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PDB: 43 results

8DL3
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BU of 8dl3 by Molmil
Crystal structure of the human queuine salvage enzyme DUF2419, complexed with queuine
Descriptor: 2-amino-5-({[(1S,4S,5R)-4,5-dihydroxycyclopent-2-en-1-yl]amino}methyl)-3,7-dihydro-4H-pyrrolo[2,3-d]pyrimidin-4-one, Queuosine salvage protein
Authors:Hung, S.-H, Swairjo, M.A.
Deposit date:2022-07-06
Release date:2022-12-21
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.26 Å)
Cite:Structural basis of Qng1-mediated salvage of the micronutrient queuine from queuosine-5'-monophosphate as the biological substrate.
Nucleic Acids Res., 51, 2023
7UI4
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Crystal structure of the DNA preQ0 insertase DpdA
Descriptor: DNA-guanine transglycosylase, ZINC ION
Authors:Hung, S.-H, Swairjo, M.A.
Deposit date:2022-03-28
Release date:2023-02-22
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.51 Å)
Cite:7-Deazaguanines in DNA: functional and structural elucidation of a DNA modification system.
Nucleic Acids Res., 51, 2023
3UD8
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BU of 3ud8 by Molmil
Crystal Structure Analysis of FGF1-Disaccharide(NI22) complex
Descriptor: 2-deoxy-3-O-sulfo-2-(sulfoamino)-alpha-D-glucopyranose-(1-4)-1-O-methyl-2-O-sulfo-alpha-L-idopyranuronic acid, Heparin-binding growth factor 1, PHOSPHATE ION
Authors:Hung, S.-C, Shi, Z.
Deposit date:2011-10-27
Release date:2012-11-28
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.37 Å)
Cite:Divergent synthesis of 48 heparan sulfate-based disaccharides and probing the specific sugar-fibroblast growth factor-1 interaction
J.Am.Chem.Soc., 134, 2012
3UD9
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Crystal Structure Analysis of FGF1-Disaccharide(NI23) complex
Descriptor: 2-deoxy-6-O-sulfo-2-(sulfoamino)-alpha-D-glucopyranose-(1-4)-1-O-methyl-2-O-sulfo-alpha-L-idopyranuronic acid, Heparin-binding growth factor 1, PHOSPHATE ION
Authors:Hung, S.-C, Shi, Z.
Deposit date:2011-10-27
Release date:2012-11-28
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.34 Å)
Cite:Divergent synthesis of 48 heparan sulfate-based disaccharides and probing the specific sugar-fibroblast growth factor-1 interaction
J.Am.Chem.Soc., 134, 2012
3UDA
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BU of 3uda by Molmil
Crystal Structure Analysis of FGF1-Disaccharide(NI24) complex
Descriptor: 2-deoxy-3,6-di-O-sulfo-2-(sulfoamino)-alpha-D-glucopyranose-(1-4)-1-O-methyl-2-O-sulfo-alpha-L-idopyranuronic acid, Heparin-binding growth factor 1, PHOSPHATE ION
Authors:Hung, S.-C, Shi, Z.
Deposit date:2011-10-27
Release date:2012-11-28
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.51 Å)
Cite:Divergent synthesis of 48 heparan sulfate-based disaccharides and probing the specific sugar-fibroblast growth factor-1 interaction
J.Am.Chem.Soc., 134, 2012
7UK3
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BU of 7uk3 by Molmil
Crystal structure of queuine salvage enzyme DUF2419, wild-type (non-His6x tagged)
Descriptor: Queuosine salvage protein DUF2419
Authors:Hung, S.-H, Swairjo, M.A.
Deposit date:2022-03-31
Release date:2022-12-21
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.31 Å)
Cite:Structural basis of Qng1-mediated salvage of the micronutrient queuine from queuosine-5'-monophosphate as the biological substrate.
