.S.
登録日2020-04-27
公開日2021-05-12
最終更新日2022-04-27
実験手法X-RAY DIFFRACTION (2.88 Å)
主引用文献Novel functional insights into a modified sugar-binding protein from Synechococcus MITS9220.
Sci Rep, 12, 2022
5VXZ
DownloadVisualize
BU of 5vxz by Molmil
High-affinity AXL decoy receptor
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, CHLORIDE ION, ...
著者Mathrews, I.I, Kapur, S, Kariolis, M.S, Cochran, J.R.
登録日2017-05-24
公開日2017-06-21
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Inhibition of the GAS6/AXL pathway augments the efficacy of chemotherapies.
J. Clin. Invest., 127, 2017
6WPY
DownloadVisualize
BU of 6wpy by Molmil
Crystal structure of Bacillus licheniformis lipase BlEst2 in mature form
分子名称: BlEst2
著者Nakamura, A.M, Godoy, A.S, Kadowaki, M.A.S, Polikarpov, I.
登録日2020-04-28
公開日2021-06-09
最終更新日2024-08-07
実験手法X-RAY DIFFRACTION (3.6 Å)
主引用文献Structures of BlEst2 from Bacillus licheniformis in its propeptide and mature forms reveal autoinhibitory effects of the C-terminal domain
Febs J., n/a, 2024
7QXT
DownloadVisualize
BU of 7qxt by Molmil
ATAD2 in complex with FragLite10
分子名称: 1,2-ETHANEDIOL, 6-bromo-1,3-dihydro-2H-indol-2-one, ATPase family AAA domain-containing protein 2, ...
著者Turberville, S, Martin, M.P, Hope, I, Noble, M.E.M.
登録日2022-01-27
公開日2022-11-23
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.51 Å)
主引用文献Mapping Ligand Interactions of Bromodomains BRD4 and ATAD2 with FragLites and PepLites─Halogenated Probes of Druglike and Peptide-like Molecular Interactions.
J.Med.Chem., 65, 2022
7QUK
DownloadVisualize
BU of 7quk by Molmil
ATAD2 in complex with FragLite1
分子名称: 1,2-ETHANEDIOL, 4-bromo-1H-pyrazole, ATPase family AAA domain-containing protein 2, ...
著者Turberville, S, Martin, M.P, Hope, I, Noble, M.E.M.
登録日2022-01-18
公開日2022-11-23
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.47 Å)
主引用文献Mapping Ligand Interactions of Bromodomains BRD4 and ATAD2 with FragLites and PepLites─Halogenated Probes of Druglike and Peptide-like Molecular Interactions.
J.Med.Chem., 65, 2022
5NDV
DownloadVisualize
BU of 5ndv by Molmil
Crystal structure of Paromomycin bound to the yeast 80S ribosome
分子名称: 18S ribosomal RNA, 25S ribosomal RNA, 40S ribosomal protein S0-A, ...
著者Prokhorova, I, Djumagulov, M, Urzhumtsev, A, Yusupov, M, Yusupova, G.
登録日2017-03-09
公開日2017-12-13
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (3.3 Å)
主引用文献Aminoglycoside interactions and impacts on the eukaryotic ribosome.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
1LEG
DownloadVisualize
BU of 1leg by Molmil
Crystal Structure of H-2Kb bound to the dEV8 peptide
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, BETA-2-MICROGLOBULIN, ...
著者Luz, J.G, Huang, M, Garcia, K.C, Rudolph, M.G, Apostolopoulos, V, Teyton, L, Wilson, I.A.
登録日2002-04-09
公開日2002-06-19
最終更新日2020-07-29
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Structural comparison of allogeneic and syngeneic T cell receptor-peptide-major histocompatibility complex complexes: a buried alloreactive mutation subtly alters peptide presentation substantially increasing V(beta) Interactions.
J.Exp.Med., 195, 2002
6XK0
DownloadVisualize
BU of 6xk0 by Molmil
Albumin-dexamethasone complex
分子名称: Albumin, CITRATE ANION, DEXAMETHASONE, ...
著者Czub, M.P, Majorek, K.A, Shabalin, I.G, Minor, W, New York Structural Genomics Research Consortium (NYSGRC)
登録日2020-06-24
公開日2020-07-15
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Molecular determinants of vascular transport of dexamethasone in COVID-19 therapy.
