Loading
PDBj
メニューPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 111 件

4G0A
DownloadVisualize
BU of 4g0a by Molmil
Crystallographic Analysis of Rotavirus NSP2-RNA Complex Reveals Specific Recognition of 5'-GG Sequence for RTPase activity
分子名称: CHLORIDE ION, Non-structural protein 2, RNA (5'-R(P*GP*GP*U)-3'), ...
著者Hu, L, Prasad, B.V.V.
登録日2012-07-09
公開日2012-08-22
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.0995 Å)
主引用文献Crystallographic Analysis of Rotavirus NSP2-RNA Complex Reveals Specific Recognition of 5' GG Sequence for RTPase Activity.
J.Virol., 86, 2012
4G0J
DownloadVisualize
BU of 4g0j by Molmil
Crystallographic Analysis of Rotavirus NSP2-RNA Complex Reveals Specific Recognition of 5'-GG Sequence for RTPase activity
分子名称: Non-structural protein 2
著者Hu, L, Prasad, B.V.V.
登録日2012-07-09
公開日2012-08-22
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (3.398 Å)
主引用文献Crystallographic Analysis of Rotavirus NSP2-RNA Complex Reveals Specific Recognition of 5' GG Sequence for RTPase Activity.
J.Virol., 86, 2012
6PCU
DownloadVisualize
BU of 6pcu by Molmil
VP8* of a G2P[4] human rotavirus in complex with scFv antibody 9
分子名称: GLYCEROL, Outer capsid protein VP4, SULFATE ION, ...
著者Hu, L, Venkataram Prasad, B.V.
登録日2019-06-18
公開日2019-09-04
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献Human VP8* mAbs neutralize rotavirus selectively in human intestinal epithelial cells.
J.Clin.Invest., 130, 2019
5D9Y
DownloadVisualize
BU of 5d9y by Molmil
Crystal structure of TET2-5fC complex
分子名称: DNA (5'-D(*AP*CP*TP*GP*TP*(5FC)P*GP*AP*AP*GP*CP*T)-3'), DNA (5'-D(*AP*GP*CP*TP*TP*CP*GP*AP*CP*AP*GP*T)-3'), FE (III) ION, ...
著者Hu, L, Cheng, J, Rao, Q, Li, Z, Li, J, Xu, Y.
登録日2015-08-19
公開日2015-11-04
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.971 Å)
主引用文献Structural insight into substrate preference for TET-mediated oxidation.
Nature, 527, 2015
5DEU
DownloadVisualize
BU of 5deu by Molmil
Crystal structure of TET2-5hmC complex
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CHLORIDE ION, DNA (5'-D(*AP*CP*CP*AP*CP*(5HC)P*GP*GP*TP*GP*GP*T)-3'), ...
著者Hu, L, Cheng, J, Rao, Q, Li, Z, Li, J, Xu, Y.
登録日2015-08-26
公開日2015-11-04
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.801 Å)
主引用文献Structural insight into substrate preference for TET-mediated oxidation.
Nature, 527, 2015
7RSW
DownloadVisualize
BU of 7rsw by Molmil
Crystal structure of group B human rotavirus VP8*
分子名称: Outer capsid protein VP4, peptide
著者Hu, L, Salmen, W, Sankaran, B, Prasad, B.V.
登録日2021-08-11
公開日2022-07-20
最終更新日2024-05-22
実験手法X-RAY DIFFRACTION (1.32 Å)
主引用文献Novel fold of rotavirus glycan-binding domain predicted by AlphaFold2 and determined by X-ray crystallography.
Commun Biol, 5, 2022
7K6V
DownloadVisualize
BU of 7k6v by Molmil
Crystal Structure of Virus-like Particles of GII.4 Norovirus Houston virus (HOV)
分子名称: 1,2-ETHANEDIOL, CADMIUM ION, CHLORIDE ION, ...
著者Hu, L, Prasad, B.V.V.
登録日2020-09-21
公開日2022-03-02
最終更新日2023-10-18
実験手法X-RAY DIFFRACTION (3 Å)
主引用文献Crystal structure of GII.4 Norovirus capsid reveals inherent conformational flexibility of the capsid protein
To Be Published
4RPT
DownloadVisualize
BU of 4rpt by Molmil
The 1.35A structure of a viral RNase L antagonist reveals basis for the 2'-5'-oligoadenylate binding and enzyme activity.
分子名称: 1,2-ETHANEDIOL, Capping enzyme protein, MALONATE ION
著者Hu, L, Prasad, B.V.V.
登録日2014-10-31
公開日2015-04-29
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (1.35 Å)
主引用文献Structural basis for 2'-5'-oligoadenylate binding and enzyme activity of a viral RNase L antagonist.
