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PDB: 99 results

3K8Q
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BU of 3k8q by Molmil
Crystal structure of human purine nucleoside phosphorylase in complex with SerMe-Immucillin H
Descriptor: 7-({[2-hydroxy-1-(hydroxymethyl)ethyl]amino}methyl)-3,5-dihydro-4H-pyrrolo[3,2-d]pyrimidin-4-one, PHOSPHATE ION, Purine nucleoside phosphorylase
Authors:Ho, M, Almo, S.C, Scharmm, V.L.
Deposit date:2009-10-14
Release date:2010-03-02
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structure of human nucleoside phosphorylase in complex with SerMe-ImmH
Proc.Natl.Acad.Sci.USA, 2010
3BGT
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BU of 3bgt by Molmil
Structural Studies of Acetoacetate Decarboxylase
Descriptor: Probable acetoacetate decarboxylase
Authors:Ho, M, Allen, K.N.
Deposit date:2007-11-27
Release date:2008-12-23
Last modified:2017-10-25
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:The origin of the electrostatic perturbation in acetoacetate decarboxylase.
Nature, 459, 2009
3BH3
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BU of 3bh3 by Molmil
Crystal structure of acetoacetate decarboxylase from Chromobacterium violaceum in complex with acetyl acetone Schiff base intermediate
Descriptor: Acetoacetate decarboxylase, pentan-2-one
Authors:Ho, M, Allen, K.N.
Deposit date:2007-11-27
Release date:2008-12-23
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:The origin of the electrostatic perturbation in acetoacetate decarboxylase.
Nature, 459, 2009
3DHD
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BU of 3dhd by Molmil
Crystal structure of human NAMPT complexed with nicotinamide mononucleotide and pyrophosphate
Descriptor: BETA-NICOTINAMIDE RIBOSE MONOPHOSPHATE, MAGNESIUM ION, Nicotinamide phosphoribosyltransferase, ...
Authors:Ho, M, Burgos, E.S, Almo, S.C, Schramm, V.L.
Deposit date:2008-06-17
Release date:2009-08-18
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2 Å)
Cite:A phosphoenzyme mimic, overlapping catalytic sites and reaction coordinate motion for human NAMPT.
Proc.Natl.Acad.Sci.USA, 106, 2009
3DKJ
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BU of 3dkj by Molmil
Crystal structure of human NAMPT complexed with benzamide and phosphoribosyl pyrophosphate
Descriptor: 1-O-pyrophosphono-5-O-phosphono-alpha-D-ribofuranose, BENZAMIDE, Nicotinamide phosphoribosyltransferase
Authors:Ho, M, Burgos, E.S, Almo, S.C, Schramm, V.L.
Deposit date:2008-06-25
Release date:2009-08-18
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2 Å)
Cite:A phosphoenzyme mimic, overlapping catalytic sites and reaction coordinate motion for human NAMPT.
Proc.Natl.Acad.Sci.USA, 106, 2009
3DGR
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BU of 3dgr by Molmil
Crystal structure of human NAMPT complexed with ADP analogue
Descriptor: Nicotinamide phosphoribosyltransferase, PHOSPHOMETHYLPHOSPHONIC ACID ADENOSYL ESTER
Authors:Ho, M, Burgos, E.S, Almo, S.C, Schramm, V.L.
Deposit date:2008-06-15
Release date:2009-08-18
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:A phosphoenzyme mimic, overlapping catalytic sites and reaction coordinate motion for human NAMPT.
Proc.Natl.Acad.Sci.USA, 106, 2009
3DP9
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BU of 3dp9 by Molmil
Crystal structure of Vibrio cholerae 5'-methylthioadenosine/S-adenosyl homocysteine nucleosidase (MTAN) complexed with butylthio-DADMe-Immucillin A
Descriptor: (3R,4S)-1-[(4-amino-5H-pyrrolo[3,2-d]pyrimidin-7-yl)methyl]-4-[(butylsulfanyl)methyl]pyrrolidin-3-ol, IODIDE ION, MTA/SAH nucleosidase
Authors:Ho, M, Gutierrez, J.A, Crowder, T, Rinaldo-Matthis, A, Almo, S.C, Schramm, V.L.
Deposit date:2008-07-07
Release date:2009-03-10
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Transition state analogs of 5'-methylthioadenosine nucleosidase disrupt quorum sensing.
Nat.Chem.Biol., 5, 2009
3EEI
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BU of 3eei by Molmil
Crystal structure of 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase from neisseria meningitidis in complex with methylthio-immucillin-A
Descriptor: (3S,4R)-2-(4-AMINO-5H-PYRROLO[3,2-D]PYRIMIDIN-7-YL)-5-[(METHYLSULFANYL)METHYL]PYRROLIDINE-3,4-DIOL, 5-methylthioadenosine nucleosidase/S-adenosylhomocysteine nucleosidase
Authors:Ho, M, Rinaldo-matthis, A, Brown, R.L, Norris, G.E, Tyler, P.C, Furneaux, R.H, Almo, S.C, Schramm, V.L.