Iucrj, 7, 2020
7CDL
DownloadVisualize
BU of 7cdl by Molmil
holo-methanol dehydrogenase (MDH) with Cys131-Cys132 reduced from Methylococcus capsulatus (Bath)
分子名称: CALCIUM ION, Methanol dehydrogenase [cytochrome c] subunit 2, Methanol dehydrogenase protein, ...
著者Chuankhayan, P, Chan, S.I, Nareddy, P.K.R, Tsai, I.K, Tsai, Y.F, Chen, K.H.-C, Yu, S.S.-F, Chen, C.J.
登録日2020-06-20
公開日2021-06-23
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Mechanism of Pyrroloquinoline Quinone-Dependent Hydride Transfer Chemistry from Spectroscopic and High-Resolution X-ray Structural Studies of the Methanol Dehydrogenase from Methylococcus capsulatus (Bath).
J.Am.Chem.Soc., 143, 2021
3FOL
DownloadVisualize
BU of 3fol by Molmil
Crystal structure of the Class I MHC Molecule H-2Kwm7 with a Single Self Peptide VNDIFERI
分子名称: 8 residue synthetic peptide, Beta-2-microglobulin, MHC
著者Brims, D.R, Qian, J, Jarchum, I, Yamada, T, Mikesh, L, Palmieri, E, Lund, T, Hattori, M, Shabanowitz, J, Hunt, D.F, Ramagopal, U.A, Malashkevich, V.N, Almo, S.C, Nathenson, S.G, DiLorenzo, T.P.
登録日2008-12-30
公開日2010-01-12
最終更新日2017-11-01
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Predominant occupation of the class I MHC molecule H-2Kwm7 with a single self-peptide suggests a mechanism for its diabetes-protective effect
Int.Immunol., 22, 2010
7CFX
DownloadVisualize
BU of 7cfx by Molmil
NAD-soaked Holo-methanol dehydrogenase (MDH) from Methylococcus capsulatus (Bath)
分子名称: CALCIUM ION, Methanol dehydrogenase [cytochrome c] subunit 2, Methanol dehydrogenase protein, ...
著者Chuankhayan, P, Chan, S.I, Nareddy, P.K.R, Tsai, I.K, Tsai, Y.F, Chen, K.H.-C, Yu, S.S.-F, Chen, C.J.
登録日2020-06-29
公開日2021-06-30
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Mechanism of Pyrroloquinoline Quinone-Dependent Hydride Transfer Chemistry from Spectroscopic and High-Resolution X-ray Structural Studies of the Methanol Dehydrogenase from Methylococcus capsulatus (Bath).
J.Am.Chem.Soc., 143, 2021
7CED
DownloadVisualize
BU of 7ced by Molmil
Apo-methanol dehydrogenase (MDH) from Methylococcus capsulatus (Bath)
分子名称: Methanol dehydrogenase [cytochrome c] subunit 2, Methanol dehydrogenase protein, large subunit
著者Chuankhayan, P, Chan, S.I, Nareddy, P.K.R, Tsai, I.K, Tsai, Y.F, Chen, K.H.-C, Yu, S.S.-F, Chen, C.J.
登録日2020-06-22
公開日2021-06-30
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Mechanism of Pyrroloquinoline Quinone-Dependent Hydride Transfer Chemistry from Spectroscopic and High-Resolution X-ray Structural Studies of the Methanol Dehydrogenase from Methylococcus capsulatus (Bath).
J.Am.Chem.Soc., 143, 2021
7CE5
DownloadVisualize
BU of 7ce5 by Molmil
Methanol-PQQ bound methanol dehydrogenase (MDH) from Methylococcus capsulatus (Bath)
分子名称: CALCIUM ION, METHANOL, Methanol dehydrogenase [cytochrome c] subunit 2, ...
著者Chuankhayan, P, Chan, S.I, Nareddy, P.K.R, Tsai, I.K, Tsai, Y.F, Chen, K.H.-C, Yu, S.S.-F, Chen, C.J.
登録日2020-06-22
公開日2021-06-30
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Mechanism of Pyrroloquinoline Quinone-Dependent Hydride Transfer Chemistry from Spectroscopic and High-Resolution X-ray Structural Studies of the Methanol Dehydrogenase from Methylococcus capsulatus (Bath).
