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PDB: 220 results

6LPH
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BU of 6lph by Molmil
the Sufu-Fu complex crystal structure
Descriptor: Serine/threonine-protein kinase fused, Suppressor of fused homolog
Authors:Hua, L, Geng, W.
Deposit date:2020-01-10
Release date:2021-01-13
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.91 Å)
Cite:Structure of the Sufu-Fu complex at 1.9 Angstroms resolution.
To Be Published
4U3F
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BU of 4u3f by Molmil
Cytochrome bc1 complex from chicken with designed inhibitor bound
Descriptor: 1,2-dioleoyl-sn-glycero-3-phosphoethanolamine, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CARDIOLIPIN, ...
Authors:Huang, L.-S, Zhu, X.-L, Yang, G.F, Berry, E.A.
Deposit date:2014-07-21
Release date:2015-07-29
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (3.2312 Å)
Cite:Rational Design of Highly Potent and Slow-Binding Cytochrome bc1 Inhibitor as Fungicide by Computational Substitution Optimization
Sci Rep, 5, 2015
1XYH
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BU of 1xyh by Molmil
Crystal Structure of Recombinant Human Cyclophilin J
Descriptor: cyclophilin-like protein PPIL3b
Authors:Huang, L.-L, Zhao, X.-M, Huang, C.-Q, Yu, L, Xia, Z.-X.
Deposit date:2004-11-10
Release date:2005-03-15
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structure of recombinant human cyclophilin J, a novel member of the cyclophilin family.
Acta Crystallogr.,Sect.D, 61, 2005
6YL5
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BU of 6yl5 by Molmil
Crystal structure of the SAM-SAH riboswitch with SAH
Descriptor: Chains: A,B,C,D,E,F,G,H,I,J,K,L, MAGNESIUM ION, S-ADENOSYL-L-HOMOCYSTEINE, ...
Authors:Huang, L, Lilley, D.M.J.
Deposit date:2020-04-06
Release date:2020-07-22
Last modified:2024-05-15
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structure and ligand-induced folding of the SAM/SAH riboswitch.
Nucleic Acids Res., 2020
2H89
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BU of 2h89 by Molmil
Avian Respiratory Complex II with Malonate Bound
Descriptor: 1,2-dioleoyl-sn-glycero-3-phosphoethanolamine, FE2/S2 (INORGANIC) CLUSTER, FE3-S4 CLUSTER, ...
Authors:Huang, L.S, Shen, J.T, Wang, A.C, Berry, E.A.
Deposit date:2006-06-06
Release date:2006-06-20
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystallographic studies of the binding of ligands to the dicarboxylate site of Complex II, and the identity of the ligand in the
Biochim.Biophys.Acta, 1757
2H88
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BU of 2h88 by Molmil
Avian Mitochondrial Respiratory Complex II at 1.8 Angstrom Resolution
Descriptor: AZIDE ION, FE2/S2 (INORGANIC) CLUSTER, FE3-S4 CLUSTER, ...
Authors:Huang, L.S, Shen, J.T, Wang, A.C, Berry, E.A.
Deposit date:2006-06-06
Release date:2006-06-20
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.74 Å)
Cite:Crystallographic studies of the binding of ligands to the dicarboxylate site of Complex II, and the identity of the ligand in the
Biochim.Biophys.Acta, 1757
5G4U
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BU of 5g4u by Molmil
Association of three two-k-turn units based on Kt-7 3bU,3nU, forming a triangular-shaped structure
Descriptor: 50S RIBOSOMAL PROTEIN L7AE, HMKT-7
Authors:Huang, L, Lilley, D.M.J.
Deposit date:2016-05-17
Release date:2016-09-28
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:A Quasi-Cyclic RNA Nano-Scale Molecular Object Constructed Using Kink Turns.
Nanoscale, 8, 2016
1YQ4
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BU of 1yq4 by Molmil
Avian respiratory complex ii with 3-nitropropionate and ubiquinone
Descriptor: 1,2-Dioleoyl-sn-glycero-3-phosphoethanolamine, 3-NITROPROPANOIC ACID, Coenzyme Q10, ...
Authors:Huang, L, Sun, G, Cobessi, D, Wang, A, Shen, J.T, Tung, E.Y, Anderson, V.E, Berry, E.A.
Deposit date:2005-02-01
Release date:2005-12-20
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (2.33 Å)
Cite:3-Nitropropionic Acid Is a Suicide Inhibitor of Mitochondrial Respiration That, upon Oxidation by Complex II, Forms a Covalent Adduct with a Catalytic Base Arginine in the Active Site of the Enzyme
J.Biol.Chem., 281, 2006
1LFD
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BU of 1lfd by Molmil
CRYSTAL STRUCTURE OF THE ACTIVE RAS PROTEIN COMPLEXED WITH THE RAS-INTERACTING DOMAIN OF RALGDS
Descriptor: MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER, RALGDS, ...