Nucleic Acids Res., 51, 2023
7UGK
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BU of 7ugk by Molmil
Crystal structure of the human queuine salvage enzyme DUF2419, wild-type apo form
Descriptor: 2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Queuosine salvage protein DUF2419
Authors:Hung, S.-H, Swairjo, M.A.
Deposit date:2022-03-24
Release date:2022-12-21
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.78 Å)
Cite:Structural basis of Qng1-mediated salvage of the micronutrient queuine from queuosine-5'-monophosphate as the biological substrate.
Nucleic Acids Res., 51, 2023
3UD7
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BU of 3ud7 by Molmil
Crystal Structure Analysis of FGF1-Disaccharide(NI21) complexes
Descriptor: 2-deoxy-2-(sulfoamino)-alpha-D-glucopyranose-(1-4)-1-O-methyl-2-O-sulfo-alpha-L-idopyranuronic acid, Heparin-binding growth factor 1, PHOSPHATE ION
Authors:Hung, S.-C, Shi, Z.
Deposit date:2011-10-27
Release date:2012-11-28
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Divergent synthesis of 48 heparan sulfate-based disaccharides and probing the specific sugar-fibroblast growth factor-1 interaction
J.Am.Chem.Soc., 134, 2012
7U07
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BU of 7u07 by Molmil
Crystal structure of queuine salvage enzyme DUF2419, apo form
Descriptor: Queuine salvage enzyme DUF2419
Authors:Hung, S.-H, Swairjo, M.A.
Deposit date:2022-02-17
Release date:2022-12-21
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural basis of Qng1-mediated salvage of the micronutrient queuine from queuosine-5'-monophosphate as the biological substrate.
Nucleic Acids Res., 51, 2023
7U1O
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BU of 7u1o by Molmil
Crystal structure of queuine salvage enzyme DUF2419 complexed with queuosine
Descriptor: 2-amino-5-({[(1S,4S,5R)-4,5-dihydroxycyclopent-2-en-1-yl]amino}methyl)-7-beta-D-ribofuranosyl-3,7-dihydro-4H-pyrrolo[2,3-d]pyrimidin-4-one, DI(HYDROXYETHYL)ETHER, MALONATE ION, ...
Authors:Hung, S.-H, Swairjo, M.A.
Deposit date:2022-02-21
Release date:2022-12-21
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Structural basis of Qng1-mediated salvage of the micronutrient queuine from queuosine-5'-monophosphate as the biological substrate.
Nucleic Acids Res., 51, 2023
7U5A
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BU of 7u5a by Molmil
Crystal structure of queuine salvage enzyme DUF2419 mutant K199C, complexed with queuosine
Descriptor: 2-amino-5-({[(1S,4S,5R)-4,5-dihydroxycyclopent-2-en-1-yl]amino}methyl)-7-beta-D-ribofuranosyl-3,7-dihydro-4H-pyrrolo[2,3-d]pyrimidin-4-one, MALONATE ION, Queuine salvage enzyme DUF2419
Authors:Hung, S.-H, Swairjo, M.A.
Deposit date:2022-03-01
Release date:2022-12-21
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural basis of Qng1-mediated salvage of the micronutrient queuine from queuosine-5'-monophosphate as the biological substrate.
Nucleic Acids Res., 51, 2023
7U91
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BU of 7u91 by Molmil
Crystal structure of queuine salvage enzyme DUF2419, in complex with queuosine-5'-monophosphate
Descriptor: 2-amino-5-({[(1S,4S,5R)-4,5-dihydroxycyclopent-2-en-1-yl]amino}methyl)-7-(5-O-phosphono-beta-D-ribofuranosyl)-3,7-dihydro-4H-pyrrolo[2,3-d]pyrimidin-4-one, AMMONIUM ION, DI(HYDROXYETHYL)ETHER, ...
Authors:Hung, S.-H, Swairjo, M.A.
Deposit date:2022-03-09
Release date:2022-12-21
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structural basis of Qng1-mediated salvage of the micronutrient queuine from queuosine-5'-monophosphate as the biological substrate.
