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PDB: 80 results

2XB3
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BU of 2xb3 by Molmil
The Structure of Cyanobacterial PsbP
Descriptor: PSBP PROTEIN, ZINC ION
Authors:Michoux, F, Takasaka, K, Nixon, P, Murray, J.W.
Deposit date:2010-04-03
Release date:2010-08-25
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:The Structure of Cyanop at 2.8A: Implications for the Evolution and Function of the Psbp Subunit of Photosystem II.
Biochemistry, 49, 2010
2XBG
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BU of 2xbg by Molmil
Crystal Structure of YCF48 from Thermosynechococcus elongatus
Descriptor: YCF48-LIKE PROTEIN
Authors:Michoux, F, Takasaka, K, Nixon, P, Murray, J.W.
Deposit date:2010-04-09
Release date:2011-04-13
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Ycf48 involved in the biogenesis of the oxygen-evolving photosystem II complex is a seven-bladed beta-propeller protein.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
2Y6X
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BU of 2y6x by Molmil
Structure of Psb27 from Thermosynechococcus elongatus
Descriptor: CHLORIDE ION, PHOTOSYSTEM II 11 KD PROTEIN
Authors:Michoux, F, Takasaka, K, Boehm, M, Nixon, P.J, Murray, J.W.
Deposit date:2011-01-27
Release date:2012-01-11
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Crystal Structure of the Psb27 Assembly Factor at 1.6A: Implications for Binding to Photosystem II.
Photosynth.Res., 110, 2012
7L97
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BU of 7l97 by Molmil
Crystal structure of STAMBPL1 in complex with an engineered binder
Descriptor: 1,2-ETHANEDIOL, AMSH-like protease, SULFATE ION, ...
Authors:Guo, Y, Dong, A, Hou, F, Li, Y, Zhang, W, Arrowsmith, C.H, Edwards, A.M, Tong, Y, Structural Genomics Consortium (SGC)
Deposit date:2021-01-02
Release date:2021-08-25
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.01 Å)
Cite:Structural and functional characterization of ubiquitin variant inhibitors for the JAMM-family deubiquitinases STAMBP and STAMBPL1.
J.Biol.Chem., 297, 2021
5VBD
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BU of 5vbd by Molmil
Crystal structure of a putative UBL domain of USP9X
Descriptor: UNKNOWN ATOM OR ION, USP9X
Authors:Dong, A, Chern, Y, Hou, F, Li, Y, Tempel, W, Bountra, C, Arrowsmith, C.H, Edwards, A.M, Tong, Y, Structural Genomics Consortium (SGC)
Deposit date:2017-03-29
Release date:2017-04-26
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Crystal structure of a putative UBL domain of USP9X
to be published
5YPX
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BU of 5ypx by Molmil
Crystal structure of calaxin with magnesium
Descriptor: Calaxin, MAGNESIUM ION
Authors:Shojima, T, Hou, F, Takahashi, Y, Okai, M, Mizuno, K, Inaba, K, Miyakawa, T, Tanokura, M.
Deposit date:2017-11-04
Release date:2018-03-14
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.64 Å)
Cite:Crystal structure of a Ca2+-dependent regulator of flagellar motility reveals the open-closed structural transition
Sci Rep, 8, 2018
5X9A
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BU of 5x9a by Molmil
Crystal structure of calaxin with calcium
Descriptor: 1,2-ETHANEDIOL, CALCIUM ION, Calaxin
Authors:Shojima, T, Hou, F, Takahashi, Y, Okai, M, Mizuno, K, Inaba, K, Miyakawa, T, Tanokura, M.
Deposit date:2017-03-06
Release date:2018-03-14
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Crystal structure of a Ca2+-dependent regulator of flagellar motility reveals the open-closed structural transition
Sci Rep, 8, 2018
3J6C
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BU of 3j6c by Molmil
Cryo-EM structure of MAVS CARD filament
Descriptor: Mitochondrial antiviral-signaling protein
Authors:Xu, H, He, X, Zheng, H, Huang, L.J, Hou, F, Yu, Z, de la Cruz, M.J, Borkowski, B, Zhang, X, Chen, Z.J, Jiang, Q.-X.
