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PDB: 414 件

6XIR
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BU of 6xir by Molmil
Cryo-EM Structure of K63 Ubiquitinated Yeast Translocating Ribosome under Oxidative Stress
分子名称: 18S ribosomal RNA, 35S ribosomal RNA, 40S ribosomal protein S0-A, ...
著者Zhou, Y, Bartesaghi, A, Silva, G.M.
登録日2020-06-21
公開日2020-08-26
最終更新日2020-09-23
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Structural impact of K63 ubiquitin on yeast translocating ribosomes under oxidative stress.
Proc.Natl.Acad.Sci.USA, 117, 2020
6XIQ
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BU of 6xiq by Molmil
Cryo-EM Structure of K63R Ubiquitin Mutant Ribosome under Oxidative Stress
分子名称: 18S ribosomal RNA, 35S ribosomal RNA, 40S ribosomal protein S0-A, ...
著者Zhou, Y, Bartesaghi, A, Silva, G.M.
登録日2020-06-21
公開日2020-08-26
最終更新日2020-09-23
実験手法ELECTRON MICROSCOPY (4.2 Å)
主引用文献Structural impact of K63 ubiquitin on yeast translocating ribosomes under oxidative stress.
Proc.Natl.Acad.Sci.USA, 117, 2020
6N8O
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BU of 6n8o by Molmil
Cryo-EM structure of Rpl10-inserted (RI) pre-60S ribosomal subunit
分子名称: 5.8S rRNA, 5S rRNA, 60S ribosomal export protein NMD3, ...
著者Zhou, Y, Musalgaonkar, S, Johnson, A.W, Taylor, D.W.
登録日2018-11-29
公開日2019-03-13
最終更新日2020-01-08
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Tightly-orchestrated rearrangements govern catalytic center assembly of the ribosome.
Nat Commun, 10, 2019
6N8J
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BU of 6n8j by Molmil
Cryo-EM structure of late nuclear (LN) pre-60S ribosomal subunit
分子名称: 5.8S rRNA, 5S rRNA, 60S ribosomal protein L11-A, ...
著者Zhou, Y, Musalgaonkar, S, Johnson, A.W, Taylor, D.W.
登録日2018-11-29
公開日2019-03-13
最終更新日2020-01-08
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Tightly-orchestrated rearrangements govern catalytic center assembly of the ribosome.
Nat Commun, 10, 2019
6N8L
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BU of 6n8l by Molmil
Cryo-EM structure of early cytoplasmic-late (ECL) pre-60S ribosomal subunit
分子名称: 5.8S rRNA, 5S rRNA, 60S ribosomal export protein NMD3, ...
著者Zhou, Y, Musalgaonkar, S, Johnson, A.W, Taylor, D.W.
登録日2018-11-29
公開日2019-03-13
最終更新日2020-01-08
実験手法ELECTRON MICROSCOPY (3.6 Å)
主引用文献Tightly-orchestrated rearrangements govern catalytic center assembly of the ribosome.
Nat Commun, 10, 2019
6N8N
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BU of 6n8n by Molmil
Cryo-EM structure of Lsg1-engaged (LE) pre-60S ribosomal subunit
分子名称: 5.8S rRNA, 5S rRNA, 60S ribosomal export protein NMD3, ...
著者Zhou, Y, Musalgaonkar, S, Johnson, A.W, Taylor, D.W.
登録日2018-11-29
公開日2019-03-13
最終更新日2020-01-08
実験手法ELECTRON MICROSCOPY (3.8 Å)
主引用文献Tightly-orchestrated rearrangements govern catalytic center assembly of the ribosome.
Nat Commun, 10, 2019
6N8M
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BU of 6n8m by Molmil
Cryo-EM structure of pre-Lsg1 (PL) pre-60S ribosomal subunit
分子名称: 5.8S RNA, 5S rRNA, 60S ribosomal export protein NMD3, ...