Nucleic Acids Res., 51, 2023
7ULC
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BU of 7ulc by Molmil
Crystal structure of queuine salvage enzyme DUF2419 mutant D231N, in complex with queuosine-5'-monophosphate
Descriptor: 2-amino-5-({[(1S,4S,5R)-4,5-dihydroxycyclopent-2-en-1-yl]amino}methyl)-7-(5-O-phosphono-beta-D-ribofuranosyl)-3,7-dihydro-4H-pyrrolo[2,3-d]pyrimidin-4-one, DI(HYDROXYETHYL)ETHER, Queuosine salvage protein DUF2419
Authors:Hung, S.-H, Swairjo, M.A.
Deposit date:2022-04-04
Release date:2022-12-21
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.99 Å)
Cite:Structural basis of Qng1-mediated salvage of the micronutrient queuine from queuosine-5'-monophosphate as the biological substrate.
Nucleic Acids Res., 51, 2023
4DCP
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BU of 4dcp by Molmil
Crystal Structure of caspase 3, L168F mutant
Descriptor: Caspase Inhibitor AC-DEVD-CHO, Caspase-3 subunit p12, Caspase-3 subunit p17
Authors:Chung, S.J, Kang, H.J, Kim, S.J.
Deposit date:2012-01-18
Release date:2012-12-12
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Molecular insight into the role of the leucine residue on the L2 loop in the catalytic activity of caspases 3 and 7
Biosci.Rep., 32, 2012
1MQ0
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BU of 1mq0 by Molmil
Crystal Structure of Human Cytidine Deaminase
Descriptor: 1-BETA-RIBOFURANOSYL-1,3-DIAZEPINONE, Cytidine Deaminase, ZINC ION
Authors:Chung, S.J, Fromme, J.C, Verdine, G.L.
Deposit date:2002-09-13
Release date:2003-11-04
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structure of human cytidine deaminase bound to a potent inhibitor
J.Med.Chem., 48, 2005
1M3H
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BU of 1m3h by Molmil
Crystal Structure of Hogg1 D268E Mutant with Product Oligonucleotide
Descriptor: 5'-D(P*GP*CP*GP*TP*CP*CP*AP*(DDX))-3', 5'-D(P*GP*GP*TP*AP*GP*AP*CP*CP*TP*GP*GP*AP*CP*GP*C)-3', 5'-D(P*GP*TP*CP*TP*AP*CP*C)-3', ...
Authors:Chung, S.J, Verdine, G.L.
Deposit date:2002-06-27
Release date:2004-04-20
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Structures of End Products Resulting from Lesion Processing by a DNA Glycosylase/Lyase
Chem.Biol., 11, 2004
1M3Q
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BU of 1m3q by Molmil
Crystal Structure of hogg1 D268E Mutant with Base-Excised DNA and 8-aminoguanine
Descriptor: 5'-D(*GP*CP*GP*TP*CP*CP*AP*(DRZ)P*GP*TP*CP*TP*AP*CP*C)-3', 5'-D(*GP*GP*TP*AP*GP*AP*CP*CP*TP*GP*GP*AP*CP*GP*C)-3', 8-AMINOGUANINE, ...
Authors:Chung, S.J, Verdine, G.L.
Deposit date:2002-06-28
Release date:2004-02-17
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structures of End Products Resulting from Lesion Processing by a DNA Glycosylase/Lyase
Chem.Biol., 11, 2004
4DCO
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BU of 4dco by Molmil
Crystal Structure of caspase 3, L168Y mutant
Descriptor: Caspase Inhibitor AC-DEVD-CHO, Caspase-3 subunit p12, Caspase-3 subunit p17
Authors:Chung, S.J, Kang, H.J, Kim, S.J.
Deposit date:2012-01-18
Release date:2012-12-12
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Molecular insight into the role of the leucine residue on the L2 loop in the catalytic activity of caspases 3 and 7
Biosci.Rep., 32, 2012
4DCJ
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BU of 4dcj by Molmil
Crystal structure of caspase 3, L168D mutant
Descriptor: Caspase Inhibitor AC-DEVD-CHO, Caspase-3 subunit p12, Caspase-3 subunit p17
Authors:Chung, S.J, Kang, H.J, Kim, S.J.
