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PDB: 89 results

1JMX
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crystal structure of a quinohemoprotein amine dehydrogenase from pseudomonas putida
Descriptor: Amine Dehydrogenase, HEME C, NICKEL (II) ION
Authors:Satoh, A, Miyahara, I, Hirotsu, K.
Deposit date:2001-07-20
Release date:2002-01-16
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of quinohemoprotein amine dehydrogenase from Pseudomonas putida. Identification of a novel quinone cofactor encaged by multiple thioether cross-bridges.
J.Biol.Chem., 277, 2002
1JMZ
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crystal structure of a quinohemoprotein amine dehydrogenase from pseudomonas putida with inhibitor
Descriptor: Amine Dehydrogenase, HEME C, NICKEL (II) ION, ...
Authors:Satoh, A, Miyahara, I, Hirotsu, K.
Deposit date:2001-07-20
Release date:2002-01-16
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of quinohemoprotein amine dehydrogenase from Pseudomonas putida. Identification of a novel quinone cofactor encaged by multiple thioether cross-bridges.
J.Biol.Chem., 277, 2002
2A1H
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X-ray crystal structure of human mitochondrial branched chain aminotransferase (BCATm) complexed with gabapentin
Descriptor: ACETIC ACID, PYRIDOXAL-5'-PHOSPHATE, [1-(AMINOMETHYL)CYCLOHEXYL]ACETIC ACID, ...
Authors:Goto, M, Miyahara, I, Hirotsu, K, Conway, M, Yennawar, N, Islam, M.M, Hutson, S.M.
Deposit date:2005-06-20
Release date:2005-09-06
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural determinants for branched-chain aminotransferase isozyme-specific inhibition by the anticonvulsant drug gabapentin.
J.Biol.Chem., 280, 2005
2DKJ
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Crystal Structure of T.th.HB8 Serine Hydroxymethyltransferase
Descriptor: PYRIDOXAL-5'-PHOSPHATE, SULFATE ION, serine hydroxymethyltransferase
Authors:Kai, K, Goto, M, Miyahara, I, Hirotsu, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2006-04-11
Release date:2007-04-24
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.15 Å)
Cite:Crystal Structure of T.th.HB8 Serine Hydroxymethyltransferase
To be Published
1IS2
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Crystal Structure of Peroxisomal Acyl-CoA Oxidase-II from Rat Liver
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, acyl-CoA oxidase
Authors:Nakajima, Y, Miyahara, I, Hirotsu, K.
Deposit date:2001-11-07
Release date:2002-04-10
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Three-dimensional structure of the flavoenzyme acyl-CoA oxidase-II from rat liver, the peroxisomal counterpart of mitochondrial acyl-CoA dehydrogenase.
J.Biochem., 131, 2002
1V93
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5,10-Methylenetetrahydrofolate Reductase from Thermus thermophilus HB8
Descriptor: 1,4-DIETHYLENE DIOXIDE, 5,10-Methylenetetrahydrofolate reductase, FLAVIN-ADENINE DINUCLEOTIDE
Authors:Nakajima, Y, Miyahara, I, Hirotsu, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2004-01-20
Release date:2004-02-03
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal Structure of 5,10-Methylenetetrahydrofolate reductase from Thermus thermophilus HB8
To be Published
1VEF
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Acetylornithine aminotransferase from Thermus thermophilus HB8
Descriptor: Acetylornithine/acetyl-lysine aminotransferase, PYRIDOXAL-5'-PHOSPHATE
Authors:Matsumura, M, Goto, M, Omi, R, Miyahara, I, Hirotsu, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2004-03-30
Release date:2005-08-02
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Three-Dimensional Strutcure of Acetylornithine aminotransferase from Thermus thermophilus HB8
To be Published
1J21
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Crystal Structure of Thermus thermophilus HB8 Argininosuccinate Synthetase in complex with ATP and citrulline
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Argininosuccinate Synthetase, CITRULLINE
Authors:Goto, M, Hirotsu, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2002-12-24
Release date:2003-04-22
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structures of argininosuccinate synthetase in enzyme-ATP-substrates and enzyme-AMP-product forms
J.Biol.Chem., 278, 2003
1J1Z
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Crystal Structure of Thermus thermophilus HB8 Argininosuccinate Synthetase in complex with substrate
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, ASPARTIC ACID, Argininosuccinate Synthetase, ...