Authors:Huang, L, Hofer, F, Martin, G.S, Kim, S.-H.
Deposit date:1998-04-29
Release date:1999-05-04
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural basis for the interaction of Ras with RalGDS.
Nat.Struct.Biol., 5, 1998
6YMI
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BU of 6ymi by Molmil
Crystal structure of the SAM-SAH riboswitch with AMP.
Descriptor: 5-BROMOCYTIDINE 5'-(DIHYDROGEN PHOSPHATE), ADENOSINE MONOPHOSPHATE, Chains: A,C,F,I,M,O, ...
Authors:Huang, L, Lilley, D.M.J.
Deposit date:2020-04-08
Release date:2020-07-22
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structure and ligand-induced folding of the SAM/SAH riboswitch.
Nucleic Acids Res., 48, 2020
6YMJ
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BU of 6ymj by Molmil
Crystal structure of the SAM-SAH riboswitch with adenosine.
Descriptor: 5-BROMOCYTIDINE 5'-(DIHYDROGEN PHOSPHATE), ADENOSINE, Chains: A,C,F,I,M,O, ...
Authors:Huang, L, Lilley, D.M.J.
Deposit date:2020-04-08
Release date:2020-07-22
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.04 Å)
Cite:Crystal structure and ligand-induced folding of the SAM/SAH riboswitch.
Nucleic Acids Res., 48, 2020
6YLB
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BU of 6ylb by Molmil
Crystal structure of the SAM-SAH riboswitch with SAM
Descriptor: Chains: A,C,F,I,M,O, Chains: B,D,G,J,N,P, S-ADENOSYLMETHIONINE
Authors:Huang, L, Lilley, D.M.J.
Deposit date:2020-04-07
Release date:2020-07-22
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.12 Å)
Cite:Crystal structure and ligand-induced folding of the SAM/SAH riboswitch.
Nucleic Acids Res., 2020
6YMK
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BU of 6ymk by Molmil
Crystal structure of the SAM-SAH riboswitch with AMP
Descriptor: 5'-DEOXY-5'-METHYLTHIOADENOSINE, Chains: A,C,F,I,M,O, Chains: B,D,G,J,N,P, ...
Authors:Huang, L, Lilley, D.M.J.
Deposit date:2020-04-08
Release date:2020-07-22
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.03 Å)
Cite:Crystal structure and ligand-induced folding of the SAM/SAH riboswitch.
Nucleic Acids Res., 48, 2020
1YQ3
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BU of 1yq3 by Molmil
Avian respiratory complex ii with oxaloacetate and ubiquinone
Descriptor: 1,2-dioleoyl-sn-glycero-3-phosphoethanolamine, Coenzyme Q10, (2Z,6E,10Z,14E,18E,22E,26Z)-isomer, ...
Authors:Huang, L, Cobessi, D, Tung, E.Y, Berry, E.A.
Deposit date:2005-02-01
Release date:2005-12-20
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:3-Nitropropionic Acid Is a Suicide Inhibitor of Mitochondrial Respiration That, upon Oxidation by Complex II, Forms a Covalent Adduct with a Catalytic Base Arginine in the Active Site of the Enzyme
J.Biol.Chem., 281, 2006
5LR4
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BU of 5lr4 by Molmil
RNA duplex has central consecutive GA pairs flanked by G-U basepairs with a methyl group on the adenine N6
Descriptor: RNA (5'-R(*GP*(CBV)P*CP*GP*GP*(6MZ)P*UP*GP*GP*C)-3'), SODIUM ION
Authors:Huang, L, Lilley, D.M.J.
Deposit date:2016-08-18
Release date:2017-06-21
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Control of box C/D snoRNP assembly by N(6)-methylation of adenine.
EMBO Rep., 18, 2017
2FBW
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BU of 2fbw by Molmil
Avian respiratory complex II with carboxin bound
Descriptor: (~{Z})-2-oxidanylbut-2-enedioic acid, 2-METHYL-N-PHENYL-5,6-DIHYDRO-1,4-OXATHIINE-3-CARBOXAMIDE, AZIDE ION, ...
Authors:Huang, L.S, Sun, G, Cobessi, D, Wang, A.C, Shen, J.T, Tung, E.Y, Anderson, V.E, Berry, E.A.
Deposit date:2005-12-10
Release date:2005-12-20
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.06 Å)
Cite:3-nitropropionic acid is a suicide inhibitor of mitochondrial respiration that, upon oxidation by complex II, forms a covalent adduct with a catalytic base arginine in the active site of the enzyme.