Deposit date:2012-01-17
Release date:2012-12-12
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Molecular insight into the role of the leucine residue on the L2 loop in the catalytic activity of caspases 3 and 7
Biosci.Rep., 32, 2012
7WRS
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BU of 7wrs by Molmil
Crystal structure of the chicken isoleucyl-tRNA synthetase 1 (IARS1) UNE-I complexed with glutamyl-tRNA synthetase 1 (EARS1)
Descriptor: Glutamyl-tRNA synthetase, Isoleucyl-tRNA synthetase
Authors:Chung, S, Cho, Y.
Deposit date:2022-01-27
Release date:2022-11-23
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Regulation of BRCA1 stability through the tandem UBX domains of isoleucyl-tRNA synthetase 1.
Nat Commun, 13, 2022
7WRU
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BU of 7wru by Molmil
Crystal structure of the apo chicken glutamyl-tRNA synthetase 1 (EARS1)
Descriptor: Glutamyl-tRNA synthetase, MERCURY (II) ION
Authors:Chung, S, Cho, Y.
Deposit date:2022-01-27
Release date:2022-11-23
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Regulation of BRCA1 stability through the tandem UBX domains of isoleucyl-tRNA synthetase 1.
Nat Commun, 13, 2022
5KUC
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BU of 5kuc by Molmil
Crystal structure of trypsin activated Cry6Aa
Descriptor: Pesticidal crystal protein Cry6Aa
Authors:Kelker, M.S, Xu, X, Lee, M, Chan, M, Hung, S, Dementiev, K, Hey, T, Chikwana, V.M, Narva, K.E.
Deposit date:2016-07-13
Release date:2016-08-03
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2 Å)
Cite:The pesticidal Cry6Aa toxin from Bacillus thuringiensis is structurally similar to HlyE-family alpha pore-forming toxins.
Bmc Biol., 14, 2016
5KUD
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BU of 5kud by Molmil
Crystal structure of full length Cry6Aa
Descriptor: Pesticidal crystal protein Cry6Aa
Authors:Kelker, M.S, Xu, X, Lee, M, Chan, M, Hung, S, Dementiev, K, Chikwana, V.M, Hey, T, Narva, K.
Deposit date:2016-07-13
Release date:2016-08-03
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:The pesticidal Cry6Aa toxin from Bacillus thuringiensis is structurally similar to HlyE-family alpha pore-forming toxins.
Bmc Biol., 14, 2016
5D65
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BU of 5d65 by Molmil
X-RAY STRUCTURE OF MACROPHAGE INFLAMMATORY PROTEIN-1 ALPHA (CCL3) WITH HEPARIN COMPLEX
Descriptor: 2-deoxy-6-O-sulfo-2-(sulfoamino)-alpha-D-glucopyranose-(1-4)-2-O-sulfo-alpha-L-idopyranuronic acid, C-C motif chemokine 3, CHLORIDE ION, ...
Authors:Liang, W.G, Hwang, D.Y, Zulueta, M.M, Hung, S.C, Tang, W.
Deposit date:2015-08-11
Release date:2016-04-20
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Structural basis for oligomerization and glycosaminoglycan binding of CCL5 and CCL3.
Proc.Natl.Acad.Sci.USA, 113, 2016
6LDK
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BU of 6ldk by Molmil
Isoleucyl-tRNA synthetase from Candida albicans complexed with a isoleucyl-adenylate
Descriptor: ADENOSINE MONOPHOSPHATE, ISOLEUCINE, Isoleucine--tRNA ligase
Authors:Cho, Y, Chung, S.
Deposit date:2019-11-21
Release date:2020-11-04
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Structural Basis for the Antibiotic Resistance of Eukaryotic Isoleucyl-tRNA Synthetase.
Mol.Cells, 43, 2020

 

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