Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 208 件

2P0P
DownloadVisualize
BU of 2p0p by Molmil
Calcium binding protein in the free form
分子名称: Alr1010 protein
著者Zhang, X, Hu, Y, Jin, C.
登録日2007-02-28
公開日2008-03-25
最終更新日2024-05-01
実験手法SOLUTION NMR
主引用文献Solution Structures of Ccbp from Anabaena Reveals a New Fold and Novel Calcium Binding Sites
To be Published
6KUZ
DownloadVisualize
BU of 6kuz by Molmil
E.coli beta-galactosidase (E537Q) in complex with fluorescent probe KSL01
分子名称: 3-(1,3-benzothiazol-2-yl)-2-[[4-[(2~{S},3~{R},4~{S},5~{R},6~{R})-6-(hydroxymethyl)-3,4,5-tris(oxidanyl)oxan-2-yl]oxyphenyl]methoxy]-5-methyl-benzaldehyde, Beta-galactosidase, DIMETHYL SULFOXIDE, ...
著者Chen, X, Hu, Y.L, Li, X.K, Guo, Y, Li, J.
登録日2019-09-03
公開日2020-07-08
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (2.83 Å)
主引用文献First-generation species-selective chemical probes for fluorescence imaging of human senescence-associated beta-galactosidase.
Chem Sci, 11, 2020
8DGB
DownloadVisualize
BU of 8dgb by Molmil
Crystal Structure of SARS-CoV-2 Main Protease (Mpro) Q192T Mutant in Complex with Inhibitor GC376
分子名称: (1R,2S)-2-({N-[(benzyloxy)carbonyl]-L-leucyl}amino)-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]propane-1-sulfonic acid, 3C-like proteinase nsp5
著者Lewandowski, E.M, Jacobs, L.M.C, Hu, Y, Tan, H, Wang, J, Chen, Y.
登録日2022-06-23
公開日2022-07-13
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.87 Å)
主引用文献Naturally Occurring Mutations of SARS-CoV-2 Main Protease Confer Drug Resistance to Nirmatrelvir.
Acs Cent.Sci., 9, 2023
8DCZ
DownloadVisualize
BU of 8dcz by Molmil
Crystal Structure of SARS-CoV-2 Main Protease (Mpro) M165Y Mutant in Complex with Nirmatrelvir
分子名称: (1R,2S,5S)-N-{(1E,2S)-1-imino-3-[(3S)-2-oxopyrrolidin-3-yl]propan-2-yl}-6,6-dimethyl-3-[3-methyl-N-(trifluoroacetyl)-L-valyl]-3-azabicyclo[3.1.0]hexane-2-carboxamide, 3C-like proteinase nsp5
著者Lewandowski, E.M, Hu, Y, Tan, H, Wang, J, Chen, Y.
登録日2022-06-17
公開日2022-07-13
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.38 Å)
主引用文献Naturally Occurring Mutations of SARS-CoV-2 Main Protease Confer Drug Resistance to Nirmatrelvir.
Acs Cent.Sci., 9, 2023
1LI4
DownloadVisualize
BU of 1li4 by Molmil
Human S-adenosylhomocysteine hydrolase complexed with neplanocin
分子名称: 3-(6-AMINO-PURIN-9-YL)-5-HYDROXYMETHYL-CYCLOPENTANE-1,2-DIOL, ISOPROPYL ALCOHOL, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, ...
著者Yang, X, Hu, Y, Yin, D.H, Turner, M.A, Wang, M, Borchardt, R.T, Howell, P.L, Kuczera, K, Schowen, R.L.
登録日2002-04-17
公開日2003-05-20
最終更新日2023-08-16
実験手法X-RAY DIFFRACTION (2.01 Å)
主引用文献Catalytic strategy of S-adenosyl-L-homocysteine hydrolase: Transition-state stabilization and the avoidance of abortive reactions
Biochemistry, 42, 2003
8DFN
DownloadVisualize
BU of 8dfn by Molmil
Crystal Structure of SARS-CoV-2 Main Protease (Mpro) H164N Mutant
分子名称: 3C-like proteinase nsp5
著者Lewandowski, E.M, Butler, S.G, Hu, Y, Tan, H, Wang, J, Chen, Y.
登録日2022-06-22
公開日2022-07-13
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.04 Å)
主引用文献Naturally Occurring Mutations of SARS-CoV-2 Main Protease Confer Drug Resistance to Nirmatrelvir.
Acs Cent.Sci., 9, 2023
4G3H
DownloadVisualize
BU of 4g3h by Molmil
Crystal structure of helicobacter pylori arginase
分子名称: Arginase (RocF), MANGANESE (II) ION
著者Zhang, J, Zhang, X, Li, D, Hu, Y, Zou, Q, Wang, D.
