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PDB: 366 results

3VRB
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BU of 3vrb by Molmil
Mitochondrial rhodoquinol-fumarate reductase from the parasitic nematode Ascaris suum with the specific inhibitor flutolanil and substrate fumarate
Descriptor: Cytochrome b-large subunit, FE2/S2 (INORGANIC) CLUSTER, FE3-S4 CLUSTER, ...
Authors:Shimizu, H, Shiba, T, Inaoka, D.K, Osanai, A, Kita, K, Sakamoto, K, Harada, S.
Deposit date:2012-04-07
Release date:2012-07-11
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.91 Å)
Cite:Crystal structure of mitochondrial quinol-fumarate reductase from the parasitic nematode Ascaris suum
J.Biochem., 151, 2012
3AEO
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BU of 3aeo by Molmil
Reaction intermediate structure of Entamoeba histolytica methionine gamma-lyase 1 containing methionine alpha, beta-enamine-pyridoxamine-5'-phosphate
Descriptor: (2E)-2-[({3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4-yl}methyl)amino]-4-(methylsulfanyl)but-2-enoic acid, GLYCEROL, Methionine gamma-lyase, ...
Authors:Karaki, T, Sato, D, Shimizu, A, Nozaki, T, Harada, S.
Deposit date:2010-02-10
Release date:2011-02-09
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Crystal structure of Entamoeba histolytica methionine gamma-lyase 1
To be Published
3ACZ
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BU of 3acz by Molmil
Crystal structure of Entamoeba histolytica methionine gamma-lyase 1
Descriptor: GLYCEROL, Methionine gamma-lyase, SULFATE ION
Authors:Karaki, T, Sato, D, Shimizu, A, Nozaki, T, Harada, S.
Deposit date:2010-01-13
Release date:2011-02-09
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (1.97 Å)
Cite:Crystal structure of Entamoeba histolytica methionine gamma-lyase 1
To be Published
4GEN
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BU of 4gen by Molmil
Crystal structure of Zucchini (monomer)
Descriptor: CHLORIDE ION, Mitochondrial cardiolipin hydrolase
Authors:Nishimasu, H, Fukuhara, S, Ishitani, R, Nureki, O.
Deposit date:2012-08-02
Release date:2012-10-17
Last modified:2017-11-15
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structure and function of Zucchini endoribonuclease in piRNA biogenesis
Nature, 491, 2012
2AHB
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BU of 2ahb by Molmil
X-ray crystal structure of R46A,R161A mutant of Mycobacterium tuberculosis FabH
Descriptor: Beta- ketoacyl-ACP synthase III
Authors:Brown, A.K, Sridharan, S, Kremer, L, Lindenberg, S, Dover, L.G, Sacchettini, J.C, Besra, G.S.
Deposit date:2005-07-27
Release date:2005-08-23
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2 Å)
Cite:Probing the Mechanism of the Mycobacterium tuberculosis {beta}-Ketoacyl-Acyl Carrier Protein Synthase III mtFabH: FACTORS INFLUENCING CATALYSIS AND SUBSTRATE SPECIFICITY
J.Biol.Chem., 280, 2005
1UHM
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BU of 1uhm by Molmil
Solution structure of the globular domain of linker histone homolog Hho1p from S. cerevisiae
Descriptor: Histone H1
Authors:Ono, K, Kusano, O, Shimotakahara, S, Shimizu, M, Yamazaki, T, Shindo, H, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2003-07-05
Release date:2003-12-16
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:The linker histone homolog Hho1p from Saccharomyces cerevisiae represents a winged helix-turn-helix fold as determined by NMR spectroscopy.
Nucleic Acids Res., 31, 2003
3VRA
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BU of 3vra by Molmil
Mitochondrial rhodoquinol-fumarate reductase from the parasitic nematode Ascaris suum with the specific inhibitor Atpenin A5
Descriptor: 3-[(2S,4S,5R)-5,6-DICHLORO-2,4-DIMETHYL-1-OXOHEXYL]-4-HYDROXY-5,6-DIMETHOXY-2(1H)-PYRIDINONE, Cytochrome b-large subunit, FE2/S2 (INORGANIC) CLUSTER, ...
