7ZJ2
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8QXB
| TDP-43 amyloid fibrils: Morphology-2 | Descriptor: | TAR DNA-binding protein 43 | Authors: | Sharma, K, Shenoy, J, Loquet, A, Schmidt, M, Faendrich, M. | Deposit date: | 2023-10-24 | Release date: | 2024-01-24 | Method: | ELECTRON MICROSCOPY (3.86 Å) | Cite: | Cryo-EM observation of the amyloid key structure of polymorphic TDP-43 amyloid fibrils. Nat Commun, 15, 2024
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8QXA
| TDP-43 amyloid fibrils: Morphology-1b | Descriptor: | TAR DNA-binding protein 43 | Authors: | Sharma, K, Shenoy, J, Loquet, A, Schmidt, M, Faendrich, M. | Deposit date: | 2023-10-24 | Release date: | 2024-01-24 | Method: | ELECTRON MICROSCOPY (4.05 Å) | Cite: | Cryo-EM observation of the amyloid key structure of polymorphic TDP-43 amyloid fibrils. Nat Commun, 15, 2024
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8QX9
| TDP-43 amyloid fibrils: Morphology-1a | Descriptor: | TAR DNA-binding protein 43 | Authors: | Sharma, K, Shenoy, J, Loquet, A, Schmidt, M, Faendrich, M. | Deposit date: | 2023-10-24 | Release date: | 2024-01-24 | Method: | ELECTRON MICROSCOPY (3.76 Å) | Cite: | Cryo-EM observation of the amyloid key structure of polymorphic TDP-43 amyloid fibrils. Nat Commun, 15, 2024
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1P0O
| HP (2-20) substitution of Trp for Gln and Asp at position 17 and 19 MODIFICATION IN SDS-D25 MICELLES | Descriptor: | 19-mer peptide from 50S ribosomal protein L1 | Authors: | Lee, K.H, Lee, D.G, Park, Y.K, Harm, K.S, Kim, Y.M. | Deposit date: | 2003-04-10 | Release date: | 2003-05-20 | Last modified: | 2021-11-10 | Method: | SOLUTION NMR | Cite: | Interactions between antimicrobial peptide, HP(2-20) derived from helicobacter pylori, and membrain studied by nmr spectroscopy To be published
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1P0L
| HP (2-20) Substitution GLN To TRP Modification In SDS-D25 MICELLES | Descriptor: | 19-mer peptide from 50S ribosomal protein L1 | Authors: | Lee, K.H, Lee, D.G, Park, Y.K, Harm, K.S, Kim, Y.M. | Deposit date: | 2003-04-10 | Release date: | 2003-05-20 | Last modified: | 2021-11-10 | Method: | SOLUTION NMR | Cite: | Interactions between antimicrobial peptide, HP(2-20) derived from helicobacter pylori, and membrain studied by nmr spectroscopy To be published
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1P5L
| HP (2-20) Substitution PHE5 to SER modification in sds-d25 micelles | Descriptor: | 19-mer peptide from 50S ribosomal protein L1 | Authors: | Lee, K.H, Lee, D.G, Park, Y.K, Harm, K.S, Kim, Y.M. | Deposit date: | 2003-04-27 | Release date: | 2003-06-03 | Last modified: | 2021-11-10 | Method: | SOLUTION NMR | Cite: | Interactions between antimicrobial peptide, HP(2-20) derived from helicobacter pylori, and membrain studied by nmr spectroscopy To be published
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1P0J
| HP (2-20) Substitution ASP To TRP Modification In SDS-D25 Micelles | Descriptor: | 19-mer peptide from 50S ribosomal protein L1 | Authors: | Lee, K.H, Lee, D.G, Park, Y.K, Harm, K.S, Kim, Y.M. | Deposit date: | 2003-04-10 | Release date: | 2003-05-20 | Last modified: | 2021-11-10 | Method: | SOLUTION NMR | Cite: | Interactions between antimicrobial peptide, HP(2-20) derived from helicobacter pylori, and membrain studied by nmr spectroscopy To be published
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1P5K
| HP (2-20) Substitution SER to LEU11 modification in sds-d25 micelles | Descriptor: | 19-mer peptide from 50S ribosomal protein L1 | Authors: | Lee, K.H, Lee, D.G, Park, Y.K, Harm, K.S, Kim, Y.M. | Deposit date: | 2003-04-27 | Release date: | 2003-06-03 | Last modified: | 2021-11-10 | Method: | SOLUTION NMR | Cite: | Interactions between antimicrobial peptide, HP(2-20) derived from helicobacter pylori, and membrain studied by nmr spectroscopy To be published
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1P0G
| Structure of Antimicrobial Peptide, HP (2-20) and its Analogues Derived from Helicobacter pylori, as Determined by 1H NMR Spectroscopy | Descriptor: | 19-mer peptide from 50S ribosomal protein L1 | Authors: | Lee, K.H, Lee, D.G, Park, Y.K, Harm, K.S, Kim, Y.M. | Deposit date: | 2003-04-10 | Release date: | 2003-05-20 | Last modified: | 2022-02-23 | Method: | SOLUTION NMR | Cite: | Interactions between antimicrobial peptide, HP(2-20) derived from helicobacter pylori, and membrain studied by nmr spectroscopy To be published
