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PDB: 122 results

7E3U
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BU of 7e3u by Molmil
Crystal structure of the Pseudomonas aeruginosa dihydropyrimidinase complexed with 5-AU
Descriptor: 5-AMINO-1H-PYRIMIDINE-2,4-DIONE, D-hydantoinase/dihydropyrimidinase, ZINC ION
Authors:Yang, Y.C, Luo, R.H, Huang, Y.H, Huang, C.Y, Lin, E.S.
Deposit date:2021-02-09
Release date:2022-02-16
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.159 Å)
Cite:Molecular Insights into How the Dimetal Center in Dihydropyrimidinase Can Bind the Thymine Antagonist 5-Aminouracil: A Different Binding Mode from the Anticancer Drug 5-Fluorouracil.
Bioinorg Chem Appl, 2022, 2022
5YNZ
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BU of 5ynz by Molmil
Crystal structure of the dihydroorotase domain (K1556A) of human CAD
Descriptor: CAD protein, ZINC ION
Authors:Huang, Y.H, Chen, K.L, Cheng, J.H, Huang, C.Y.
Deposit date:2017-10-26
Release date:2018-10-24
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.774 Å)
Cite:Crystal structures of monometallic dihydropyrimidinase and the human dihydroorotase domain K1556A mutant reveal no lysine carbamylation within the active site
Biochem. Biophys. Res. Commun., 505, 2018
5YUO
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BU of 5yuo by Molmil
Crystal structure of SSB protein from Pseudomonas aeruginosa PAO1
Descriptor: GLYCEROL, Single-stranded DNA-binding protein
Authors:Huang, Y.H, Huang, C.Y.
Deposit date:2017-11-22
Release date:2018-10-31
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.037 Å)
Cite:The glycine-rich flexible region in SSB is crucial for PriA stimulation.
RSC Adv., 8, 2018
6AEQ
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BU of 6aeq by Molmil
Crystal structure of the ssDNA-binding domain of DnaT from Salmonella enterica Serovar Typhimurium LT2
Descriptor: Primosomal protein 1
Authors:Huang, Y.H, Huang, C.Y.
Deposit date:2018-08-06
Release date:2019-03-20
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.2518084 Å)
Cite:Crystal structure of the C-terminal domain of the primosomal DnaT protein: Insights into a new oligomerization mechanism.
Biochem. Biophys. Res. Commun., 511, 2019
6AEP
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BU of 6aep by Molmil
Crystal structure of the ssDNA-binding domain of DnaT from Salmonella enterica Serovar Typhimurium LT2 at 1.84 angstrom resolution
Descriptor: Primosomal protein 1
Authors:Huang, Y.H, Huang, C.Y.
Deposit date:2018-08-06
Release date:2019-08-07
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.844 Å)
Cite:Crystal structure of the ssDNA-binding domain of DnaT from Salmonella enterica Serovar Typhimurium LT2 at 1.84 angstrom resolution
To Be Published
7BET
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BU of 7bet by Molmil
Structure of Ribonucleotide reductase R2 from Escherichia coli collected by femtosecond serial crystallography on a COC membrane
Descriptor: FE (III) ION, Ribonucleoside-diphosphate reductase 1 subunit beta
Authors:Aurelius, O, John, J, Martiel, I, Marsh, M, Vera, L, Huang, C.Y, Olieric, V, Leonarski, P, Nass, K, Padeste, C, Karpik, A, Hogbom, M, Wang, M, Pedrini, B.
Deposit date:2020-12-24
Release date:2022-01-12
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Commissioning results from the SwissMX instrument for fixed target macromolecular crystallography at SwissFEL
To Be Published
7AT6
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BU of 7at6 by Molmil
Structure of thaumatin collected by femtosecond serial crystallography on a COC membrane
Descriptor: L(+)-TARTARIC ACID, R-1,2-PROPANEDIOL, SODIUM ION, ...
Authors:Martiel, I, Marsh, M, Vera, L, Huang, C.Y, Olieric, V, Leonarski, P, Nass, K, Padeste, C, Karpik, A, Wang, M, Pedrini, B.
Deposit date:2020-10-29
Release date:2021-11-24
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.46 Å)
Cite:Commissioning results from the SwissMX instrument for fixed target macromolecular crystallography at SwissFEL
To Be Published
6JDG
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BU of 6jdg by Molmil
Complexed crystal structure of PaSSB with ssDNA dT20 at 2.39 angstrom resolution
Descriptor: DNA (5'-D(P*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*TP*T)-3'), Single-stranded DNA-binding protein
Authors:Huang, Y.H, Huang, C.Y.