Deposit date:2008-09-04
Release date:2009-09-08
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.78 Å)
Cite:Crystal structure of 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase from neisseria meningitidis in complex with methylthio-immucillin-A
To be Published
5YTA
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BU of 5yta by Molmil
Pig Heart Lactate Dehydrogenase in complex with NADH and Oxamate
Descriptor: L-lactate dehydrogenase B chain, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, OXAMIC ACID
Authors:Ho, M.C.
Deposit date:2017-11-17
Release date:2018-11-21
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:pig heart lactate dehydrogenase in complex with NADH and oxamate
To Be Published
4MQ9
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BU of 4mq9 by Molmil
Crystal structure of Thermus thermophilus RNA polymerase holoenzyme in complex with GE23077
Descriptor: (2Z)-2-methylbut-2-enoic acid, DNA-directed RNA polymerase subunit alpha, DNA-directed RNA polymerase subunit beta, ...
Authors:Ho, M.X, Arnold, E, Ebright, R.H, Zhang, Y, Tuske, S.
Deposit date:2013-09-16
Release date:2014-05-07
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (3.35 Å)
Cite:GE23077 binds to the RNA polymerase 'i' and 'i+1' sites and prevents the binding of initiating nucleotides.
Elife, 3, 2014
3OZD
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BU of 3ozd by Molmil
Crystal Structure of human 5'-deoxy-5'-methyladenosine phosphorylase in complex with pCl-phenylthioDADMeImmA
Descriptor: (3R,4S)-1-[(4-amino-5H-pyrrolo[3,2-d]pyrimidin-7-yl)methyl]-4-{[(4-chlorophenyl)sulfanyl]methyl}pyrrolidin-3-ol, S-methyl-5'-thioadenosine phosphorylase
Authors:Ho, M, Guan, R, Almo, S.C, Schramm, V.L.
Deposit date:2010-09-24
Release date:2011-09-28
Last modified:2017-11-08
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal Structure of human 5'-deoxy-5'-methyladenosine phosphorylase
to be published
3OZC
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BU of 3ozc by Molmil
Crystal Structure of human 5'-deoxy-5'-methyladenosine phosphorylase in complex with pCl-phenylthioDADMeImmA
Descriptor: (3R,4S)-1-[(4-amino-5H-pyrrolo[3,2-d]pyrimidin-7-yl)methyl]-4-{[(4-chlorophenyl)sulfanyl]methyl}pyrrolidin-3-ol, PHOSPHATE ION, S-methyl-5'-thioadenosine phosphorylase
Authors:Ho, M, Guan, R, Almo, S.C, Schramm, V.L.
Deposit date:2010-09-24
Release date:2011-09-28
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.93 Å)
Cite:Crystal Structure of human 5'-deoxy-5'-methyladenosine phosphorylase
to be published
7WUL
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BU of 7wul by Molmil
Crystal structure of UBR bof from PRT6 (RDG pH5.5)
Descriptor: 3-mer peptide, E3 ubiquitin-protein ligase, ZINC ION
Authors:Ho, M.C, Cao, C.C.
Deposit date:2022-02-08
Release date:2023-02-08
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.58 Å)
Cite:Crystal structure of UBR box from PRT6
To Be Published
7WUN
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BU of 7wun by Molmil
Crystal structure of UBR bof from PRT6 (RSG)
Descriptor: 3-mer peptide, E3 ubiquitin-protein ligase, ZINC ION
Authors:Ho, M.C, Cao, C.C.
Deposit date:2022-02-08
Release date:2023-02-08
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.53 Å)
Cite:Crystal structure of UBR box from PRT6
To Be Published
7WUK
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BU of 7wuk by Molmil
Crystal structure of UBR bof from PRT6
Descriptor: E3 ubiquitin-protein ligase, ZINC ION
Authors:Ho, M.C, Lin, T.J.
Deposit date:2022-02-08
Release date:2023-02-08
Last modified:2024-05-29
Method:X-RAY DIFFRACTION (1.63 Å)
Cite:Crystal structure of UBR box from PRT6
To Be Published
7WUM
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BU of 7wum by Molmil
Crystal structure of UBR box from PRT6 (RDG pH 8.5)
Descriptor: 3-mer peptide, E3 ubiquitin-protein ligase, ZINC ION
Authors:Ho, M.C, Cao, C.C.
Deposit date:2022-02-08
Release date:2023-02-08
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.58 Å)
Cite:Crystal structure of UBR box from PRT6
To Be Published
3D0O
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BU of 3d0o by Molmil
Crystal structure of Lactate Dehydrogenase from Staphylococcus Aureus
Descriptor: L-lactate dehydrogenase 1
Authors:Ho, M, Gutierrez, J.A, Almo, S.C, Schramm, V.L.
Deposit date:2008-05-02
Release date:2009-05-12
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of Lactate Dehydrogenase from Staphylococcus Aureus
To be Published
3H3J
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BU of 3h3j by Molmil
Crystal structure of lactate dehydrogenase mutant (A85R) from staphylococcus aureus complexed with NAD and pyruvate
Descriptor: GLYCEROL, L-lactate dehydrogenase 1, NICOTINAMIDE-ADENINE-DINUCLEOTIDE, ...