Authors:Shimizu, H, Shiba, T, Inaoka, D.K, Osanai, A, Kita, K, Sakamoto, K, Harada, S.
Deposit date:2012-04-07
Release date:2013-04-10
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (3.44 Å)
Cite:Crystal structure of mitochondrial quinol-fumarate reductase from parasitic nematode Ascaris suum
To be Published
3VR9
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BU of 3vr9 by Molmil
Mitochondrial rhodoquinol-fumarate reductase from the parasitic nematode Ascaris suum with the specific inhibitor flutolanil
Descriptor: Cytochrome b-large subunit, FE2/S2 (INORGANIC) CLUSTER, FE3-S4 CLUSTER, ...
Authors:Shimizu, H, Shiba, T, Inaoka, D.K, Osanai, A, Kita, K, Sakamoto, K, Harada, S.
Deposit date:2012-04-07
Release date:2013-04-10
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (3.01 Å)
Cite:Crystal structure of mitochondrial quinol-fumarate reductase from parasitic nematode Ascaris suum
To be Published
2AJ9
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BU of 2aj9 by Molmil
X-ray crystal structure of W42A,R161A double mutant of Mycobacterium tuberculosis beta-ketoacyl-ACP synthase III
Descriptor: 3-oxoacyl-[acyl-carrier-protein] synthase III
Authors:Brown, A.K, Sridharan, S, Kremer, L, Lindenberg, S, Dover, L.G, Sacchettini, J.C, Besra, G.S.
Deposit date:2005-08-01
Release date:2005-08-30
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Probing the Mechanism of the Mycobacterium tuberculosis beta-Ketoacyl-Acyl Carrier Protein Synthase III mtFabH: Factors Influencing Catalysis And Substrate Specificity.
J.Biol.Chem., 280, 2005
3AEJ
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BU of 3aej by Molmil
Reaction intermediate structure of Entamoeba histolytica methionine gamma-lyase 1 tetramer containing Michaelis complex and methionine-pyridoxal-5'-phosphate
Descriptor: GLYCEROL, METHIONINE, Methionine gamma-lyase, ...
Authors:Karaki, T, Sato, D, Shimizu, A, Nozaki, T, Harada, S.
Deposit date:2010-02-10
Release date:2011-02-09
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.59 Å)
Cite:Crystal structure of Entamoeba histolytica methionine gamma-lyase 1
To be Published
3AEM
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BU of 3aem by Molmil
Reaction intermediate structure of Entamoeba histolytica methionine gamma-lyase 1 containing Michaelis complex and methionine imine-pyridoxamine-5'-phosphate
Descriptor: (2E)-2-[({3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4-yl}methyl)imino]-4-(methylsulfanyl)butanoic acid, GLYCEROL, METHIONINE, ...
Authors:Karaki, T, Sato, D, Shimizu, A, Nozaki, T, Harada, S.
Deposit date:2010-02-10
Release date:2011-02-09
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of Entamoeba histolytica methionine gamma-lyase 1
To be published
1JDY
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BU of 1jdy by Molmil
RABBIT MUSCLE PHOSPHOGLUCOMUTASE
Descriptor: CADMIUM ION, PHOSPHOGLUCOMUTASE, SULFATE ION
Authors:Ray Junior, W.J, Baranidharan, S, Liu, Y.
Deposit date:1996-07-11
Release date:1997-03-12
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:
To be Published
3AGR
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BU of 3agr by Molmil
Crystal structure of nucleoside triphosphate hydrolases from Neospora caninum
Descriptor: Nucleoside triphosphate hydrolase
Authors:Matoba, K, Shiba, T, Seiki, M, Asai, T, Harada, S.
Deposit date:2010-04-06
Release date:2011-04-06
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal structure of nucleoside triphosphate hydrolases from Neospora caninum
To be Published
3AEN
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BU of 3aen by Molmil
Reaction intermediate structure of Entamoeba histolytica methionine gamma-lyase 1 containing Michaelis complex and alpha-amino-alpha, beta-butenoic acid-pyridoxal-5'-phosphate
Descriptor: (2E)-2-{[(1E)-{3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4-yl}methylidene]amino}but-2-enoic acid, GLYCEROL, METHIONINE, ...
Authors:Karaki, T, Sato, D, Shimizu, A, Nozaki, T, Harada, S.