Authors:Goto, M, Hirotsu, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2002-12-24
Release date:2003-04-22
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structures of argininosuccinate synthetase in enzyme-ATP-substrates and enzyme-AMP-product forms
J.Biol.Chem., 278, 2003
2YRR
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hypothetical alanine aminotransferase (TTH0173) from Thermus thermophilus HB8
Descriptor: Aminotransferase, class V, PYRIDOXAL-5'-PHOSPHATE
Authors:Miyahara, I, Matsumura, M, Goto, M, Omi, R, Hirotsu, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-04-02
Release date:2008-04-15
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.86 Å)
Cite:hypothetical alanine aminotransferase (TTH0173) from Thermus thermophilus HB8
To be Published
2YRI
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Crystal structure of alanine-pyruvate aminotransferase with 2-methylserine
Descriptor: (S,E)-3-HYDROXY-2-((3-HYDROXY-2-METHYL-5-(PHOSPHONOOXYMETHYL)PYRIDIN-4-YL)METHYLENEAMINO)-2-METHYLPROPANOIC ACID, 4'-DEOXY-4'-AMINOPYRIDOXAL-5'-PHOSPHATE, Aminotransferase, ...
Authors:Miyahara, I, Matsumura, M, Goto, M, Omi, R, Hirotsu, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-04-02
Release date:2008-04-15
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:hypothetical alanine aminotransferase (TTHA0173) from Thermus thermophilus HB8
To be Published
3A9Z
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Crystal structure of ras selenocysteine lyase in complex with selenopropionate
Descriptor: 3-selanylpropanoic acid, PHOSPHATE ION, PYRIDOXAL-5'-PHOSPHATE, ...
Authors:Omi, R, Hirotsu, K.
Deposit date:2009-11-09
Release date:2010-03-16
Last modified:2013-10-30
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Reaction mechanism and molecular basis for selenium/sulfur discrimination of selenocysteine lyase.
J.Biol.Chem., 285, 2010
1KH3
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Crystal Structure of Thermus thermophilus HB8 Argininosuccinate Synthetase in complex with inhibitor
Descriptor: ARGININE, ASPARTIC ACID, Argininosuccinate Synthetase, ...
Authors:goto, m, Hirotsu, k, miyahara, i, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2001-11-29
Release date:2003-04-22
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Structures of Argininosuccinate Synthetase in Enzyme-ATP Substrates and Enzyme-AMP Product Forms: STEREOCHEMISTRY OF THE CATALYTIC REACTION
J.Biol.Chem., 278, 2003
1KH2
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Crystal Structure of Thermus thermophilus HB8 Argininosuccinate Synthetase in complex with ATP
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Argininosuccinate Synthetase
Authors:Goto, M, Nakajima, Y, Hirotsu, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2001-11-29
Release date:2002-04-03
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of argininosuccinate synthetase from Thermus thermophilus HB8. Structural basis for the catalytic action.
J.Biol.Chem., 277, 2002
2EJW
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Homoserine Dehydrogenase from Thermus thermophilus HB8
Descriptor: GLYCEROL, Homoserine dehydrogenase, MAGNESIUM ION, ...
Authors:Omi, R, Goto, M, Miyahara, I, Hirotsu, K.
Deposit date:2007-03-21
Release date:2008-02-12
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal Structure of Homoserine Dehydrogenase from Thermus thermophilus HB8
To be Published
1KH1
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Crystal Structure of Thermus thermophilus HB8 Argininosuccinate Synthetase
Descriptor: Argininosuccinate Synthetase, SULFATE ION
Authors:Goto, M, Nakajima, Y, Hirotsu, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2001-11-29
Release date:2002-04-03
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of argininosuccinate synthetase from Thermus thermophilus HB8. Structural basis for the catalytic action.
J.Biol.Chem., 277, 2002
1J20
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Crystal Structure of Thermus thermophilus HB8 Argininosuccinate Synthetase in complex with product
Descriptor: ADENOSINE MONOPHOSPHATE, ARGININOSUCCINATE, Argininosuccinate Synthetase, ...
Authors:Goto, M, Hirotsu, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2002-12-24
Release date:2003-04-22
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structures of argininosuccinate synthetase in enzyme-ATP-substrates and enzyme-AMP-product forms
J.Biol.Chem., 278, 2003
3A9Y
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Crystal structure of rat selenocysteine lyase in complex with L-cysteine
Descriptor: CYSTEINE, GLYCEROL, PHOSPHATE ION, ...
Authors:Omi, R, Hirotsu, K.