著者Zhou, Y, Musalgaonkar, S, Johnson, A.W, Taylor, D.W.
登録日2018-11-29
公開日2019-03-13
最終更新日2020-01-08
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Tightly-orchestrated rearrangements govern catalytic center assembly of the ribosome.
Nat Commun, 10, 2019
6VCA
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BU of 6vca by Molmil
TB38 complex
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 5'-nucleotidase, ...
著者Zhou, Y.F, Lord, D.M.
登録日2019-12-20
公開日2020-11-11
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (3.73 Å)
主引用文献A highly potent CD73 biparatopic antibody blocks organization of the enzyme active site through dual mechanisms.
J.Biol.Chem., 295, 2020
6VC9
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BU of 6vc9 by Molmil
TB19 complex
分子名称: 1,2-ETHANEDIOL, 5'-nucleotidase, ecto (CD73), ...
著者Zhou, Y.F, Lord, D.M.
登録日2019-12-20
公開日2020-11-11
最終更新日2023-10-11
実験手法X-RAY DIFFRACTION (2.25 Å)
主引用文献A highly potent CD73 biparatopic antibody blocks organization of the enzyme active site through dual mechanisms.
J.Biol.Chem., 295, 2020
8CYS
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BU of 8cys by Molmil
CryoEM structures of amplified alpha-synuclein fibril class B type II with extended core from DLB case I
分子名称: Alpha-synuclein
著者Zhou, Y, Sokratian, A, Xu, E, Viverette, E, Dillard, L, Yuan, Y, Li, J.Y, Matarangas, A, Bouvette, J, Borgnia, M, Bartesaghi, A, West, A.
登録日2022-05-24
公開日2023-05-31
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Structural and functional landscape of alpha-synuclein fibril assemblies amplified from cerebrospinal fluid
To Be Published
8CYV
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BU of 8cyv by Molmil
CryoEM structures of amplified alpha-synuclein fibril class B mixed type I/II with extended core from DLB case II
分子名称: Alpha-synuclein
著者Zhou, Y, Sokratian, A, Xu, E, Viverette, E, Dillard, L, Yuan, Y, Li, J.Y, Matarangas, A, Bouvette, J, Borgnia, M, Bartesaghi, A, West, A.
登録日2022-05-24
公開日2023-05-31
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (3.5 Å)
主引用文献Structural and functional landscape of alpha-synuclein fibril assemblies amplified from cerebrospinal fluid
To Be Published
8CZ6
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BU of 8cz6 by Molmil
CryoEM structure of amplified alpha-synuclein fibril class A type I with extended core from DLB case X
分子名称: Alpha-synuclein
著者Zhou, Y, Sokratian, A, Xu, E, Viverette, E, Dillard, L, Yuan, Y, Li, J.Y, Matarangas, A, Bouvette, J, Borgnia, M, Bartesaghi, A, West, A.
登録日2022-05-24
公開日2023-05-31
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Structural and functional landscape of alpha-synuclein fibril assemblies amplified from cerebrospinal fluid
To Be Published
8CZ2
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BU of 8cz2 by Molmil
CryoEM structure of amplified alpha-synuclein fibril class A type I with extended core from DLB case VII
分子名称: Alpha-synuclein
著者Zhou, Y, Sokratian, A, Xu, E, Viverette, E, Dillard, L, Yuan, Y, Li, J.Y, Matarangas, A, Bouvette, J, Borgnia, M, Bartesaghi, A, West, A.
登録日2022-05-24
公開日2023-05-31
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Structural and functional landscape of alpha-synuclein fibril assemblies amplified from cerebrospinal fluid
To Be Published
8CYX
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BU of 8cyx by Molmil
CryoEM structure of amplified alpha-synuclein fibril class A type I with compact core from DLB case III
分子名称: Alpha-synuclein
著者Zhou, Y, Sokratian, A, Xu, E, Viverette, E, Dillard, L, Yuan, Y, Li, J.Y, Matarangas, A, Bouvette, J, Borgnia, M, Bartesaghi, A, West, A.