Deposit date:2010-02-10
Release date:2011-02-09
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of Entamoeba histolytica methionine gamma-lyase 1
To be Published
6JAF
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BU of 6jaf by Molmil
Crystal structure of Trypanosoma brucei gambiense glycerol kinase complex with PPi (pyrophosphatase reaction)
Descriptor: GLYCEROL, Glycerol kinase, PYROPHOSPHATE 2-
Authors:Balogun, E.O, Chishima, T, Ichinose, M, Inaoka, D.K, Kido, Y, Ibrahim, B, Bringaud, F, de Koning, H, McKerrow, J.H, Watanabe, Y, Nozaki, T, Michels, P.A.M, Harada, S, Kita, K, Shiba, T.
Deposit date:2019-01-24
Release date:2020-01-29
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Glycerol Kinase of African Human Trypanosomes Possesses a Pyrophosphatase Activity.
To Be Published
4JD4
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BU of 4jd4 by Molmil
Structure of Trypanosoma cruzi dihydroorotate dehydrogenase in complex with MII-4-065
Descriptor: 5-{2-[2-(hydroxymethyl)phenyl]ethyl}-2,6-dioxo-1,2,3,6-tetrahydropyrimidine-4-carboxylic acid, COBALT HEXAMMINE(III), Dihydroorotate dehydrogenase (fumarate), ...
Authors:Inaoka, D.K, Iida, M, Tabuchi, T, Lee, N, Hashimoto, S, Matsuoka, S, Kuranaga, T, Shiba, T, Sakamoto, K, Suzuki, S, Balogun, E.O, Nara, T, Aoki, T, Inoue, M, Honma, T, Tanaka, A, Harada, S, Kita, K.
Deposit date:2013-02-23
Release date:2014-02-26
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.51 Å)
Cite:Structure of Trypanosoma cruzi dihydroorotate dehydrogenase in complex with MII-4-065
To be Published
6JAE
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BU of 6jae by Molmil
Crystal structure of Trypanosoma brucei gambiense glycerol kinase complex with Pi (pyrophosphatase reaction)
Descriptor: GLYCEROL, Glycerol kinase, PHOSPHATE ION
Authors:Balogun, E.O, Chishima, T, Ichinose, M, Inaoka, D.K, Kido, Y, Ibrahim, B, Bringaud, F, de Koning, H, McKerrow, J.H, Watanabe, Y, Nozaki, T, Michels, P.A.M, Harada, S, Kita, K, Shiba, T.
Deposit date:2019-01-24
Release date:2020-01-29
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Glycerol Kinase of African Human Trypanosomes Possesses a Pyrophosphatase Activity.
To Be Published
4JDB
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BU of 4jdb by Molmil
Structure of Trypanosoma cruzi dihydroorotate dehydrogenase in complex with MII-5-005
Descriptor: 5-[2-(7-methoxynaphthalen-2-yl)ethyl]-2,6-dioxo-1,2,3,6-tetrahydropyrimidine-4-carboxylic acid, COBALT HEXAMMINE(III), Dihydroorotate dehydrogenase (fumarate), ...
Authors:Inaoka, D.K, Iida, M, Tabuchi, T, Lee, N, Hashimoto, S, Matsuoka, S, Kuranaga, T, Shiba, T, Sakamoto, K, Suzuki, S, Balogun, E.O, Nara, T, Aoki, T, Inoue, M, Honma, T, Tanaka, A, Harada, S, Kita, K.
Deposit date:2013-02-24
Release date:2014-02-26
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.82 Å)
Cite:Structure of Trypanosoma cruzi dihydroorotate dehydrogenase in complex with MII-5-005
To be Published
4JEV
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BU of 4jev by Molmil
N-acetylornithine aminotransferase from S. typhimurium complexed with gabaculine
Descriptor: 3-[O-PHOSPHONOPYRIDOXYL]--AMINO-BENZOIC ACID, ACETATE ION, Acetylornithine/succinyldiaminopimelate aminotransferase, ...
Authors:Bisht, S, Bharath, S.R, Murthy, M.R.N.
Deposit date:2013-02-27
Release date:2014-03-26
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (1.67 Å)
Cite:Conformational transitions, ligand specificity and catalysis in N-acetylornithine aminotransferase: Implications on drug designing and rational enzyme engineering in omega aminotransferases.