Authors:Ho, M.-C, Almo, S.C, Schramm, V.L.
Deposit date:2009-04-16
Release date:2010-04-28
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of lactate dehydrogenase mutant (A85R) from staphylococcus aureus complexed with NAD and pyruvate
To be Published
3U96
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BU of 3u96 by Molmil
Crystal Structure of YopHQ357F(Catalytic Domain, Residues 163-468) in complex with pNCS
Descriptor: N,4-DIHYDROXY-N-OXO-3-(SULFOOXY)BENZENAMINIUM, SULFATE ION, Tyrosine-protein phosphatase yopH
Authors:Ho, M.C, Ke, S.
Deposit date:2011-10-17
Release date:2012-08-29
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Investigation of catalytic loop structure, dynamics, and function relationship of Yersinia protein tyrosine phosphatase by temperature-jump relaxation spectroscopy and X-ray structural determination.
J.Phys.Chem.B, 116, 2012
3CHG
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BU of 3chg by Molmil
The compatible solute-binding protein OpuAC from Bacillus subtilis in complex with DMSA
Descriptor: (dimethyl-lambda~4~-sulfanyl)acetic acid, Glycine betaine-binding protein
Authors:Smits, S.H.J, Hoing, M, Lecher, J, Jebbar, M, Schmitt, L, Bremer, E.
Deposit date:2008-03-09
Release date:2008-08-12
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:The Compatible-Solute-Binding Protein OpuAC from Bacillus subtilis: Ligand Binding, Site-Directed Mutagenesis, and Crystallographic Studies
J.Bacteriol., 190, 2008
8IMK
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BU of 8imk by Molmil
D3-D4, D1-D2, D'3-D'4, D'1-D'2 cylinder in cyanobacterial phycobilisome from Anthocerotibacter panamensis (Cluster C)
Descriptor: ApcA1, ApcA2, ApcB1, ...
Authors:Wang, C.H, Yang, C.H, Wu, H.Y, Jiang, H.W, Ho, M.C, Ho, M.Y.
Deposit date:2023-03-07
Release date:2023-10-25
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (2.48 Å)
Cite:A structure of the relict phycobilisome from a thylakoid-free cyanobacterium.
Nat Commun, 14, 2023
8IMJ
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BU of 8imj by Molmil
A'1-A'2, A'3-A'4, B1-B2, C1-C2 cylinder in cyanobacterial phycobilisome from Anthocerotibacter panamensis (Cluster B)
Descriptor: ApcA2, ApcB2, ApcB3, ...
Authors:Wang, C.H, Yang, C.H, Wu, H.Y, Jiang, H.W, Ho, M.C, Ho, M.Y.
Deposit date:2023-03-07
Release date:2023-10-25
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (2.59 Å)
Cite:A structure of the relict phycobilisome from a thylakoid-free cyanobacterium.
Nat Commun, 14, 2023
8IMI
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BU of 8imi by Molmil
A1-A2, A3-A4, B'1-B'2, C'1-C'2 cylinder in cyanobacterial phycobilisome from Anthocerotibacter panamensis (Cluster A)
Descriptor: ApcA2, ApcB2, ApcB3, ...
Authors:Wang, C.H, Yang, C.H, Wu, H.Y, Jiang, H.W, Ho, M.C, Ho, M.Y.
Deposit date:2023-03-07
Release date:2023-10-25
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (2.59 Å)
Cite:A structure of the relict phycobilisome from a thylakoid-free cyanobacterium.
Nat Commun, 14, 2023
8IML
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BU of 8iml by Molmil
Rs2I-Rs2II, Rs1I-Rs1II, RbI-RbII cylinder in cyanobacterial phycobilisome from Anthocerotibacter panamensis (Cluster D)
Descriptor: CpcA, CpcB, CpcD, ...
Authors:Wang, C.H, Yang, C.H, Wu, H.Y, Jiang, H.W, Ho, M.C, Ho, M.Y.
Deposit date:2023-03-07
Release date:2023-10-25
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (2.74 Å)
Cite:A structure of the relict phycobilisome from a thylakoid-free cyanobacterium.
Nat Commun, 14, 2023
8IMN
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BU of 8imn by Molmil
Rt1I-Rt1II, Rt2'I-Rt2'II, Rt3I-Rt3II cylinder in cyanobacterial phycobilisome from Anthocerotibacter panamensis (Cluster F)
Descriptor: CpcA, CpcB, CpcD, ...
Authors:Wang, C.H, Yang, C.H, Wu, H.Y, Jiang, H.W, Ho, M.C, Ho, M.Y.
Deposit date:2023-03-07
Release date:2023-10-25
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (3.07 Å)
Cite:A structure of the relict phycobilisome from a thylakoid-free cyanobacterium.
Nat Commun, 14, 2023

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數據於2024-07-24公開中

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