J.Am.Chem.Soc., 143, 2021
7CE9
DownloadVisualize
BU of 7ce9 by Molmil
PQQ-soaked Apo-methanol dehydrogenase (MDH) from Methylococcus capsulatus (Bath)
分子名称: CALCIUM ION, Methanol dehydrogenase [cytochrome c] subunit 2, Methanol dehydrogenase protein, ...
著者Chuankhayan, P, Chan, S.I, Nareddy, P.K.R, Tsai, I.K, Tsai, Y.F, Chen, K.H.-C, Yu, S.S.-F, Chen, C.J.
登録日2020-06-22
公開日2021-06-30
最終更新日2023-11-29
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Mechanism of Pyrroloquinoline Quinone-Dependent Hydride Transfer Chemistry from Spectroscopic and High-Resolution X-ray Structural Studies of the Methanol Dehydrogenase from Methylococcus capsulatus (Bath).
J.Am.Chem.Soc., 143, 2021
5NUN
DownloadVisualize
BU of 5nun by Molmil
Engineered beta-lactoglobulin: variant F105L-L39A-M107F in complex with chlorpromazine (LG-LAF-CLP)
分子名称: 3-(2-chloro-10H-phenothiazin-10-yl)-N,N-dimethylpropan-1-amine, Beta-lactoglobulin
著者Loch, J.I, Bonarek, P, Towrzydlo, M, Lazinskia, I, Szydlowska, J, Lewinski, K.
登録日2017-04-30
公開日2018-04-04
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (1.95 Å)
主引用文献The engineered beta-lactoglobulin with complementarity to the chlorpromazine chiral conformers.
Int. J. Biol. Macromol., 114, 2018
6HCR
DownloadVisualize
BU of 6hcr by Molmil
Synthetic Self-assembling ADDomer Platform for Highly Efficient Vaccination by Genetically-encoded Multi-epitope Display
分子名称: Penton protein
著者Bufton, J.C, Berger, I, Schaffitzel, C, Garzoni, F, Rabi, F.A.
登録日2018-08-16
公開日2019-08-28
最終更新日2024-05-15
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Synthetic self-assembling ADDomer platform for highly efficient vaccination by genetically encoded multiepitope display.
Sci Adv, 5, 2019
7OMT
DownloadVisualize
BU of 7omt by Molmil
Crystal structure of ProMacrobody 21 with bound maltose
分子名称: HEXAETHYLENE GLYCOL, MAGNESIUM ION, ProMacrobody 21, ...
著者Botte, M, Ni, D, Schenck, S, Zimmermann, I, Chami, M, Bocquet, N, Egloff, P, Bucher, D, Trabuco, M, Cheng, R.K.Y, Brunner, J.D, Seeger, M.A, Stahlberg, H, Hennig, M.
登録日2021-05-24
公開日2022-05-04
最終更新日2024-01-31
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Cryo-EM structures of a LptDE transporter in complex with Pro-macrobodies offer insight into lipopolysaccharide translocation.
Nat Commun, 13, 2022
6XC7
DownloadVisualize
BU of 6xc7 by Molmil
Crystal structure of SARS-CoV-2 receptor binding domain in complex with antibodies CC12.3 and CR3022
分子名称: CC12.3 heavy chain, CC12.3 light chain, CR3022 heavy chain, ...
著者Yuan, M, Liu, H, Wu, N.C, Zhu, X, Wilson, I.A.
登録日2020-06-08
公開日2020-07-08
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.883 Å)
主引用文献Structural basis of a shared antibody response to SARS-CoV-2.
Science, 369, 2020
6XMP
DownloadVisualize
BU of 6xmp by Molmil
Structure of P5A-ATPase Spf1, Apo form
分子名称: DODECYL-BETA-D-MALTOSIDE, P5A-type ATPase
著者Park, E, Sim, S.I.
登録日2020-06-30
公開日2020-09-23
最終更新日2024-03-06
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献The endoplasmic reticulum P5A-ATPase is a transmembrane helix dislocase.
Science, 369, 2020

223532

件を2024-08-07に公開中

PDB statisticsPDBj update infoContact PDBjnumon