Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 300 results

4KSS
DownloadVisualize
BU of 4kss by Molmil
Crystal Structure of Vibrio cholerae ATPase GspsE Hexamer
Descriptor: Type II secretion system protein E, hemolysin-coregulated protein
Authors:Hol, W.G, Turley, S, Lu, C.Y, Park, Y.J.
Deposit date:2013-05-17
Release date:2013-09-04
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (7.58 Å)
Cite:Hexamers of the Type II Secretion ATPase GspE from Vibrio cholerae with Increased ATPase Activity.
Structure, 21, 2013
4KSR
DownloadVisualize
BU of 4ksr by Molmil
Crystal Structure of the Vibrio cholerae ATPase GspE Hexamer
Descriptor: Type II secretion system protein E, Hemolysin-coregulated protein
Authors:Hol, W.G, Turley, S, Lu, C.Y, Park, Y.J, Marionni, S.T, Lee, K, Patrick, M, Sandkvist, M, Bush, M, Shah, R.
Deposit date:2013-05-17
Release date:2013-09-04
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (4.2 Å)
Cite:Hexamers of the Type II Secretion ATPase GspE from Vibrio cholerae with Increased ATPase Activity.
Structure, 21, 2013
1RHD
DownloadVisualize
BU of 1rhd by Molmil
STRUCTURE OF BOVINE LIVER RHODANESE. I. STRUCTURE DETERMINATION AT 2.5 ANGSTROMS RESOLUTION AND A COMPARISON OF THE CONFORMATION AND SEQUENCE OF ITS TWO DOMAINS
Descriptor: RHODANESE
Authors:Hol, W.G.J, Ploegman, J.H, Kalk, K.H, Drent, G.
Deposit date:1977-11-23
Release date:1978-01-16
Last modified:2017-11-29
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structure of bovine liver rhodanese. I. Structure determination at 2.5 A resolution and a comparison of the conformation and sequence of its two domains.
J.Mol.Biol., 123, 1978
1SVV
DownloadVisualize
BU of 1svv by Molmil
Initial Stuctural Analysis of Leishmania major Threonine Aldolase
Descriptor: THREONINE ALDOLASE, UNKNOWN LIGAND
Authors:Hol, W.G.J, Robien, M.A, Structural Genomics of Pathogenic Protozoa Consortium (SGPP)
Deposit date:2004-03-30
Release date:2004-08-17
Last modified:2018-01-31
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Initial Structural Analysis of Leishmania major Threonine Aldolase
To be Published
2GQ2
DownloadVisualize
BU of 2gq2 by Molmil
Mycobacterium tuberculosis ThyX-NADP complex
Descriptor: GLYCEROL, IODIDE ION, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, ...
Authors:Sampathkumar, P, Turley, S, Sibley, C.H, Hol, W.G.
Deposit date:2006-04-19
Release date:2006-06-27
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:NADP+ expels both the co-factor and a substrate analog from the Mycobacterium tuberculosis ThyX active site: opportunities for anti-bacterial drug design.
J.Mol.Biol., 360, 2006
2ISY
DownloadVisualize
BU of 2isy by Molmil
Crystal structure of the nickel-activated two-domain iron-dependent regulator (IdeR)
Descriptor: Iron-dependent repressor ideR, NICKEL (II) ION, PHOSPHATE ION
Authors:Wisedchaisri, G, Chou, C.J, Wu, M, Roach, C, Rice, A.E, Holmes, R.K, Beeson, C, Hol, W.G.
Deposit date:2006-10-18
Release date:2007-02-13
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.955 Å)
Cite:Crystal structures, metal activation, and DNA-binding properties of two-domain IdeR from Mycobacterium tuberculosis
Biochemistry, 46, 2007
2ISZ
DownloadVisualize
BU of 2isz by Molmil
Crystal structure of a two-domain IdeR-DNA complex crystal form I
Descriptor: Iron-dependent repressor ideR, NICKEL (II) ION, SODIUM ION, ...
Authors:Wisedchaisri, G, Chou, C.J, Wu, M, Roach, C, Rice, A.E, Holmes, R.K, Beeson, C, Hol, W.G.