登録日2012-07-13
公開日2012-08-01
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献Structure and function studies on Helicobacter pylori arginase
To be Published
8DD1
DownloadVisualize
BU of 8dd1 by Molmil
SARS-CoV-2 Main Protease (Mpro) H164N Mutant in Complex with Inhibitor GC376
分子名称: (1S,2S)-2-({N-[(benzyloxy)carbonyl]-L-leucyl}amino)-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]propane-1-sulfonic acid, 3C-like proteinase nsp5
著者Lewandowski, E.M, Butler, S.G, Hu, Y, Tan, H, Wang, J, Chen, Y.
登録日2022-06-17
公開日2022-07-13
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.03 Å)
主引用文献Naturally Occurring Mutations of SARS-CoV-2 Main Protease Confer Drug Resistance to Nirmatrelvir.
Acs Cent.Sci., 9, 2023
8DFE
DownloadVisualize
BU of 8dfe by Molmil
Crystal Structure of SARS-CoV-2 Main Protease (Mpro) S144L Mutant
分子名称: 3C-like proteinase nsp5
著者Lewandowski, E.M, Jacobs, L.M.C, Hu, Y, Tan, H, Wang, J, Chen, Y.
登録日2022-06-22
公開日2022-07-13
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (1.89 Å)
主引用文献Naturally Occurring Mutations of SARS-CoV-2 Main Protease Confer Drug Resistance to Nirmatrelvir.
Acs Cent.Sci., 9, 2023
8DD9
DownloadVisualize
BU of 8dd9 by Molmil
Crystal Structure of SARS-CoV-2 Main Protease (Mpro) S144L Mutant in Complex with Inhibitor GC376
分子名称: (1R,2S)-2-({N-[(benzyloxy)carbonyl]-L-leucyl}amino)-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]propane-1-sulfonic acid, 3C-like proteinase nsp5
著者Lewandowski, E.M, Jacobs, L.M.C, Hu, Y, Tan, H, Wang, J, Chen, Y.
登録日2022-06-17
公開日2022-07-13
最終更新日2023-10-25
実験手法X-RAY DIFFRACTION (2.04 Å)
主引用文献Naturally Occurring Mutations of SARS-CoV-2 Main Protease Confer Drug Resistance to Nirmatrelvir.
Acs Cent.Sci., 9, 2023
7D11
DownloadVisualize
BU of 7d11 by Molmil
Solution structure of a WKRY DNA-binding domain
分子名称: WRKY transcription factor 1, ZINC ION
著者Li, Q.W, Hu, Y.F, Jin, C.W.
登録日2020-09-12
公開日2021-09-15
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献Structure of a WKRY DNA-binding domain
To Be Published
6UG0
DownloadVisualize
BU of 6ug0 by Molmil
N2-bound Nitrogenase MoFe-protein from Azotobacter vinelandii
分子名称: 3-HYDROXY-3-CARBOXY-ADIPIC ACID, FE (III) ION, FE(8)-S(7) CLUSTER, ...
著者Kang, W, Hu, Y, Ribbe, M.W.
登録日2019-09-25
公開日2020-06-24
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.83 Å)
主引用文献Structural evidence for a dynamic metallocofactor during N2reduction by Mo-nitrogenase.
Science, 368, 2020
4D8M
DownloadVisualize
BU of 4d8m by Molmil
Crystal structure of Bacillus thuringiensis Cry5B nematocidal toxin
分子名称: Pesticidal crystal protein cry5Ba
著者Fan, H, Hu, Y, Aroian, R.V, Ghosh, P, Berkeley Structural Genomics Center (BSGC)
登録日2012-01-10
公開日2012-12-19
最終更新日2013-02-20
実験手法X-RAY DIFFRACTION (2.3 Å)
主引用文献Structure and Glycolipid Binding Properties of the Nematicidal Protein Cry5B.
Biochemistry, 51, 2012
8EHM
DownloadVisualize
BU of 8ehm by Molmil
Crystal Structure of SARS-CoV-2 Main Protease (Mpro) S144F Mutant
分子名称: 3C-like proteinase nsp5
著者Lewandowski, E.M, Hu, Y, Tan, H, Wang, J, Chen, Y.
登録日2022-09-14
公開日2022-09-28
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.84 Å)
主引用文献Crystal Structure of SARS-CoV-2 Main Protease (Mpro) S144F Mutant
To Be Published
8EHJ
DownloadVisualize
BU of 8ehj by Molmil
Crystal Structure of SARS-CoV-2 Main Protease (Mpro) H172Q Mutant
分子名称: 3C-like proteinase nsp5
著者Lewandowski, E.M, Hu, Y, Tan, H, Wang, J, Chen, Y.
登録日2022-09-14
公開日2022-09-28
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.28 Å)
主引用文献Crystal Structure of SARS-CoV-2 Main Protease (Mpro) H172Q Mutant
To Be Published
5WYO
DownloadVisualize
BU of 5wyo by Molmil
Solution structure of E.coli HdeA
分子名称: Acid stress chaperone HdeA
著者Yang, C, Hu, Y, Jin, C.
