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PDB: 17822 results

7LX6
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T4 lysozyme mutant L99A
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 5-[(2-phenylethyl)sulfanyl]-1H-1,2,3-triazole, Lysozyme
Authors:Kamenik, A.S, Singh, I, Lak, P, Balius, T.E, Liedl, K.R, Shoichet, B.K.
Deposit date:2021-03-03
Release date:2021-09-29
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.05 Å)
Cite:Energy penalties enhance flexible receptor docking in a model cavity.
Proc.Natl.Acad.Sci.USA, 118, 2021
1KPB
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PKCI-1-APO
Descriptor: HUMAN PROTEIN KINASE C INTERACTING PROTEIN 1 (ZINC PROTEIN)
Authors:Lima, C.D, Klein, M.G, Weinstein, I.B, Hendrickson, W.A.
Deposit date:1996-01-06
Release date:1996-07-11
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2 Å)
Cite:Three-dimensional structure of human protein kinase C interacting protein 1, a member of the HIT family of proteins.
Proc.Natl.Acad.Sci.USA, 93, 1996
1KPC
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BU of 1kpc by Molmil
PKCI-1-APO+ZINC
Descriptor: HUMAN PROTEIN KINASE C INTERACTING PROTEIN 1 (ZINC PROTEIN)
Authors:Lima, C.D, Klein, M.G, Weinstein, I.B, Hendrickson, W.A.
Deposit date:1996-01-06
Release date:1996-07-11
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Three-dimensional structure of human protein kinase C interacting protein 1, a member of the HIT family of proteins.
Proc.Natl.Acad.Sci.USA, 93, 1996
1KIV
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BU of 1kiv by Molmil
RECOMBINANT KRINGLE IV-10/M66 VARIANT OF HUMAN APOLIPOPROTEIN(A)
Descriptor: APOLIPOPROTEIN A
Authors:Mochalkin, I, Tulinsky, A, Scanu, A.
Deposit date:1998-08-26
Release date:1999-05-18
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Recombinant kringle IV-10 modules of human apolipoprotein(a): structure, ligand binding modes, and biological relevance.
Biochemistry, 38, 1999
1YNZ
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BU of 1ynz by Molmil
SH3 domain of yeast Pin3
Descriptor: Pin3p
Authors:Kursula, P, Kursula, I, Zou, P, Lehmann, F, Song, Y.H, Wilmanns, M.
Deposit date:2005-01-26
Release date:2006-05-30
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural analysis of the yeast SH3 domain proteome
To be Published
1L2H
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BU of 1l2h by Molmil
Crystal structure of Interleukin 1-beta F42W/W120F mutant
Descriptor: Interleukin 1-beta
Authors:Rudolph, M.G, Kelker, M.S, Schneider, T.R, Yeates, T.O, Oseroff, V, Heidary, D.K, Jennings, P.A, Wilson, I.A.
Deposit date:2002-02-21
Release date:2003-02-04
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.54 Å)
Cite:Use of multiple anomalous dispersion to phase highly merohedrally twinned crystals of interleukin-1beta.
Acta Crystallogr.,Sect.D, 59, 2003
1L4E
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BU of 1l4e by Molmil
The crystal structure of CobT complexed with alpha-ribazole-5'-phosphate
Descriptor: ALPHA-RIBAZOLE-5'-PHOSPHATE, Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase
Authors:Cheong, C.-G, Escalante-Semerena, J, Rayment, I.
Deposit date:2002-03-06
Release date:2002-09-07
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2 Å)
Cite:Capture of a labile substrate by expulsion of water molecules from the active site of nicotinate mononucleotide:5,6-dimethylbenzimidazole phosphoribosyltransferase (CobT) from Salmonella enterica.
J.Biol.Chem., 277, 2002
3HO3
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Crystal structure of Hedgehog-interacting protein (HHIP)
Descriptor: Hedgehog-interacting protein
Authors:Bosanac, I, Hymowitz, S.G.
Deposit date:2009-06-01
Release date:2009-06-23
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:The structure of SHH in complex with HHIP reveals a recognition role for the Shh pseudo active site in signaling.
Nat.Struct.Mol.Biol., 16, 2009
7LP5
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Structure of Nedd4L WW3 domain
Descriptor: Angiomotin,E3 ubiquitin-protein ligase NEDD4-like
Authors:Alam, S.L, Alian, A, Thompson, T, Rheinemann, L, Volkman, B.F, Peterson, F.C, Sundquist, W.I.
Deposit date:2021-02-11
Release date:2021-07-28
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Interactions between AMOT PPxY motifs and NEDD4L WW domains function in HIV-1 release.
J.Biol.Chem., 297, 2021
1LKE
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ENGINEERED LIPOCALIN DIGA16 IN COMPLEX WITH DIGOXIGENIN
Descriptor: DIGOXIGENIN, DigA16
Authors:Korndoerfer, I.P, Skerra, A.
Deposit date:2002-04-25
Release date:2003-06-17
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural mechanism of specific ligand recognition by a lipocalin tailored for the complexation of digoxigenin.