Deposit date:2014-02-04
Release date:2014-03-05
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (9.6 Å)
Cite:Structural basis for the prion-like MAVS filaments in antiviral innate immunity.
Elife, 3, 2014
3WGB
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BU of 3wgb by Molmil
Crystal structure of aeromonas jandaei L-allo-threonine aldolase
Descriptor: GLYCINE, L-allo-threonine aldolase, N-GLYCINE-[3-HYDROXY-2-METHYL-5-PHOSPHONOOXYMETHYL-PYRIDIN-4-YL-METHANE]
Authors:Qin, H.M, Imai, F.L, Miyakawa, T, Kataoka, M, Okai, M, Ohtsuka, J, Hou, F, Nagata, K, Shimizu, S, Tanokura, M.
Deposit date:2013-08-03
Release date:2014-07-09
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:L-allo-Threonine aldolase with an H128Y/S292R mutation from Aeromonas jandaei DK-39 reveals the structural basis of changes in substrate stereoselectivity.
Acta Crystallogr.,Sect.D, 70, 2014
3WGC
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BU of 3wgc by Molmil
Aeromonas jandaei L-allo-threonine aldolase H128Y/S292R double mutant
Descriptor: L-allo-threonine aldolase, N-GLYCINE-[3-HYDROXY-2-METHYL-5-PHOSPHONOOXYMETHYL-PYRIDIN-4-YL-METHANE]
Authors:Qin, H.M, Imai, F.L, Miyakawa, T, Kataoka, M, Okai, M, Ohtsuka, J, Hou, F, Nagata, K, Shimizu, S, Tanokura, M.
Deposit date:2013-08-03
Release date:2014-07-09
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:L-allo-Threonine aldolase with an H128Y/S292R mutation from Aeromonas jandaei DK-39 reveals the structural basis of changes in substrate stereoselectivity.
Acta Crystallogr.,Sect.D, 70, 2014
3WLX
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BU of 3wlx by Molmil
Crystal structure of low-specificity L-threonine aldolase from Escherichia coli
Descriptor: Low specificity L-threonine aldolase, N-GLYCINE-[3-HYDROXY-2-METHYL-5-PHOSPHONOOXYMETHYL-PYRIDIN-4-YL-METHANE]
Authors:Qin, H.-M, Imai, F.L, Miyakawa, T, Kataoka, M, Okai, M, Hou, F, Ohtsuka, J, Nagata, K, Shimizu, S, Tanokura, M.
Deposit date:2013-11-15
Release date:2014-12-17
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.51 Å)
Cite:Structure analysis of L-threonine aldolase from Escherichia coli unravels the low-specificity and thermostability
To be Published
3WWJ
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BU of 3wwj by Molmil
Crystal structure of an engineered sitagliptin-producing transaminase, ATA-117-Rd11
Descriptor: (R)-amine transaminase, PYRIDOXAL-5'-PHOSPHATE
Authors:Guan, L.J, Ohtsuka, J, Okai, M, Miyakawa, T, Mase, T, Zhi, Y, Hou, F, Ito, N, Yasohara, Y, Tanokura, M.
Deposit date:2014-06-18
Release date:2015-08-12
Last modified:2018-11-21
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:A new target region for changing the substrate specificity of amine transaminases.
Sci Rep, 5, 2015
3VXK
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BU of 3vxk by Molmil
Crystal structure of OsD14
Descriptor: Dwarf 88 esterase
Authors:Xue, Y.-L, Miyakawa, T, Hou, F, Qin, H.-M, Tanokura, M.
Deposit date:2012-09-18
Release date:2013-09-25
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Molecular mechanism of strigolactone perception by DWARF14
Nat Commun, 4, 2013
3WIO
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BU of 3wio by Molmil
Crystal structure of OSD14 in complex with hydroxy D-ring
Descriptor: (5R)-5-hydroxy-3-methylfuran-2(5H)-one, Probable strigolactone esterase D14
Authors:Xue, Y.-L, Miyakawa, T, Hou, F, Qin, H.-M, Tanokura, M.