J.Biol.Chem., 281, 2006
8PN1
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BU of 8pn1 by Molmil
CryoEM structure of Nal1 protein, allele SPIKE, from Oryza sativa japonica group
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, Protein NARROW LEAF 1
Authors:Huang, L.Y, Rety, S, Xi, X.G.
Deposit date:2023-06-29
Release date:2024-04-17
Last modified:2024-06-05
Method:ELECTRON MICROSCOPY (2.4 Å)
Cite:The catalytic triad of rice NARROW LEAF1 involves H234.
Nat.Plants, 10, 2024
8PMI
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BU of 8pmi by Molmil
Structure of Nal1 indica cultivar IR64, construct 36-458 in presence of peptide from FZP protein
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, AMMONIUM ION, MAGNESIUM ION, ...
Authors:Huang, L.Y, Rety, S, Xi, X.G.
Deposit date:2023-06-28
Release date:2024-04-17
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (2.83 Å)
Cite:The catalytic triad of rice NARROW LEAF1 involves H234.
Nat.Plants, 10, 2024
8PME
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BU of 8pme by Molmil
Structure of Nal1 indica cultivar IR64, construct 88-458
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, Narrow leaf 1, ...
Authors:Huang, L.Y, Rety, S, Xi, X.G.
Deposit date:2023-06-28
Release date:2024-04-17
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:The catalytic triad of rice NARROW LEAF1 involves H234.
Nat.Plants, 10, 2024
8PMG
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BU of 8pmg by Molmil
Structure of Nal1 indica cultivar IR64, construct 36-458
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, PHOSPHATE ION, ...
Authors:Huang, L.Y, Rety, S, Xi, X.G.
Deposit date:2023-06-28
Release date:2024-04-17
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (3.29 Å)
Cite:The catalytic triad of rice NARROW LEAF1 involves H234.
Nat.Plants, 10, 2024
8PML
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BU of 8pml by Molmil
Structure of Nal1 protein , SPIKE allele from japonica rice, construct 46-458
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, Protein NARROW LEAF 1
Authors:Huang, L.Y, Rety, S, Xi, X.G.
Deposit date:2023-06-29
Release date:2024-04-17
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:The catalytic triad of rice NARROW LEAF1 involves H234.
Nat.Plants, 10, 2024
8PN2
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BU of 8pn2 by Molmil
CryoEM structure of Nal1 protein, allele IR64, from Oryza sativa indica cultivar
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, Protein NARROW LEAF 1
Authors:Huang, L.Y, Rety, S, Xi, X.G.
Deposit date:2023-06-29
Release date:2024-04-17
Last modified:2024-06-05
Method:ELECTRON MICROSCOPY (2.63 Å)
Cite:The catalytic triad of rice NARROW LEAF1 involves H234.
Nat.Plants, 10, 2024
8PMM
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BU of 8pmm by Molmil
Structure of Nal1 protein, allele SPIKE from japonica rice, construct 31-458
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, PHOSPHATE ION, ...
Authors:Huang, L.Y, Rety, S, Xi, X.G.
Deposit date:2023-06-29
Release date:2024-04-17
Last modified:2024-06-05
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:The catalytic triad of rice NARROW LEAF1 involves H234.
Nat.Plants, 10, 2024
3CWB
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BU of 3cwb by Molmil
Chicken Cytochrome BC1 Complex inhibited by an iodinated analogue of the polyketide Crocacin-D
Descriptor: 1,2-dioleoyl-sn-glycero-3-phosphoethanolamine, AZIDE ION, CARDIOLIPIN, ...
Authors:Huang, L, Cromartie, T, Viner, R, Crowley, P.J, Berry, E.A.
Deposit date:2008-04-21
Release date:2008-08-12
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (3.51 Å)
Cite:The role of molecular modeling in the design of analogues of the fungicidal natural products crocacins A and D.
Bioorg.Med.Chem., 16, 2008
6HCT
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BU of 6hct by Molmil
Crystal structure of Archeoglobus fulgidus L7Ae bound to its cognate UTR k-turn
Descriptor: 50S ribosomal protein L7Ae, RNA (5'-R(*GP*CP*CP*GP*AP*UP*GP*AP*AP*UP*G)-3'), RNA (5'-R(*GP*CP*CP*GP*AP*UP*GP*AP*AP*UP*GP*CP*AP*UP*GP*AP*AP*GP*C)-3'), ...
Authors:Huang, L, Lilley, D.M.J.
Deposit date:2018-08-16
Release date:2018-10-31
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (3.091 Å)
Cite:The role of RNA structure in translational regulation by L7Ae protein in archaea.
RNA, 25, 2019

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數據於2024-07-24公開中

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