Deposit date:2006-10-18
Release date:2007-02-13
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.403 Å)
Cite:Crystal structures, metal activation, and DNA-binding properties of two-domain IdeR from Mycobacterium tuberculosis
Biochemistry, 46, 2007
2IT0
DownloadVisualize
BU of 2it0 by Molmil
Crystal structure of a two-domain IdeR-DNA complex crystal form II
Descriptor: ACETATE ION, Iron-dependent repressor ideR, NICKEL (II) ION, ...
Authors:Wisedchaisri, G, Chou, C.J, Wu, M, Roach, C, Rice, A.E, Holmes, R.K, Beeson, C, Hol, W.G.
Deposit date:2006-10-18
Release date:2007-02-13
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal structures, metal activation, and DNA-binding properties of two-domain IdeR from Mycobacterium tuberculosis
Biochemistry, 46, 2007
1YF5
DownloadVisualize
BU of 1yf5 by Molmil
Cyto-Epsl: The Cytoplasmic Domain Of Epsl, An Inner Membrane Component Of The Type II Secretion System Of Vibrio Cholerae
Descriptor: General secretion pathway protein L
Authors:Abendroth, J, Murphy, P, Mushtaq, A, Sandkvist, M, Bagdasarian, M, Hol, W.G.
Deposit date:2004-12-30
Release date:2005-05-03
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:The X-ray Structure of the Type II Secretion System Complex Formed by the N-terminal Domain of EpsE and the Cytoplasmic Domain of EpsL of Vibrio cholerae.
J.Mol.Biol., 348, 2005
6TIM
DownloadVisualize
BU of 6tim by Molmil
THE ADAPTABILITY OF THE ACTIVE SITE OF TRYPANOSOMAL TRIOSEPHOSPHATE ISOMERASE AS OBSERVED IN THE CRYSTAL STRUCTURES OF THREE DIFFERENT COMPLEXES
Descriptor: SN-GLYCEROL-3-PHOSPHATE, TRIOSEPHOSPHATE ISOMERASE
Authors:Noble, M.E.M, Wierenga, R.K, Hol, W.G.J.
Deposit date:1991-04-23
Release date:1992-10-15
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:The adaptability of the active site of trypanosomal triosephosphate isomerase as observed in the crystal structures of three different complexes.
Proteins, 10, 1991
1XDN
DownloadVisualize
BU of 1xdn by Molmil
High resolution crystal structure of an editosome enzyme from trypanosoma brucei: RNA editing ligase 1
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, RNA editing ligase MP52
Authors:Deng, J, Schnaufer, A, Salavati, R, Stuart, K.D, Hol, W.G.
Deposit date:2004-09-07
Release date:2004-12-07
Last modified:2014-09-10
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:High resolution crystal structure of a key editosome enzyme from Trypanosoma brucei: RNA editing ligase 1.
J.Mol.Biol., 343, 2004
2PHH
DownloadVisualize
BU of 2phh by Molmil
THE COENZYME ANALOGUE ADENOSINE 5-DIPHOSPHORIBOSE DISPLACES FAD IN THE ACTIVE SITE OF P-HYDROXYBENZOATE HYDROXYLASE. AN X-RAY CRYSTALLOGRAPHIC INVESTIGATION
Descriptor: ADENOSINE-5-DIPHOSPHORIBOSE, P-HYDROXYBENZOATE HYDROXYLASE, P-HYDROXYBENZOIC ACID
Authors:Van Derlaan, J.M, Drenth, J, Hol, W.G.J.
Deposit date:1989-06-19
Release date:1990-10-15
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:The coenzyme analogue adenosine 5-diphosphoribose displaces FAD in the active site of p-hydroxybenzoate hydroxylase. An x-ray crystallographic investigation.
Biochemistry, 28, 1989
4TIM
DownloadVisualize
BU of 4tim by Molmil
CRYSTALLOGRAPHIC AND MOLECULAR MODELING STUDIES ON TRYPANOSOMAL TRIOSEPHOSPHATE ISOMERASE: A CRITICAL ASSESSMENT OF THE PREDICTED AND OBSERVED STRUCTURES OF THE COMPLEX WITH 2-PHOSPHOGLYCERATE
Descriptor: 2-PHOSPHOGLYCERIC ACID, TRIOSEPHOSPHATE ISOMERASE
Authors:Nobel, M.E.M, Wierenga, R.K, Hol, W.G.J.
Deposit date:1991-04-11
Release date:1992-10-15
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystallographic and molecular modeling studies on trypanosomal triosephosphate isomerase: a critical assessment of the predicted and observed structures of the complex with 2-phosphoglycerate.