J.Mol.Biol., 330, 2003
7LP1
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Structure of Nedd4L WW3 domain
Descriptor: E3 ubiquitin-protein ligase NEDD4-like, GLYCEROL, NITRATE ION
Authors:Alian, A, Alam, S.L, Thompson, T, Rheinemann, L, Sundquist, W.I.
Deposit date:2021-02-11
Release date:2021-07-28
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Interactions between AMOT PPxY motifs and NEDD4L WW domains function in HIV-1 release.
J.Biol.Chem., 297, 2021
1LM0
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BU of 1lm0 by Molmil
Solution structure and characterization of the heme chaperone CcmE
Descriptor: cytochrome c maturation protein E
Authors:Arnesano, F, Banci, L, Barker, P.D, Bertini, I, Rosato, A, Su, X.C, Viezzoli, M.S.
Deposit date:2002-04-30
Release date:2002-12-25
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Solution structure and characterization of the heme chaperone CcmE
Biochemistry, 41, 2002
4HEJ
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BU of 4hej by Molmil
Discovery of Selective and Potent Inhibitors of Gram-positive Bacterial Thymidylate Kinase (TMK): Compund 16
Descriptor: 5-methyl-1-[(3S)-1-{3-[3-(trifluoromethyl)phenoxy]benzyl}piperidin-3-yl]pyrimidine-2,4(1H,3H)-dione, Thymidylate kinase
Authors:Martinez-Botella, G, Breen, J, Duffy, J, Dumas, J, Geng, B, Gowers, I, Green, O, Guler, S, Hentemann, M, Hernandez-Juan, F, Joseph-McCarthy, D, Kawatkar, S, Larsen, N, Lazari, O, Loch, J, Macritchie, J.
Deposit date:2012-10-03
Release date:2012-10-24
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2 Å)
Cite:Discovery of Selective and Potent Inhibitors of Gram-Positive Bacterial Thymidylate Kinase (TMK).
J.Med.Chem., 55, 2012
3HPB
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BU of 3hpb by Molmil
Crystal structure of SNX5-PX domain in P212121 space group
Descriptor: CHLORIDE ION, Snx5 protein
Authors:Koharudin, L.M.I, Furey, W, Gronenborn, A.M.
Deposit date:2009-06-03
Release date:2009-06-23
Last modified:2017-11-01
Method:X-RAY DIFFRACTION (2.19 Å)
Cite:The Phox domain of sorting nexin 5 lacks ptdins(3)p specificity and preferentially binds to ptdins(4,5)P2
To be Published
1NW6
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Structure of the beta class N6-adenine DNA methyltransferase RsrI bound to sinefungin
Descriptor: CHLORIDE ION, MODIFICATION METHYLASE RSRI, SINEFUNGIN
Authors:Thomas, C.B, Scavetta, R.D, Gumport, R.I, Churchill, M.E.A.
Deposit date:2003-02-05
Release date:2003-07-29
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.94 Å)
Cite:Structures of liganded and unliganded RsrI N6-adenine DNA methyltransferase: a distinct orientation for active cofactor binding
J.Biol.Chem., 278, 2003
1LGP
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BU of 1lgp by Molmil
Crystal structure of the FHA domain of the Chfr mitotic checkpoint protein complexed with tungstate
Descriptor: TUNGSTATE(VI)ION, cell cycle checkpoint protein CHFR
Authors:Stavridi, E.S, Huyen, Y, Loreto, I.R, Scolnick, D.M, Halazonetis, T.D, Pavletich, N.P, Jeffrey, P.D.
Deposit date:2002-04-16
Release date:2002-05-08
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of the FHA domain of the Chfr mitotic checkpoint protein and its complex with tungstate.
Structure, 10, 2002
3I4Y
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Crystal structure determination of Catechol 1,2-Dioxygenase from Rhodococcus opacus 1CP in complex with 3,5-dichlorocatechol
Descriptor: (4S,7R)-4-HYDROXY-N,N,N-TRIMETHYL-9-OXO-7-[(PALMITOYLOXY)METHYL]-3,5,8-TRIOXA-4-PHOSPHAHEXACOSAN-1-AMINIUM 4-OXIDE, 3,5-dichlorobenzene-1,2-diol, Catechol 1,2-dioxygenase, ...
Authors:Matera, I, Ferraroni, M, Kolomytseva, M, Briganti, F, Scozzafava, A.
Deposit date:2009-07-03
Release date:2010-01-12
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Catechol 1,2-dioxygenase from the Gram-positive Rhodococcus opacus 1CP: Quantitative structure/activity relationship and the crystal structures of native enzyme and catechols adducts.