J.Virol., 89, 2015
4DRR
DownloadVisualize
BU of 4drr by Molmil
Cell attachment protein VP8* of a human rotavirus specifically interacts with A-type histo-blood group antigen
分子名称: Outer capsid protein VP4, SODIUM ION
著者Hu, L, Crawford, S.E, Czako, R, Cortes-Penfield, N.W, Smith, D.F, Le Pendu, J, Estes, M.K, Prasad, B.V.V.
登録日2012-02-17
公開日2012-04-11
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Cell attachment protein VP8* of a human rotavirus specifically interacts with A-type histo-blood group antigen.
Nature, 485, 2012
4DS0
DownloadVisualize
BU of 4ds0 by Molmil
Cell attachment protein VP8* of a human rotavirus specifically interacts with A-type histo-blood group antigen
分子名称: Outer capsid protein VP4, alpha-L-fucopyranose-(1-2)-[2-acetamido-2-deoxy-alpha-D-galactopyranose-(1-3)]beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
著者Hu, L, Crawford, S.E, Czako, R, Cortes-Penfield, N.W, Smith, D.F, Le Pendu, J, Estes, M.K, Prasad, B.V.V.
登録日2012-02-17
公開日2012-04-11
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.56 Å)
主引用文献Cell attachment protein VP8* of a human rotavirus specifically interacts with A-type histo-blood group antigen.
Nature, 485, 2012
4DRV
DownloadVisualize
BU of 4drv by Molmil
Cell attachment protein VP8* of a human rotavirus specifically interacts with A-type histo-blood group antigen
分子名称: Outer capsid protein VP4, alpha-L-fucopyranose-(1-2)-[2-acetamido-2-deoxy-alpha-D-galactopyranose-(1-3)]alpha-D-galactopyranose
著者Hu, L, Crawford, S.E, Czako, R, Cortes-Penfield, N.W, Smith, D.F, Le Pendu, J, Estes, M.K, Prasad, B.V.V.
登録日2012-02-17
公開日2012-04-11
最終更新日2023-09-13
実験手法X-RAY DIFFRACTION (1.56 Å)
主引用文献Cell attachment protein VP8* of a human rotavirus specifically interacts with A-type histo-blood group antigen.
Nature, 485, 2012
4YG0
DownloadVisualize
BU of 4yg0 by Molmil
Structural basis of glycan recognition in neonate-specific rotaviruses
分子名称: Outer capsid protein VP4, beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-3)-beta-D-galactopyranose-(1-4)-beta-D-glucopyranose
著者Hu, L, Prasad, B.V.V.
登録日2015-02-25
公開日2015-09-30
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.285 Å)
主引用文献Structural basis of glycan specificity in neonate-specific bovine-human reassortant rotavirus.
Nat Commun, 6, 2015
4YFW
DownloadVisualize
BU of 4yfw by Molmil
Structural basis of glycan recognition in neonate-specific rotaviruses
分子名称: Outer capsid protein VP4
著者Hu, L, Prasad, B.V.V.
登録日2015-02-25
公開日2015-09-30
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.66 Å)
主引用文献Structural basis of glycan specificity in neonate-specific bovine-human reassortant rotavirus.
Nat Commun, 6, 2015
4YG6
DownloadVisualize
BU of 4yg6 by Molmil
Structural basis of glycan recognition in neonate-specific rotaviruses
分子名称: Outer capsid protein VP8*, PHOSPHATE ION, beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
著者Hu, L, Prasad, B.V.V.
登録日2015-02-25
公開日2015-09-30
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.46 Å)
主引用文献Structural basis of glycan specificity in neonate-specific bovine-human reassortant rotavirus.
Nat Commun, 6, 2015
4YE2
DownloadVisualize
BU of 4ye2 by Molmil
The 1.35 structure of a viral RNase L antagonist reveals basis for the 2'-5'-oligoadenylate binding and enzyme activity.
分子名称: ADENOSINE-2'-5'-DIPHOSPHATE, Capping enzyme protein, SULFATE ION
著者Hu, L, Sankaran, B, Prasad, B.V.V.
登録日2015-02-23
公開日2015-04-29
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (3.098 Å)
主引用文献Structural basis for 2'-5'-oligoadenylate binding and enzyme activity of a viral RNase L antagonist.
J.Virol., 89, 2015
4YFZ
DownloadVisualize
BU of 4yfz by Molmil
Structural basis of glycan recognition in neonate-specific rotaviruses
分子名称: Outer capsid protein VP4, beta-D-galactopyranose-(1-3)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-3)-beta-D-galactopyranose-(1-4)-beta-D-glucopyranose
著者Hu, L, Prasad, B.V.V.
登録日2015-02-25
公開日2015-09-30
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Structural basis of glycan specificity in neonate-specific bovine-human reassortant rotavirus.
Nat Commun, 6, 2015
4YG3
DownloadVisualize
BU of 4yg3 by Molmil
Structural basis of glycan recognition in neonate-specific rotaviruses
分子名称: Outer capsid protein VP4, SULFATE ION
著者Hu, L, Prasad, B.V.V.