J.Med.Chem., 34, 1991
3EZJ
DownloadVisualize
BU of 3ezj by Molmil
Crystal structure of the N-terminal domain of the secretin GspD from ETEC determined with the assistance of a nanobody
Descriptor: CHLORIDE ION, General secretion pathway protein GspD, NANOBODY NBGSPD_7, ...
Authors:Korotkov, K.V, Pardon, E, Steyaert, J, Hol, W.G.
Deposit date:2008-10-22
Release date:2009-02-17
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal structure of the N-terminal domain of the secretin GspD from ETEC determined with the assistance of a nanobody.
Structure, 17, 2009
1B1B
DownloadVisualize
BU of 1b1b by Molmil
IRON DEPENDENT REGULATOR
Descriptor: PROTEIN (IRON DEPENDENT REGULATOR), SULFATE ION, ZINC ION
Authors:Pohl, E, Holmes, R.K, Hol, W.G.
Deposit date:1998-11-19
Release date:1999-12-03
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal structure of the iron-dependent regulator (IdeR) from Mycobacterium tuberculosis shows both metal binding sites fully occupied.
J.Mol.Biol., 285, 1999
1BI0
DownloadVisualize
BU of 1bi0 by Molmil
STRUCTURE OF APO-AND HOLO-DIPHTHERIA TOXIN REPRESSOR
Descriptor: DIPHTHERIA TOXIN REPRESSOR, SULFATE ION, ZINC ION
Authors:Pohl, E, Hol, W.G.
Deposit date:1998-06-21
Release date:1999-07-22
Last modified:2022-12-21
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Motion of the DNA-binding domain with respect to the core of the diphtheria toxin repressor (DtxR) revealed in the crystal structures of apo- and holo-DtxR.
J.Biol.Chem., 273, 1998
1C0W
DownloadVisualize
BU of 1c0w by Molmil
CRYSTAL STRUCTURE OF THE COBALT-ACTIVATED DIPHTHERIA TOXIN REPRESSOR-DNA COMPLEX REVEALS A METAL BINDING SH-LIKE DOMAIN
Descriptor: COBALT (II) ION, DIPHTHERIA TOXIN REPRESSOR, DNA (5'-D(P*AP*TP*TP*AP*GP*GP*TP*TP*AP*GP*CP*CP*TP*AP*CP*CP*CP*TP*AP*AP*T)-3'), ...
Authors:Pohl, E, Holmes, R.K, Hol, W.G.
Deposit date:1999-07-22
Release date:2000-07-22
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Crystal structure of a cobalt-activated diphtheria toxin repressor-DNA complex reveals a metal-binding SH3-like domain.
J.Mol.Biol., 292, 1999
3SOL
DownloadVisualize
BU of 3sol by Molmil
Crystal structure of the type 2 secretion system pilotin GspS
Descriptor: CHLORIDE ION, Type II secretion pathway related protein
Authors:Korotkov, K.V, Hol, W.G.J.
Deposit date:2011-06-30
Release date:2011-07-13
Last modified:2017-11-08
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of the pilotin from the enterohemorrhagic Escherichia coli type II secretion system.
J.Struct.Biol., 182, 2013
1A35
DownloadVisualize
BU of 1a35 by Molmil
HUMAN TOPOISOMERASE I/DNA COMPLEX
Descriptor: DNA (5'-D(*AP*AP*AP*AP*AP*GP*AP*CP*TP*TP*AP*GP*AP*AP*AP*AP*AP*(BRU)P*(BRU)P*TP*TP*T)-3'), DNA (5'-D(*AP*AP*AP*AP*AP*TP*+UP*+UP*+UP*+UP*CP*+UP*AP*AP*GP*TP*CP*TP*TP*TP*+ UP*T)-3'), PROTEIN (DNA TOPOISOMERASE I)
Authors:Redinbo, M.R, Stewart, L, Kuhn, P, Champoux, J.J, Hol, W.G.
Deposit date:1998-01-29
Release date:1998-08-28
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structures of human topoisomerase I in covalent and noncovalent complexes with DNA.