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5D9E
| Crystal Structure of the Proline-rich Lasso Peptide Caulosegnin II | Descriptor: | CHLORIDE ION, Caulosegnin II | Authors: | Fage, C.D, Hegemann, J.D, Harms, K, Marahiel, M.A. | Deposit date: | 2015-08-18 | Release date: | 2016-02-17 | Last modified: | 2019-05-08 | Method: | X-RAY DIFFRACTION (0.859 Å) | Cite: | The ring residue proline 8 is crucial for the thermal stability of the lasso peptide caulosegnin II. Mol Biosyst, 12, 2016
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2YAK
| Structure of death-associated protein Kinase 1 (dapk1) in complex with a ruthenium octasporine ligand (OSV) | Descriptor: | DEATH-ASSOCIATED PROTEIN KINASE 1, RUTHENIUM OCTASPORINE 4 | Authors: | Feng, L, Geisselbrecht, Y, Blanck, S, Wilbuer, A, Atilla-Gokcumen, G.E, Filippakopoulos, P, Kraeling, K, Celik, M.A, Harms, K, Maksimoska, J, Marmorstein, R, Frenking, G, Knapp, S, Essen, L.-O, Meggers, E. | Deposit date: | 2011-02-23 | Release date: | 2011-04-27 | Last modified: | 2024-05-01 | Method: | X-RAY DIFFRACTION (2.2 Å) | Cite: | Structurally Sophisticated Octahedral Metal Complexes as Highly Selective Protein Kinase Inhibitors. J.Am.Chem.Soc., 133, 2011
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2MFV
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5JQF
| Crystal structure of the lasso peptide Sphingopyxin I (SpI) | Descriptor: | Sphingopyxin I | Authors: | Fage, C.D, Hegemann, J.D, Harms, K, Bange, G, Marahiel, M.A. | Deposit date: | 2016-05-04 | Release date: | 2016-09-14 | Last modified: | 2021-06-16 | Method: | X-RAY DIFFRACTION (0.85 Å) | Cite: | Structure and Mechanism of the Sphingopyxin I Lasso Peptide Isopeptidase. Angew. Chem. Int. Ed. Engl., 55, 2016
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4AS0
| Cyclometalated Phthalimides as Protein Kinase Inhibitors | Descriptor: | PHTALIMIDE-RUTHENIUM COMPLEX, SERINE/THREONINE-PROTEIN KINASE PIM-1 | Authors: | Blanck, S, Geisselbrecht, Y, Middel, S, Mietke, T, Harms, K, Essen, L.-O, Meggers, E. | Deposit date: | 2012-04-27 | Release date: | 2012-10-03 | Last modified: | 2023-12-20 | Method: | X-RAY DIFFRACTION (2.3 Å) | Cite: | Bioactive Cyclometalated Phthalimides: Design, Synthesis and Kinase Inhibition. Dalton Trans, 41, 2012
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4NAG
| Xanthomonins I III are a New Class of Lasso Peptides Featuringa Seven-Membered Macrolactam Ring | Descriptor: | HEXANE-1,6-DIOL, Xanthomonin I | Authors: | Hegemann, J.D, Zimmermann, M, Zhu, S, Steuber, H, Harms, K, Xie, X, Marahiel, M.A. | Deposit date: | 2013-10-22 | Release date: | 2014-04-30 | Last modified: | 2014-05-21 | Method: | X-RAY DIFFRACTION (0.81 Å) | Cite: | Xanthomonins I-III: A New Class of Lasso Peptides with a Seven-Residue Macrolactam Ring. Angew.Chem.Int.Ed.Engl., 53, 2014
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4R6R
| Jacalin-carbohydrate interactions. Distortion of the ligand as a determinant of affinity. | Descriptor: | 1,2-ETHANEDIOL, 4-nitrophenyl beta-D-galactopyranoside, Agglutinin alpha chain, ... | Authors: | Abhinav, K.V, Sharma, K, Swaminathan, C.P, Surolia, A, Vijayan, M. | Deposit date: | 2014-08-26 | Release date: | 2015-02-18 | Last modified: | 2023-11-08 | Method: | X-RAY DIFFRACTION (1.38 Å) | Cite: | Jacalin-carbohydrate interactions: distortion of the ligand molecule as a determinant of affinity. Acta Crystallogr.,Sect.D, 71, 2015
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4R6Q
| Jacalin-carbohydrate interactions. Distortion of the ligand as a determinant of affinity. | Descriptor: | 1,2-ETHANEDIOL, Agglutinin alpha chain, Agglutinin beta-3 chain, ... | Authors: | Abhinav, K.V, Sharma, K, Swaminathan, C.P, Surolia, A, Vijayan, M. | Deposit date: | 2014-08-26 | Release date: | 2015-02-18 | Last modified: | 2023-11-08 | Method: | X-RAY DIFFRACTION (1.6 Å) | Cite: | Jacalin-carbohydrate interactions: distortion of the ligand molecule as a determinant of affinity. Acta Crystallogr.,Sect.D, 71, 2015