登録日2015-02-25
公開日2015-09-30
最終更新日2023-09-27
実験手法X-RAY DIFFRACTION (2.285 Å)
主引用文献Structural basis of glycan specificity in neonate-specific bovine-human reassortant rotavirus.
Nat Commun, 6, 2015
3SHB
DownloadVisualize
BU of 3shb by Molmil
Crystal Structure of PHD Domain of UHRF1
分子名称: E3 ubiquitin-protein ligase UHRF1, Histone H3 peptide, ZINC ION
著者Hu, L, Li, Z, Wang, P, Lin, Y, Xu, Y.
登録日2011-06-16
公開日2011-08-24
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.8 Å)
主引用文献Crystal structure of PHD domain of UHRF1 and insights into recognition of unmodified histone H3 arginine residue 2.
Cell Res., 2011
4JW1
DownloadVisualize
BU of 4jw1 by Molmil
Crystal structure of N-terminal 618-residue fragment of LepB from Legionella pneumophila
分子名称: CITRATE ANION, Effector protein B, GLYCEROL
著者Hu, L, Yao, Q, Zhu, Y, Shao, F.
登録日2013-03-26
公開日2013-05-08
最終更新日2013-08-14
実験手法X-RAY DIFFRACTION (3.16 Å)
主引用文献Structural analyses of Legionella LepB reveal a new GAP fold that catalytically mimics eukaryotic RasGAP
Cell Res., 23, 2013
4NM6
DownloadVisualize
BU of 4nm6 by Molmil
Crystal structure of TET2-DNA complex
分子名称: 5'-D(*AP*CP*CP*AP*CP*(5CM)P*GP*GP*TP*GP*GP*T)-3', FE (II) ION, Methylcytosine dioxygenase TET2, ...
著者Hu, L, Li, Z, Cheng, J, Rao, Q, Gong, W, Liu, M, Wang, P, Xu, Y.
登録日2013-11-14
公開日2013-12-18
最終更新日2024-02-28
実験手法X-RAY DIFFRACTION (2.026 Å)
主引用文献Crystal Structure of TET2-DNA Complex: Insight into TET-Mediated 5mC Oxidation.
Cell(Cambridge,Mass.), 155, 2013
5VX9
DownloadVisualize
BU of 5vx9 by Molmil
VP8* of P[6] Human Rotavirus RV3 in complex with LNFP1
分子名称: Outer capsid protein VP4, SULFATE ION, alpha-L-fucopyranose-(1-2)-beta-D-galactopyranose-(1-3)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-3)-beta-D-galactopyranose-(1-4)-beta-D-glucopyranose
著者Hu, L, Venkataram Prasad, B.V.
登録日2017-05-23
公開日2018-07-18
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.822 Å)
主引用文献Glycan recognition in globally dominant human rotaviruses.
Nat Commun, 9, 2018
5VTH
DownloadVisualize
BU of 5vth by Molmil
CTX-M-14 P167S:E166A mutant
分子名称: Beta-lactamase
著者Hu, L, Patel, M, Sankaran, B, Prasad, B.V.V, Palzkill, T.
登録日2017-05-17
公開日2017-06-28
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2.2 Å)
主引用文献The Drug-Resistant Variant P167S Expands the Substrate Profile of CTX-M beta-Lactamases for Oxyimino-Cephalosporin Antibiotics by Enlarging the Active Site upon Acylation.
Biochemistry, 56, 2017
5VX5
DownloadVisualize
BU of 5vx5 by Molmil
VP8* of a G2P[4] Human Rotavirus in complex with LNFP1
分子名称: Outer capsid protein VP4, alpha-L-fucopyranose-(1-2)-beta-D-galactopyranose-(1-3)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-3)-beta-D-galactopyranose-(1-4)-beta-D-glucopyranose
著者Hu, L, Venkataram Prasad, B.V.
登録日2017-05-23
公開日2018-07-18
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.285 Å)
主引用文献Glycan recognition in globally dominant human rotaviruses.
Nat Commun, 9, 2018
5VX4
DownloadVisualize
BU of 5vx4 by Molmil
VP8* of a G2P[4] Human Rotavirus
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, Outer capsid protein VP4
著者Hu, L, Venkataram Prasad, B.V.
登録日2017-05-23
公開日2018-07-18
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (1.55 Å)
主引用文献Glycan recognition in globally dominant human rotaviruses.
Nat Commun, 9, 2018
5VX8
DownloadVisualize
BU of 5vx8 by Molmil
VP8* of P[6] Human Rotavirus RV3
分子名称: Outer capsid protein VP4, SULFATE ION
著者Hu, L, Venkataram Prasad, B.V.
登録日2017-05-23
公開日2018-07-18
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Glycan recognition in globally dominant human rotaviruses.
Nat Commun, 9, 2018

222624

件を2024-07-17に公開中

PDB statisticsPDBj update infoContact PDBjnumon