Deposit date:2009-11-09
Release date:2010-03-16
Last modified:2013-10-30
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Reaction mechanism and molecular basis for selenium/sulfur discrimination of selenocysteine lyase.
J.Biol.Chem., 285, 2010
1KOR
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Crystal Structure of Thermus thermophilus HB8 Argininosuccinate Synthetase in complex with inhibitors
Descriptor: ARGININE, Argininosuccinate Synthetase, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, ...
Authors:Goto, M, Nakajima, Y, Hirotsu, K, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2001-12-22
Release date:2002-04-03
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Crystal structure of argininosuccinate synthetase from Thermus thermophilus HB8. Structural basis for the catalytic action.
J.Biol.Chem., 277, 2002
3A9X
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Crystal structure of rat selenocysteine lyase
Descriptor: PHOSPHATE ION, PYRIDOXAL-5'-PHOSPHATE, Selenocysteine lyase
Authors:Omi, R, Hirotsu, K.
Deposit date:2009-11-08
Release date:2010-03-16
Last modified:2013-10-30
Method:X-RAY DIFFRACTION (2 Å)
Cite:Reaction mechanism and molecular basis for selenium/sulfur discrimination of selenocysteine lyase.
J.Biol.Chem., 285, 2010
2CWH
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Crystal Structure of delta1-piperideine-2-carboxylate reductase from Pseudomonas syringae complexed with NADPH and pyrrole-2-carboxylate
Descriptor: NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, PYRROLE-2-CARBOXYLATE, delta1-piperideine-2-carboxylate reductase
Authors:Goto, M, Muramatsu, H, Mihara, H, Kurihara, T, Esaki, N, Omi, R, Miyahara, I, Hirotsu, K.
Deposit date:2005-06-20
Release date:2005-10-04
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structures of Delta1-piperideine-2-carboxylate/Delta1-pyrroline-2-carboxylate reductase belonging to a new family of NAD(P)H-dependent oxidoreductases: conformational change, substrate recognition, and stereochemistry of the reaction
J.Biol.Chem., 280, 2005
2CWF
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Crystal Structure of delta1-piperideine-2-carboxylate reductase from Pseudomonas syringae complexed with NADPH
Descriptor: NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, delta1-piperideine-2-carboxylate reductase
Authors:Goto, M, Muramatsu, H, Mihara, H, Kurihara, T, Esaki, N, Omi, R, Miyahara, I, Hirotsu, K.
Deposit date:2005-06-20
Release date:2005-10-04
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structures of Delta1-piperideine-2-carboxylate/Delta1-pyrroline-2-carboxylate reductase belonging to a new family of NAD(P)H-dependent oxidoreductases: conformational change, substrate recognition, and stereochemistry of the reaction
J.Biol.Chem., 280, 2005
1IX6
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Aspartate Aminotransferase Active Site Mutant V39F
Descriptor: Aspartate Aminotransferase, PYRIDOXAL-5'-PHOSPHATE
Authors:Hayashi, H, Mizuguchi, H, Miyahara, I, Nakajima, Y, Hirotsu, K, Kagamiyama, H.
Deposit date:2002-06-14
Release date:2002-07-03
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Conformational change in aspartate aminotransferase on substrate binding induces strain in the catalytic group and enhances catalysis
J.BIOL.CHEM., 278, 2003
1IX8
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Aspartate Aminotransferase Active Site Mutant V39F/N194A
Descriptor: Aspartate Aminotransferase, PYRIDOXAL-5'-PHOSPHATE
Authors:Hayashi, H, Mizuguchi, H, Miyahara, I, Nakajima, Y, Hirotsu, K, Kagamiyama, H.
Deposit date:2002-06-14
Release date:2002-07-03
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Conformational change in aspartate aminotransferase on substrate binding induces strain in the catalytic group and enhances catalysis
J.BIOL.CHEM., 278, 2003
1IX7
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Aspartate Aminotransferase Active Site Mutant V39F maleate complex
Descriptor: Aspartate Aminotransferase, MALEIC ACID, PYRIDOXAL-5'-PHOSPHATE
Authors:Hayashi, H, Mizuguchi, H, Miyahara, I, Nakajima, Y, Hirotsu, K, Kagamiyama, H.
Deposit date:2002-06-14
Release date:2002-07-03
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Conformational change in aspartate aminotransferase on substrate binding induces strain in the catalytic group and enhances catalysis
J.BIOL.CHEM., 278, 2003

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