Science, 279, 1998
1B5S
DownloadVisualize
BU of 1b5s by Molmil
DIHYDROLIPOYL TRANSACETYLASE (E.C.2.3.1.12) CATALYTIC DOMAIN (RESIDUES 184-425) FROM BACILLUS STEAROTHERMOPHILUS
Descriptor: DIHYDROLIPOAMIDE ACETYLTRANSFERASE
Authors:Izard, T, Aevarsson, A, Allen, M.D, Westphal, A.H, Perham, R.N, De Kok, A, Hol, W.G.
Deposit date:1999-01-10
Release date:1999-02-16
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (4.4 Å)
Cite:Principles of quasi-equivalence and Euclidean geometry govern the assembly of cubic and dodecahedral cores of pyruvate dehydrogenase complexes.
Proc.Natl.Acad.Sci.USA, 96, 1999
2PC4
DownloadVisualize
BU of 2pc4 by Molmil
Crystal structure of fructose-bisphosphate aldolase from Plasmodium falciparum in complex with TRAP-tail determined at 2.4 angstrom resolution
Descriptor: Fructose-bisphosphate aldolase, PbTRAP
Authors:Bosch, J, Buscaglia, C.A, Krumm, B, Cardozo, T, Nussenzweig, V, Hol, W.G.J, Structural Genomics of Pathogenic Protozoa Consortium (SGPP)
Deposit date:2007-03-29
Release date:2007-04-17
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Aldolase provides an unusual binding site for thrombospondin-related anonymous protein in the invasion machinery of the malaria parasite.
Proc.Natl.Acad.Sci.Usa, 104, 2007
1RG1
DownloadVisualize
BU of 1rg1 by Molmil
Crystal structure of human Tyrosyl-DNA Phosphodiesterase complexed with vanadate, octopamine, and tetranucleotide AGTT
Descriptor: 4-(2S-AMINO-1-HYDROXYETHYL)PHENOL, 5'-D(*AP*GP*TP*T)-3', SPERMINE, ...
Authors:Davies, D.R, Interthal, H, Champoux, J.J, Hol, W.G.
Deposit date:2003-11-10
Release date:2004-03-02
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Explorations of peptide and oligonucleotide binding sites of tyrosyl-DNA phosphodiesterase using vanadate complexes.
J.Med.Chem., 47, 2004
1RGT
DownloadVisualize
BU of 1rgt by Molmil
Crystal structure of human Tyrosyl-DNA Phosphodiesterase complexed with vanadate, octopamine, and tetranucleotide AGTC
Descriptor: 4-(2R-AMINO-1-HYDROXYETHYL)PHENOL, 4-(2S-AMINO-1-HYDROXYETHYL)PHENOL, 5'-D(*AP*GP*TP*C)-3', ...
Authors:Davies, D.R, Interthal, H, Champoux, J.J, Hol, W.G.
Deposit date:2003-11-12
Release date:2004-03-02
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2 Å)
Cite:Explorations of peptide and oligonucleotide binding sites of tyrosyl-DNA phosphodiesterase using vanadate complexes.
J.Med.Chem., 47, 2004
1RFI
DownloadVisualize
BU of 1rfi by Molmil
Crystal structure of human Tyrosyl-DNA Phosphodiesterase complexed with vanadate, pentapeptide KLNYK, and tetranucleotide AGTC
Descriptor: 5'-D(*AP*GP*TP*C)-3', SPERMINE, Topoisomerase I-Derived Peptide, ...
Authors:Davies, D.R, Interthal, H, Champoux, J.J, Hol, W.G.
Deposit date:2003-11-10
Release date:2004-03-02
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Explorations of peptide and oligonucleotide binding sites of tyrosyl-DNA phosphodiesterase using vanadate complexes.
J.Med.Chem., 47, 2004
1RFF
DownloadVisualize
BU of 1rff by Molmil
Crystal structure of human Tyrosyl-DNA Phosphodiesterase complexed with vanadate, octapeptide KLNYYDPR, and tetranucleotide AGTT.
Descriptor: 5'-D(*AP*GP*TP*T)-3', SPERMINE, Topoisomerase I-Derived Peptide, ...
Authors:Davies, D.R, Interthal, H, Champoux, J.J, Hol, W.G.
Deposit date:2003-11-08
Release date:2004-03-02
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Explorations of peptide and oligonucleotide binding sites of tyrosyl-DNA phosphodiesterase using vanadate complexes.
J.Med.Chem., 47, 2004

225681

PDB entries from 2024-10-02

PDB statisticsPDBj update infoContact PDBjnumon