Deposit date:2013-09-22
Release date:2013-10-23
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Molecular mechanism of strigolactone perception by DWARF14
Nat Commun, 4, 2013
6KXW
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BU of 6kxw by Molmil
Crystal structure of human aquaporin AQP7 in bound to glycerol
Descriptor: Aquaporin-7, GLYCEROL
Authors:Zhang, L, Yao, D, Zhou, F, Zhang, Q, Zhou, L, Cao, Y.
Deposit date:2019-09-13
Release date:2019-11-27
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3.7 Å)
Cite:The structural basis for glycerol permeation by human AQP7
Sci Bull (Beijing), 66, 2020
3ZPN
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BU of 3zpn by Molmil
Structure of Psb28
Descriptor: PHOTOSYSTEM II REACTION CENTER PSB28 PROTEIN
Authors:Bialek, W.J, Michoux, F, Nixon, P.J, Murray, J.W.
Deposit date:2013-02-28
Release date:2013-10-30
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.361 Å)
Cite:Crystal Structure of the Psb28 Accessory Factor of Thermosynechococcus Elongatus Photosystem II at 2.3 A
Photosynth.Res., 117, 2013
7BV1
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BU of 7bv1 by Molmil
Cryo-EM structure of the apo nsp12-nsp7-nsp8 complex
Descriptor: Non-structural protein 7, Non-structural protein 8, RNA-directed RNA polymerase, ...
Authors:Yin, W, Mao, C, Luan, X, Shen, D, Shen, Q, Su, H, Wang, X, Zhou, F, Zhao, W, Gao, M, Chang, S, Xie, Y.C, Tian, G, Jiang, H.W, Tao, S.C, Shen, J, Jiang, Y, Jiang, H, Xu, Y, Zhang, S, Zhang, Y, Xu, H.E.
Deposit date:2020-04-09
Release date:2020-04-22
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:Structural basis for inhibition of the RNA-dependent RNA polymerase from SARS-CoV-2 by remdesivir.
Science, 368, 2020
7BV2
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BU of 7bv2 by Molmil
The nsp12-nsp7-nsp8 complex bound to the template-primer RNA and triphosphate form of Remdesivir(RTP)
Descriptor: MAGNESIUM ION, Non-structural protein 7, Non-structural protein 8, ...
Authors:Yin, W, Mao, C, Luan, X, Shen, D, Shen, Q, Su, H, Wang, X, Zhou, F, Zhao, W, Gao, M, Chang, S, Xie, Y.C, Tian, G, Jiang, H.W, Tao, S.C, Shen, J, Jiang, Y, Jiang, H, Xu, Y, Zhang, S, Zhang, Y, Xu, H.E.
Deposit date:2020-04-09
Release date:2020-04-22
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (2.5 Å)
Cite:Structural basis for inhibition of the RNA-dependent RNA polymerase from SARS-CoV-2 by remdesivir.
Science, 368, 2020
5KLV
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BU of 5klv by Molmil
Structure of bos taurus cytochrome bc1 with fenamidone inhibited
Descriptor: (2R)-3-{[(S)-(2-aminoethoxy)(hydroxy)phosphoryl]oxy}-2-(tetradecanoyloxy)propyl octadecanoate, (5S)-5-methyl-2-(methylsulfanyl)-5-phenyl-3-(phenylamino)-3,5-dihydro-4H-imidazol-4-one, 1,2-DIHEXANOYL-SN-GLYCERO-3-PHOSPHOETHANOLAMINE, ...
Authors:Xia, D, Esser, L, Zhou, F, Zhou, Y, Xiao, Y, Tang, W.K, Yu, C.A, Qin, Z.
Deposit date:2016-06-25
Release date:2016-10-12
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.652 Å)
Cite:Hydrogen Bonding to the Substrate Is Not Required for Rieske Iron-Sulfur Protein Docking to the Quinol Oxidation Site of Complex III.
J.Biol.Chem., 291, 2016
6NHH
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BU of 6nhh by Molmil
Rhodobacter sphaeroides bc1 with azoxystrobin
Descriptor: 1,2-DIHEXANOYL-SN-GLYCERO-3-PHOSPHOETHANOLAMINE, Cytochrome b, Cytochrome c1, ...