J.Struct.Biol., 170, 2010
1YUS
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BU of 1yus by Molmil
Solution structure of apo-S100A13
Descriptor: S100 calcium binding protein A13
Authors:Arnesano, F, Banci, L, Bertini, I, Fantoni, A, Tenori, L, Viezzoli, M.S, Structural Proteomics in Europe (SPINE)
Deposit date:2005-02-14
Release date:2005-10-18
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Structural Interplay between Calcium(II) and Copper(II) Binding to S100A13 Protein
Angew.Chem.Int.Ed.Engl., 44, 2005
7LWD
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BU of 7lwd by Molmil
Cryo-EM structure of the wild-type human serotonin transporter complexed with vilazodone, imipramine and 15B8 Fab
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 3-(5H-DIBENZO[B,F]AZEPIN-5-YL)-N,N-DIMETHYLPROPAN-1-AMINE, 5-{4-[4-(5-cyano-1H-indol-3-yl)butyl]piperazin-1-yl}-1-benzofuran-2-carboxamide, ...
Authors:Yang, D, Kalenderoglou, I.E, Gouaux, E, Coleman, J.A, Loland, C.J.
Deposit date:2021-03-01
Release date:2021-08-11
Last modified:2021-09-01
Method:ELECTRON MICROSCOPY (3.65 Å)
Cite:The antidepressant drug vilazodone is an allosteric inhibitor of the serotonin transporter.
Nat Commun, 12, 2021
4HDN
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Crystal Structure of ArsAB in the Substrate-Free State.
Descriptor: ArsA, ArsB
Authors:Newmister, S.A, Chan, C.H, Escalante-Semerena, J.C, Rayment, I.
Deposit date:2012-10-02
Release date:2012-10-24
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.24 Å)
Cite:Structural Insights into the Function of the Nicotinate Mononucleotide:phenol/p-cresol Phosphoribosyltransferase (ArsAB) Enzyme from Sporomusa ovata.
Biochemistry, 51, 2012
1L5B
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BU of 1l5b by Molmil
DOMAIN-SWAPPED CYANOVIRIN-N DIMER
Descriptor: 2-[N-CYCLOHEXYLAMINO]ETHANE SULFONIC ACID, SODIUM ION, cyanovirin-N
Authors:Barrientos, L.G, Louis, J.M, Botos, I, Mori, T, Han, Z, O'Keefe, B.R, Boyd, M.R, Wlodawer, A, Gronenborn, A.M.
Deposit date:2002-03-06
Release date:2002-05-22
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2 Å)
Cite:The domain-swapped dimer of cyanovirin-N is in a metastable folded state: reconciliation of X-ray and NMR structures.
Structure, 10, 2002
1ZPL
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BU of 1zpl by Molmil
E. coli F17a-G lectin domain complex with GlcNAc(beta1-O)Me
Descriptor: F17a-G, methyl 2-acetamido-2-deoxy-beta-D-glucopyranoside
Authors:Buts, L, Wellens, A, Van Molle, I, Wyns, L, Loris, R, Lahmann, M, Oscarson, S, De Greve, H, Bouckaert, J.
Deposit date:2005-05-17
Release date:2006-05-23
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Impact of natural variation in bacterial F17G adhesins on crystallization behaviour.
Acta Crystallogr.,Sect.D, 61, 2005
1L5O
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Crystal Structure of CobT complexed with 3,4-dimethylphenol and nicotinate mononucleotide
Descriptor: 3,4-DIMETHYLPHENOL, NICOTINATE MONONUCLEOTIDE, Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase
Authors:Cheong, C.-G, Escalante-Semerena, J, Rayment, I.
Deposit date:2002-03-07
Release date:2002-09-07
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Capture of a labile substrate by expulsion of water molecules from the active site of nicotinate mononucleotide:5,6-dimethylbenzimidazole phosphoribosyltransferase (CobT) from Salmonella enterica.
J.Biol.Chem., 277, 2002
3I3G
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Crystal Structure of Trypanosoma brucei N-acetyltransferase (Tb11.01.2886) at 1.86A
Descriptor: N-acetyltransferase
Authors:Qiu, W, Wernimont, A.K, Marino, K, Zhang, A.Z, Ma, D, Lin, Y.H, Mackenzie, F, Kozieradzki, I, Cossar, D, Zhao, Y, Schapira, M, Bochkarev, A, Arrowsmith, C.H, Bountra, C, Weigelt, J, Edwards, A.M, J Ferguson, M.A, Hui, R, Structural Genomics Consortium (SGC)
Deposit date:2009-06-30
Release date:2009-08-11
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.86 Å)
Cite:Crystal Structure Trypanosoma brucei N-acetyltransferase (Tb11.01.2886) at 1.86A
To be Published
1L4F
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The crystal structure of CobT complexed with 4,5-dimethyl-1,2-phenylenediamine and nicotinate mononucleotide
Descriptor: 4,5-DIMETHYL-1,2-PHENYLENEDIAMINE, NICOTINATE MONONUCLEOTIDE, Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase
Authors:Cheong, C.-G, Escalante-Semerena, J, Rayment, I.
Deposit date:2002-03-06
Release date:2002-09-07
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Capture of a labile substrate by expulsion of water molecules from the active site of nicotinate mononucleotide:5,6-dimethylbenzimidazole phosphoribosyltransferase (CobT) from Salmonella enterica.
J.Biol.Chem., 277, 2002

223790

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