登録日2017-01-14
公開日2017-11-22
最終更新日2024-10-09
実験手法SOLUTION NMR
主引用文献Characterizations of the Interactions between Escherichia coli Periplasmic Chaperone HdeA and Its Native Substrates during Acid Stress
Biochemistry, 56, 2017
6VXT
DownloadVisualize
BU of 6vxt by Molmil
Activated Nitrogenase MoFe-protein from Azotobacter vinelandii
分子名称: 3-HYDROXY-3-CARBOXY-ADIPIC ACID, FE (III) ION, FE(8)-S(7) CLUSTER, ...
著者Kang, W, Hu, Y, Ribbe, M.W.
登録日2020-02-24
公開日2020-06-24
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (1.74 Å)
主引用文献Structural evidence for a dynamic metallocofactor during N2reduction by Mo-nitrogenase.
Science, 368, 2020
3LKX
DownloadVisualize
BU of 3lkx by Molmil
Human nac dimerization domain
分子名称: Nascent polypeptide-associated complex subunit alpha, Transcription factor BTF3
著者Liu, Y, Hu, Y, Li, X, Niu, L, Teng, M.
登録日2010-01-28
公開日2010-03-23
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献The crystal structure of the human nascent polypeptide-associated complex domain reveals a nucleic acid-binding region on the NACA subunit
Biochemistry, 49, 2010
1XS3
DownloadVisualize
BU of 1xs3 by Molmil
Solution Structure Analysis of the XC975 protein
分子名称: hypothetical protein XC975
著者Chin, K.-H, Lin, F.-Y, Hu, Y.-C, Sze, K.-H, Lyu, P.-C, Chou, S.-H.
登録日2004-10-18
公開日2005-03-29
最終更新日2024-05-29
実験手法SOLUTION NMR
主引用文献Letter to the Editor: NMR structure note - Solution structure of a bacterial BolA-like protein XC975 from a plant pathogen Xanthomonas campestris pv. campestris
J.Biomol.Nmr, 31, 2005
2MOK
DownloadVisualize
BU of 2mok by Molmil
holo_FldA
分子名称: FLAVIN MONONUCLEOTIDE, Flavodoxin
著者Jin, C, Hu, Y, Ye, Q.
登録日2014-04-27
公開日2015-05-20
最終更新日2024-05-15
実験手法SOLUTION NMR
主引用文献NMR study of YqcA from Escherichia coli
To be Published
8IEX
DownloadVisualize
BU of 8iex by Molmil
Solution structure of AtWRKY11-DBD
分子名称: Probable WRKY transcription factor 11, ZINC ION
著者Dong, X, Hu, Y.F.
登録日2023-02-16
公開日2024-02-21
最終更新日2024-09-25
実験手法SOLUTION NMR
主引用文献Solution structure of the DNA binding domain of Arabidopsis transcription factor WRKY11.
Biochem.Biophys.Res.Commun., 653, 2023
8D4L
DownloadVisualize
BU of 8d4l by Molmil
Crystal Structure of SARS-CoV-2 Main Protease (Mpro) S144A Mutant
分子名称: 3C-like proteinase nsp5
著者Lewandowski, E.M, Hu, Y, Tan, H, Wang, J, Chen, Y.
登録日2022-06-02
公開日2022-07-13
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Naturally occurring mutations of SARS-CoV-2 main protease confer drug resistance to nirmatrelvir.
Biorxiv, 2022
8GQ6
DownloadVisualize
BU of 8gq6 by Molmil
Cryo-EM Structure of the KBTBD2-CUL3-Rbx1 dimeric complex
分子名称: Cullin-3, E3 ubiquitin-protein ligase RBX1, Kelch repeat and BTB domain-containing protein 2, ...
著者Sun, L, Chen, Z, Hu, Y, Mao, Q.
登録日2022-08-29
公開日2023-09-06
最終更新日2024-03-20
実験手法ELECTRON MICROSCOPY (3.96 Å)
主引用文献Dynamic molecular architecture and substrate recruitment of cullin3-RING E3 ligase CRL3 KBTBD2.
Nat.Struct.Mol.Biol., 31, 2024
8D4N
DownloadVisualize
BU of 8d4n by Molmil
Crystal Structure of SARS-CoV-2 Main Protease (Mpro) E166Q Mutant
分子名称: 3C-like proteinase nsp5
著者Lewandowski, E.M, Hu, Y, Tan, H, Wang, J, Chen, Y.
登録日2022-06-02
公開日2022-07-13
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献Naturally occurring mutations of SARS-CoV-2 main protease confer drug resistance to nirmatrelvir.
Biorxiv, 2022
8D4J
DownloadVisualize
BU of 8d4j by Molmil
Crystal Structure of SARS-CoV-2 Main Protease (Mpro) H172Y Mutant
分子名称: 3C-like proteinase nsp5, GLYCEROL
著者Lewandowski, E.M, Hu, Y, Tan, H, Wang, J, Chen, Y.
登録日2022-06-02
公開日2022-07-13
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (1.78 Å)
主引用文献Naturally occurring mutations of SARS-CoV-2 main protease confer drug resistance to nirmatrelvir.
Biorxiv, 2022

226262

件を2024-10-16に公開中

PDB statisticsPDBj update infoContact PDBjnumon