Authors:Xia, D, Zhou, F, Yu, C.A.
Deposit date:2018-12-21
Release date:2019-06-19
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (3 Å)
Cite:Crystal structure of bacterial cytochromebc1in complex with azoxystrobin reveals a conformational switch of the Rieske iron-sulfur protein subunit.
J.Biol.Chem., 294, 2019
8TUP
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BU of 8tup by Molmil
Cryo-EM structure of the human MRS2 magnesium channel under Mg2+-free condition
Descriptor: MAGNESIUM ION, Magnesium transporter MRS2 homolog, mitochondrial
Authors:Lai, L.T.F, Balaraman, J, Zhou, F, Matthies, D.
Deposit date:2023-08-16
Release date:2023-09-13
Last modified:2024-05-01
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Cryo-EM structures of human magnesium channel MRS2 reveal gating and regulatory mechanisms.
Nat Commun, 14, 2023
8TUL
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BU of 8tul by Molmil
Cryo-EM structure of the human MRS2 magnesium channel under Mg2+ condition
Descriptor: MAGNESIUM ION, Magnesium transporter MRS2 homolog, mitochondrial
Authors:Lai, L.T.F, Balaraman, J, Zhou, F, Matthies, D.
Deposit date:2023-08-16
Release date:2023-09-13
Last modified:2024-05-01
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:Cryo-EM structures of human magnesium channel MRS2 reveal gating and regulatory mechanisms.
Nat Commun, 14, 2023
7V9M
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BU of 7v9m by Molmil
Cryo-EM structure of the GHRH-bound human GHRHR splice variant 1 complex
Descriptor: Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2, Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1, Guanine nucleotide-binding protein G(s) subunit alpha isoforms short, ...
Authors:Cong, Z.T, Zhou, F.L, Zhang, C, Zou, X.Y, Zhang, H.B, Wang, Y.Z, Zhou, Q.T, Cai, X.Q, Liu, Q.F, Li, J, Shao, L.J, Mao, C.Y, Wang, X, Wu, J.H, Xia, T, Zhao, L.H, Jiang, H.L, Zhang, Y, Xu, H.E, Chen, X, Yang, D.H, Wang, M.W.
Deposit date:2021-08-26
Release date:2021-10-20
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (3.29 Å)
Cite:Constitutive signal bias mediated by the human GHRHR splice variant 1.
Proc.Natl.Acad.Sci.USA, 118, 2021
5KO2
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BU of 5ko2 by Molmil
Mouse pgp 34 linker deleted mutant Hg derivative
Descriptor: MERCURY (II) ION, Multidrug resistance protein 1A
Authors:Xia, D, Esser, L, Zhou, F.
Deposit date:2016-06-29
Release date:2016-11-30
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Structures of the Multidrug Transporter P-glycoprotein Reveal Asymmetric ATP Binding and the Mechanism of Polyspecificity.
J. Biol. Chem., 292, 2017
5KLI
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BU of 5kli by Molmil
Rhodobacter sphaeroides bc1 with stigmatellin and antimycin
Descriptor: (1R)-2-{[(R)-(2-AMINOETHOXY)(HYDROXY)PHOSPHORYL]OXY}-1-[(DODECANOYLOXY)METHYL]ETHYL (9Z)-OCTADEC-9-ENOATE, (2R,3S,6S,7R,8R)-3-{[3-(FORMYLAMINO)-2-HYDROXYBENZOYL]AMINO}-8-HEXYL-2,6-DIMETHYL-4,9-DIOXO-1,5-DIOXONAN-7-YL (2S)-2-METHYLBUTANOATE, Cytochrome b, ...
Authors:Xia, D, Esser, L, Zhou, F, Tang, W.K, Yu, C.A.
Deposit date:2016-06-24
Release date:2016-10-12
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.996 Å)
Cite:Hydrogen Bonding to the Substrate Is Not Required for Rieske Iron-Sulfur Protein Docking to the Quinol Oxidation Site of Complex III.
J.Biol.Chem., 291, 2016

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