To be Published
4JEW
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BU of 4jew by Molmil
N-acetylornithine aminotransferase from S. typhimurium complexed with L-canaline
Descriptor: (2S)-2-azanyl-4-[(E)-[2-methyl-3-oxidanyl-5-(phosphonooxymethyl)pyridin-4-yl]methylideneamino]oxy-butanoic acid, 1,2-ETHANEDIOL, ACETATE ION, ...
Authors:Bisht, S, Bharath, S.R, Murthy, M.R.N.
Deposit date:2013-02-27
Release date:2014-03-26
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.48 Å)
Cite:Conformational transitions, ligand specificity and catalysis in N-acetylornithine aminotransferase: Implications on drug designing and rational enzyme engineering in omega aminotransferases.
To be Published
6J9X
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BU of 6j9x by Molmil
Crystal structure of Trypanosoma brucei gambiense glycerol kinase phosphorylated at Thr12(pyrophosphatase reaction)
Descriptor: GLYCEROL, Glycerol kinase
Authors:Balogun, E.O, Chishima, T, Ichinose, M, Inaoka, D.K, Kido, Y, Ibrahim, B, Bringaud, F, de Koning, H, McKerrow, J.H, Watanabe, Y, Nozaki, T, Michels, P.A.M, Harada, S, Kita, K, Shiba, T.
Deposit date:2019-01-24
Release date:2020-01-29
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Glycerol Kinase of African Human Trypanosomes Possesses a Pyrophosphatase Activity.
To Be Published
4JEX
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BU of 4jex by Molmil
Y21K mutant of N-acetylornithine aminotransferase complexed with L-canaline
Descriptor: (2S)-2-azanyl-4-[(E)-[2-methyl-3-oxidanyl-5-(phosphonooxymethyl)pyridin-4-yl]methylideneamino]oxy-butanoic acid, 1,2-ETHANEDIOL, ACETATE ION, ...
Authors:Bisht, S, Bharath, S.R, Murthy, M.R.N.
Deposit date:2013-02-27
Release date:2014-03-26
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.43 Å)
Cite:Conformational transitions, ligand specificity and catalysis in N-acetylornithine aminotransferase: Implications on drug designing and rational enzyme engineering in omega aminotransferases
To be Published
4JEZ
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BU of 4jez by Molmil
N79R mutant of N-acetylornithine aminotransferase complexed with L-canaline
Descriptor: (2S)-2-azanyl-4-[(E)-[2-methyl-3-oxidanyl-5-(phosphonooxymethyl)pyridin-4-yl]methylideneamino]oxy-butanoic acid, 1,2-ETHANEDIOL, ACETATE ION, ...
Authors:Bisht, S, Bharath, S.R, Murthy, M.R.N.
Deposit date:2013-02-27
Release date:2014-03-26
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Conformational transitions, ligand specificity and catalysis in N-acetylornithine aminotransferase: Implications on drug designing and rational enzyme engineering in omega aminotransferases
To be Published
4JF1
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BU of 4jf1 by Molmil
R144Q mutant of N-acetylornithine aminotransferase
Descriptor: 1,2-ETHANEDIOL, ACETATE ION, Acetylornithine/succinyldiaminopimelate aminotransferase, ...
Authors:Bisht, S, Bharath, S.R, Murthy, M.R.N.
Deposit date:2013-02-27
Release date:2014-03-26
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.28 Å)
Cite:Conformational transitions, ligand specificity and catalysis in N-acetylornithine aminotransferase: Implications on drug designing and rational enzyme engineering in omega aminotransferases
To be Published
4JF0
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BU of 4jf0 by Molmil
N79R mutant of N-acetylornithine aminotransferase
Descriptor: 1,2-ETHANEDIOL, ACETATE ION, Acetylornithine/succinyldiaminopimelate aminotransferase, ...
Authors:Bisht, S, Bharath, S.R, Murthy, M.R.N.
Deposit date:2013-02-27
Release date:2014-03-26
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Conformational transitions, ligand specificity and catalysis in N-acetylornithine aminotransferase: Implications on drug designing and rational enzyme engineering in omega aminotransferases
To be Published

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PDB entries from 2024-10-09

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