Deposit date:2019-02-01
Release date:2019-12-11
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.388 Å)
Cite:Complexed crystal structure of SSB reveals a novel single-stranded DNA binding mode (SSB)3:1: Phe60 is not crucial for defining binding paths.
Biochem.Biophys.Res.Commun., 520, 2019
6IRQ
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BU of 6irq by Molmil
Complexed crystal structure of PaSSB with ssDNA dT25 at 1.91 angstrom resolution
Descriptor: DNA (25-MER), Single-stranded DNA-binding protein
Authors:Huang, Y.H, Huang, C.Y.
Deposit date:2018-11-14
Release date:2019-12-11
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.91 Å)
Cite:Characterization of an SSB-dT25 complex: structural insights into the S-shaped ssDNA binding conformation.
Rsc Adv, 9, 2019
5YUN
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BU of 5yun by Molmil
Crystal structure of SSB complexed with myc
Descriptor: 3,5,7-TRIHYDROXY-2-(3,4,5-TRIHYDROXYPHENYL)-4H-CHROMEN-4-ONE, Single-stranded DNA-binding protein
Authors:Huang, Y.H, Huang, C.Y.
Deposit date:2017-11-22
Release date:2018-10-10
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.67 Å)
Cite:Crystal structure of SSB complexed with inhibitor myricetin.
Biochem. Biophys. Res. Commun., 504, 2018
6KLK
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BU of 6klk by Molmil
Crystal structure of the Pseudomonas aeruginosa dihydropyrimidinase complexed with 5-FU
Descriptor: 5-FLUOROURACIL, D-hydantoinase/dihydropyrimidinase, ZINC ION
Authors:Huang, Y.H, Chen, I.C, Huang, C.Y.
Deposit date:2019-07-30
Release date:2019-11-06
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.759 Å)
Cite:Crystal structure of dihydropyrimidinase in complex with anticancer drug 5-fluorouracil.
Biochem.Biophys.Res.Commun., 519, 2019
6L0I
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BU of 6l0i by Molmil
Crystal structure of dihydroorotase in complex with malate at pH6.5 from Saccharomyces cerevisiae
Descriptor: (2S)-2-hydroxybutanedioic acid, Dihydroorotase, ZINC ION
Authors:Guan, H.H, Huang, Y.H, Huang, C.Y, Chen, C.J.
Deposit date:2019-09-26
Release date:2020-12-02
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural basis for the interaction modes of dihydroorotase with the anticancer drugs 5-fluorouracil and 5-aminouracil.
Biochem.Biophys.Res.Commun., 551, 2021
6L0F
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BU of 6l0f by Molmil
Crystal structure of dihydroorotase in complex with 5-Aminouracil from Saccharomyces cerevisiae
Descriptor: 5-AMINO-1H-PYRIMIDINE-2,4-DIONE, Dihydroorotase, ZINC ION
Authors:Guan, H.H, Huang, Y.H, Huang, C.Y, Chen, C.J.
Deposit date:2019-09-26
Release date:2020-12-02
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3.26 Å)
Cite:Structural basis for the interaction modes of dihydroorotase with the anticancer drugs 5-fluorouracil and 5-aminouracil.
Biochem.Biophys.Res.Commun., 551, 2021
6L0K
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BU of 6l0k by Molmil
Crystal structure of dihydroorotase in complex with malate at pH9 from Saccharomyces cerevisiae
Descriptor: (2S)-2-hydroxybutanedioic acid, Dihydroorotase, ZINC ION
Authors:Guan, H.H, Huang, Y.H, Huang, C.Y, Chen, C.J.
Deposit date:2019-09-26
Release date:2020-12-02
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Structural basis for the interaction modes of dihydroorotase with the anticancer drugs 5-fluorouracil and 5-aminouracil.
Biochem.Biophys.Res.Commun., 551, 2021
6L0J
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BU of 6l0j by Molmil
Crystal structure of Dihydroorotase in complex with malate at pH7.5 from Saccharomyces cerevisiae
Descriptor: (2S)-2-hydroxybutanedioic acid, Dihydroorotase, ZINC ION
Authors:Guan, H.H, Huang, Y.H, Huang, C.Y, Chen, C.J.
Deposit date:2019-09-26
Release date:2020-12-02
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.933 Å)
Cite:Structural Analysis of Saccharomyces cerevisiae Dihydroorotase Reveals Molecular Insights into the Tetramerization Mechanism
Molecules, 2021
6L0H
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BU of 6l0h by Molmil
Crystal structure of dihydroorotase in complex with malate at pH7 from Saccharomyces cerevisiae
Descriptor: (2S)-2-hydroxybutanedioic acid, Dihydroorotase, ZINC ION
Authors:Guan, H.H, Huang, Y.H, Huang, C.Y, Chen, C.J.