登録日2022-05-24
公開日2023-05-31
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Structural and functional landscape of alpha-synuclein fibril assemblies amplified from cerebrospinal fluid
To Be Published
8CYY
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BU of 8cyy by Molmil
CryoEM structure of amplified alpha-synuclein fibril class B mixed type I/II with extended core from DLB case V
分子名称: Alpha-synuclein
著者Zhou, Y, Sokratian, A, Xu, E, Viverette, E, Dillard, L, Yuan, Y, Li, J.Y, Matarangas, A, Bouvette, J, Borgnia, M, Bartesaghi, A, West, A.
登録日2022-05-24
公開日2023-05-31
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Structural and functional landscape of alpha-synuclein fibril assemblies amplified from cerebrospinal fluid
To Be Published
8CZ0
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BU of 8cz0 by Molmil
CryoEM structure of amplified alpha-synuclein fibril class B type I with extended core from DLB case VII
分子名称: Alpha-synuclein
著者Zhou, Y, Sokratian, A, Xu, E, Viverette, E, Dillard, L, Yuan, Y, Li, J.Y, Matarangas, A, Bouvette, J, Borgnia, M, Bartesaghi, A, West, A.
登録日2022-05-24
公開日2023-05-31
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (2.9 Å)
主引用文献Structural and functional landscape of alpha-synuclein fibril assemblies amplified from cerebrospinal fluid
To Be Published
8CYW
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BU of 8cyw by Molmil
CryoEM structures of amplified alpha-synuclein fibril class B type I with compact core from DLB case III
分子名称: Alpha-synuclein
著者Zhou, Y, Sokratian, A, Xu, E, Viverette, E, Dillard, L, Yuan, Y, Li, J.Y, Matarangas, A, Bouvette, J, Borgnia, M, Bartesaghi, A, West, A.
登録日2022-05-24
公開日2023-05-31
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (3.1 Å)
主引用文献Structural and functional landscape of alpha-synuclein fibril assemblies amplified from cerebrospinal fluid
To Be Published
8CYT
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BU of 8cyt by Molmil
CryoEM structures of amplified alpha-synuclein fibril class A type I with extended core from DLB case I
分子名称: Alpha-synuclein
著者Zhou, Y, Sokratian, A, Xu, E, Viverette, E, Dillard, L, Yuan, Y, Li, J.Y, Matarangas, A, Bouvette, J, Borgnia, M, Bartesaghi, A, West, A.
登録日2022-05-24
公開日2023-05-31
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Structural and functional landscape of alpha-synuclein fibril assemblies amplified from cerebrospinal fluid
To Be Published
8CZ1
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BU of 8cz1 by Molmil
CryoEM structure of amplified alpha-synuclein fibril class B type II with extended core from DLB case VII
分子名称: Alpha-synuclein
著者Zhou, Y, Sokratian, A, Xu, E, Viverette, E, Dillard, L, Yuan, Y, Li, J.Y, Matarangas, A, Bouvette, J, Borgnia, M, Bartesaghi, A, West, A.
登録日2022-05-24
公開日2023-05-31
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (3 Å)
主引用文献Structural and functional landscape of alpha-synuclein fibril assemblies amplified from cerebrospinal fluid
To Be Published
8CZ3
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BU of 8cz3 by Molmil
CryoEM structure of amplified alpha-synuclein fibril class B type I with extended core from DLB case X
分子名称: Alpha-synuclein
著者Zhou, Y, Sokratian, A, Xu, E, Viverette, E, Dillard, L, Yuan, Y, Li, J.Y, Matarangas, A, Bouvette, J, Borgnia, M, Bartesaghi, A, West, A.