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4R6O
| Jacalin-carbohydrate interactions. Distortion of the ligand as a determinant of affinity. | Descriptor: | 1,2-ETHANEDIOL, 4-METHYL-2H-CHROMEN-2-ONE, Agglutinin alpha chain, ... | Authors: | Abhinav, K.V, Sharma, K, Swaminathan, C.P, Surolia, A, Vijayan, M. | Deposit date: | 2014-08-26 | Release date: | 2015-02-18 | Last modified: | 2023-11-08 | Method: | X-RAY DIFFRACTION (1.6 Å) | Cite: | Jacalin-carbohydrate interactions: distortion of the ligand molecule as a determinant of affinity. Acta Crystallogr.,Sect.D, 71, 2015
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4R6N
| Jacalin-carbohydrate interactions. Distortion of the ligand as a determinant of affinity | Descriptor: | 1,2-ETHANEDIOL, Agglutinin alpha chain, Agglutinin beta-3 chain, ... | Authors: | Abhinav, K.V, Sharma, K, Swaminathan, C.P, Surolia, A, Vijayan, M. | Deposit date: | 2014-08-26 | Release date: | 2015-02-18 | Last modified: | 2023-11-08 | Method: | X-RAY DIFFRACTION (1.67 Å) | Cite: | Jacalin-carbohydrate interactions: distortion of the ligand molecule as a determinant of affinity. Acta Crystallogr.,Sect.D, 71, 2015
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4R6P
| Jacalin-carbohydrate interactions. Distortion of the ligand as a determinant of affinity. | Descriptor: | 1,2-ETHANEDIOL, 4-METHYL-2H-CHROMEN-2-ONE, Agglutinin alpha chain, ... | Authors: | Abhinav, K.V, Sharma, K, Swaminathan, C.P, Surolia, A, Vijayan, M. | Deposit date: | 2014-08-26 | Release date: | 2015-02-18 | Last modified: | 2023-11-08 | Method: | X-RAY DIFFRACTION (1.7 Å) | Cite: | Jacalin-carbohydrate interactions: distortion of the ligand molecule as a determinant of affinity. Acta Crystallogr.,Sect.D, 71, 2015
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6H22
| Crystal structure of Mdm2 bound to a stapled peptide | Descriptor: | 12-(dimethylamino)-3,10-diethyl-N,N,N-trimethyl-3,10-dihydrodibenzo[3,4:7,8]cycloocta[1,2-d:5,6-d']bis([1,2,3]triazole)-5-aminium, E3 ubiquitin-protein ligase Mdm2, Stapled peptide | Authors: | Wang, X, Sharma, K, Spring, D.R, Hyvonen, M. | Deposit date: | 2018-07-12 | Release date: | 2019-07-31 | Last modified: | 2019-09-11 | Method: | X-RAY DIFFRACTION (2.006 Å) | Cite: | Water-soluble, stable and azide-reactive strained dialkynes for biocompatible double strain-promoted click chemistry. Org.Biomol.Chem., 17, 2019
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5J50
| Structure of tetrameric jacalin complexed with Gal beta-(1,3) GalNAc-alpha-OPNP | Descriptor: | 1,2-ETHANEDIOL, Agglutinin alpha chain, Agglutinin beta-3 chain, ... | Authors: | Abhinav, K.V, Sharma, K, Surolia, A, Vijayan, M. | Deposit date: | 2016-04-01 | Release date: | 2017-02-08 | Last modified: | 2023-11-08 | Method: | X-RAY DIFFRACTION (2.05 Å) | Cite: | Structure of tetrameric jacalin complexed with Gal beta-(1,3) GalNAc-alpha-OPNP To Be Published
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5J4T
| Structure of tetrameric jacalin complexed with GlcNAc beta-(1,3) Gal-beta-OMe | Descriptor: | 1,2-ETHANEDIOL, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-3)-methyl beta-D-galactopyranoside, Agglutinin alpha chain, ... | Authors: | Abhinav, K.V, Sharma, K, Surolia, A, Vijayan, M. | Deposit date: | 2016-04-01 | Release date: | 2017-02-08 | Last modified: | 2023-11-08 | Method: | X-RAY DIFFRACTION (1.94 Å) | Cite: | Distortion of the ligand molecule as a strategy for modulating binding affinity: Further studies involving complexes of jacalin with beta-substituted disaccharides. IUBMB Life, 69, 2017
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5J4X
| Structure of tetrameric jacalin complexed with Gal beta-(1,3) Gal-beta-OMe | Descriptor: | 1,2-ETHANEDIOL, Agglutinin alpha chain, Agglutinin beta-3 chain, ... | Authors: | Abhinav, K.V, Sharma, K, Surolia, A, Vijayan, M. | Deposit date: | 2016-04-01 | Release date: | 2017-02-08 | Last modified: | 2023-11-08 | Method: | X-RAY DIFFRACTION (1.65 Å) | Cite: | Distortion of the ligand molecule as a strategy for modulating binding affinity: Further studies involving complexes of jacalin with beta-substituted disaccharides. IUBMB Life, 69, 2017
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