Deposit date:2019-09-26
Release date:2020-12-02
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.054 Å)
Cite:Structural basis for the interaction modes of dihydroorotase with the anticancer drugs 5-fluorouracil and 5-aminouracil.
Biochem.Biophys.Res.Commun., 551, 2021
6I5C
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BU of 6i5c by Molmil
Long wavelength native-SAD phasing of Tubulin-Stathmin-TTL complex
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CALCIUM ION, CHLORIDE ION, ...
Authors:Basu, S, Olieric, V, Matsugaki, N, Kawano, Y, Takashi, T, Huang, C.Y, Leonarski, F, Yamada, Y, Vera, L, Olieric, N, Basquin, J, Wojdyla, J.A, Diederichs, K, Yamamoto, M, Bunk, O, Wang, M.
Deposit date:2018-11-13
Release date:2019-03-13
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:Long-wavelength native-SAD phasing: opportunities and challenges.
Iucrj, 6, 2019
7F2V
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BU of 7f2v by Molmil
Urate oxidase from Thermobispora bispora in apo form
Descriptor: DIMETHYL SULFOXIDE, SULFATE ION, Uricase
Authors:Chiu, Y.C, Hsu, T.S, Huang, C.Y, Hsu, C.H.
Deposit date:2021-06-14
Release date:2022-05-04
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structural and biochemical insights into a hyperthermostable urate oxidase from Thermobispora bispora for hyperuricemia and gout therapy.
Int.J.Biol.Macromol., 188, 2021
7F2W
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BU of 7f2w by Molmil
TbUox in complex with uric acid
Descriptor: URIC ACID, Uricase
Authors:Chiu, Y.C, Hsu, T.S, Huang, C.Y, Hsu, C.H.
Deposit date:2021-06-14
Release date:2022-05-04
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.16 Å)
Cite:Structural and biochemical insights into a hyperthermostable urate oxidase from Thermobispora bispora for hyperuricemia and gout therapy.
Int.J.Biol.Macromol., 188, 2021
7YM1
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BU of 7ym1 by Molmil
Structure of SsbA protein in complex with the anticancer drug 5-fluorouracil
Descriptor: 5-FLUOROURACIL, GLYCEROL, Single-stranded DNA-binding protein
Authors:Huang, Y.H, Yang, P.C, Chiang, W.Y, Lin, E.S, Huang, C.Y.
Deposit date:2022-07-27
Release date:2023-08-02
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.36 Å)
Cite:Crystal Structure of DNA Replication Protein SsbA Complexed with the Anticancer Drug 5-Fluorouracil.
Int J Mol Sci, 24, 2023
7VUM
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BU of 7vum by Molmil
Crystal structure of SSB complexed with que
Descriptor: 3,5,7,3',4'-PENTAHYDROXYFLAVONE, Single-stranded DNA-binding protein
Authors:Lin, E.S, Huang, Y.H, Huang, C.Y.
Deposit date:2021-11-03
Release date:2022-03-09
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.319 Å)
Cite:A Complexed Crystal Structure of a Single-Stranded DNA-Binding Protein with Quercetin and the Structural Basis of Flavonol Inhibition Specificity.
Int J Mol Sci, 23, 2022
6J0I
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BU of 6j0i by Molmil
Structure of [Co2+-(Chromomycin A3)2]-d(TTGGCGAA)2 complex
Descriptor: 1,2-HYDRO-1-OXY-3,4-HYDRO-3-(1-METHOXY-2-OXY-3,4-DIHYDROXYPENTYL)-8,9-DIHYROXY-7-METHYLANTHRACENE, 2,6-dideoxy-4-O-methyl-alpha-D-galactopyranose-(1-3)-(2R,3R,6R)-6-hydroxy-2-methyltetrahydro-2H-pyran-3-yl acetate, 3-C-methyl-4-O-acetyl-alpha-L-Olivopyranose-(1-3)-(2R,5S,6R)-6-methyltetrahydro-2H-pyran-2,5-diol-(1-3)-(2R,5S,6R)-6-methyltetrahydro-2H-pyran-2,5-diol, ...
Authors:Satange, R.B, Chuang, C.Y, Hou, M.H.
Deposit date:2018-12-24
Release date:2019-07-24
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Polymorphic G:G mismatches act as hotspots for inducing right-handed Z DNA by DNA intercalation.
Nucleic Acids Res., 47, 2019

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