登録日2022-05-24
公開日2023-05-31
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (3.2 Å)
主引用文献Structural and functional landscape of alpha-synuclein fibril assemblies amplified from cerebrospinal fluid
To Be Published
8D84
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BU of 8d84 by Molmil
E. faecium MurAA in complex with UDP-N-acetylmuramic acid (UNAM) and a covalent adduct of PEP with Cys119
分子名称: (2R)-2-{[(2R,3R,4R,5S,6R)-3-(acetylamino)-2-{[(S)-{[(R)-{[(2R,3S,4R,5R)-5-(2,4-dioxo-3,4-dihydropyrimidin-1(2H)-yl)-3,4-dihydroxytetrahydrofuran-2-yl]methoxy}(hydroxy)phosphoryl]oxy}(hydroxy)phosphoryl]oxy}-5-hydroxy-6-(hydroxymethyl)tetrahydro-2H-pyran-4-yl]oxy}propanoic acid, UDP-N-acetylglucosamine 1-carboxyvinyltransferase
著者Zhou, Y, Shamoo, Y.
登録日2022-06-07
公開日2023-07-05
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.65 Å)
主引用文献E. faecium MurAA in complex with fosfomycin and UNAG
To Be Published
6IQL
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BU of 6iql by Molmil
Crystal structure of dopamine receptor D4 bound to the subtype-selective ligand, L745870
分子名称: 3-{[4-(4-chlorophenyl)piperazin-1-yl]methyl}-1H-pyrrolo[2,3-b]pyridine, D(4) dopamine receptor,Soluble cytochrome b562,D(4) dopamine receptor
著者Zhou, Y, Cao, C, Zhang, X.C.
登録日2018-11-08
公開日2019-12-04
最終更新日2023-11-22
実験手法X-RAY DIFFRACTION (3.5 Å)
主引用文献Crystal structure of dopamine receptor D4 bound to the subtype selective ligand, L745870.
Elife, 8, 2019
8CYR
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BU of 8cyr by Molmil
Alpha-synuclein fibril from spontaneous control
分子名称: Alpha-synuclein
著者Zhou, Y, Sokratian, A, Xu, E, Viverette, E, Dillard, L, Yuan, Y, Li, J.Y, Matarangas, A, Bouvette, J, Borgnia, M, Bartesaghi, A, West, A.
登録日2022-05-24
公開日2023-05-31
最終更新日2024-06-12
実験手法ELECTRON MICROSCOPY (4.2 Å)
主引用文献Distinct cryo-EM structures and functions of alpha-synuclein fibrils amplified from cerebrospinal fluid
To Be Published
7YRZ
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BU of 7yrz by Molmil
Crystal structure of HCoV 229E main protease in complex with PF07321332
分子名称: (1R,2S,5S)-N-{(1E,2S)-1-imino-3-[(3S)-2-oxopyrrolidin-3-yl]propan-2-yl}-6,6-dimethyl-3-[3-methyl-N-(trifluoroacetyl)-L-valyl]-3-azabicyclo[3.1.0]hexane-2-carboxamide, 3C-like proteinase
著者Zhou, Y.R, Zeng, P, Zhou, X.L, Lin, C, Zhang, J, Yin, X.S, Li, J.
登録日2022-08-11
公開日2023-08-16
最終更新日2024-03-06
実験手法X-RAY DIFFRACTION (1.79 Å)
主引用文献Structural basis of main proteases of HCoV-229E bound to inhibitor PF-07304814 and PF-07321332.
Biochem.Biophys.Res.Commun., 657, 2023
8D82
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BU of 8d82 by Molmil
Cryo-EM structure of human IL-6 signaling complex in detergent: model containing full extracellular domains
分子名称: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Interleukin-6, ...
著者Zhou, Y, Franklin, M.C.
登録日2022-06-07
公開日2023-03-29
実験手法ELECTRON MICROSCOPY (3.22 Å)
主引用文献Structural insights into the assembly of gp130 family cytokine signaling complexes.
Sci Adv, 9, 2023

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件を2024-06-26に公開中

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