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PDB: 2350 results

6AIQ
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BU of 6aiq by Molmil
High resolution structure of recombinant high-potential iron-sulfur protein
Descriptor: GLYCEROL, High-potential iron-sulfur protein, IRON/SULFUR CLUSTER, ...
Authors:Hanazono, Y, Takeda, K, Miki, K.
Deposit date:2018-08-24
Release date:2019-08-21
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (0.85 Å)
Cite:Characterization of perdeuterated high-potential iron-sulfur protein with high-resolution X-ray crystallography.
Proteins, 88, 2020
1Z34
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BU of 1z34 by Molmil
Crystal structure of Trichomonas vaginalis purine nucleoside phosphorylase complexed with 2-fluoro-2'-deoxyadenosine
Descriptor: 5-(6-AMINO-2-FLUORO-PURIN-9-YL)-2-HYDROXYMETHYL-TETRAHYDRO-FURAN-3-OL, purine nucleoside phosphorylase
Authors:Zhang, Y, Wang, W.H, Wu, S.W, Wang, C.C, Ealick, S.E.
Deposit date:2005-03-10
Release date:2005-03-29
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Identification of a subversive substrate of Trichomonas vaginalis purine nucleoside phosphorylase and the crystal structure of the enzyme-substrate complex.
J.Biol.Chem., 280, 2005
5UQ8
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BU of 5uq8 by Molmil
70S ribosome complex with dnaX mRNA stem-loop and E-site tRNA ("out" conformation)
Descriptor: 16S rRNA, 23S rRNA, 30S ribosomal protein S10, ...
Authors:Zhang, Y, Hong, S, Skiniotis, G, Dunham, C.M.
Deposit date:2017-02-07
Release date:2018-03-07
Last modified:2018-03-21
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Alternative Mode of E-Site tRNA Binding in the Presence of a Downstream mRNA Stem Loop at the Entrance Channel.
Structure, 26, 2018
7C8G
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BU of 7c8g by Molmil
Structure of alginate lyase AlyC3
Descriptor: Alginate lyase AlyC3, GLYCEROL, SUCCINIC ACID
Authors:Zhang, Y.Z, Xu, F, Chen, X.L, Wang, P.
Deposit date:2020-05-30
Release date:2020-10-07
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural and molecular basis for the substrate positioning mechanism of a new PL7 subfamily alginate lyase from the arctic.
J.Biol.Chem., 295, 2020
7C8F
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BU of 7c8f by Molmil
Structure of alginate lyase AlyC3 in complex with dimannuronate(2M)
Descriptor: H127A/Y244A mutant of alginate lyase AlyC3 in complex with dimannuronate, MALONATE ION, beta-D-mannopyranuronic acid-(1-4)-beta-D-mannopyranuronic acid
Authors:Zhang, Y.Z, Xu, F, Chen, X.L, Wang, P.
Deposit date:2020-05-30
Release date:2020-10-07
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.461 Å)
Cite:Structural and molecular basis for the substrate positioning mechanism of a new PL7 subfamily alginate lyase from the arctic.
J.Biol.Chem., 295, 2020
5XZD
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BU of 5xzd by Molmil
Structure of acryloyl-CoA hydratase AcuH from Roseovarius nubinhibens ISM
Descriptor: ACETIC ACID, Enoyl-CoA hydratase
Authors:Zhang, Y.Z, Wang, P, Cao, H.Y.
Deposit date:2017-07-12
Release date:2018-07-18
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Molecular Insight into the Acryloyl-CoA Hydration by AcuH for Acrylate Detoxification in Dimethylsulfoniopropionate-Catabolizing Bacteria
Front Microbiol, 8, 2017
1Z37
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BU of 1z37 by Molmil
Crystal structure of Trichomonas vaginalis purine nucleoside phosphorylase complexed with adenosine
Descriptor: ADENOSINE, purine nucleoside phosphorylase
Authors:Zhang, Y, Wang, W.H, Wu, S.W, Wang, C.C, Ealick, S.E.
Deposit date:2005-03-10
Release date:2005-03-29
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Identification of a subversive substrate of Trichomonas vaginalis purine nucleoside phosphorylase and the crystal structure of the enzyme-substrate complex.
J.Biol.Chem., 280, 2005
1Z36
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BU of 1z36 by Molmil
Crystal structure of Trichomonas vaginalis purine nucleoside phosphorylase complexed with formycin A
Descriptor: (1S)-1-(7-amino-1H-pyrazolo[4,3-d]pyrimidin-3-yl)-1,4-anhydro-D-ribitol, purine nucleoside phosphorylase
Authors:Zhang, Y, Wang, W.H, Wu, S.W, Wang, C.C, Ealick, S.E.
Deposit date:2005-03-10
Release date:2005-03-29
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Identification of a subversive substrate of Trichomonas vaginalis purine nucleoside phosphorylase and the crystal structure of the enzyme-substrate complex.
J.Biol.Chem., 280, 2005
3WOA
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BU of 3woa by Molmil
Crystal structure of lambda repressor (1-45) fused with maltose-binding protein
Descriptor: Repressor protein CI, Maltose-binding periplasmic protein, alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose
Authors:Hanazono, Y, Takeda, K, Miki, K.
Deposit date:2013-12-25
Release date:2015-04-29
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2 Å)
Cite:Co-translational folding of alpha-helical proteins: structural studies of intermediate-length variants of the lambda repressor.
FEBS Open Bio, 8, 2018
4I83
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BU of 4i83 by Molmil
Crystal Structure of (3R)-Hydroxymyristoyl-ACP Dehydratase from Neisseria meningitidis FAM18
Descriptor: 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ
Authors:Khandokar, Y.B, Forwood, J.K.
Deposit date:2012-12-02
Release date:2013-01-16
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal Structure of (3R)-Hydroxymyristoyl-ACP Dehydratase from Neisseria meningitidis FAM18
To be published
3JC9
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BU of 3jc9 by Molmil
Architectural model of the type IVa pilus machine in a non-piliated state
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, PilA, ...
Authors:Chang, Y.-W, Rettberg, L.A, Jensen, G.J.
Deposit date:2015-11-24
Release date:2016-03-16
Last modified:2018-07-18
Method:ELECTRON MICROSCOPY
Cite:Architecture of the type IVa pilus machine.
Science, 351, 2016
6E86
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BU of 6e86 by Molmil
Solution structure of ZZZ3 ZZ domain in complex with histone H3K4ac peptide
Descriptor: H3K4ac, ZINC ION, ZZ-type zinc finger-containing protein 3
Authors:Zhang, Y, Kutateladze, T.G.
Deposit date:2018-07-27
Release date:2018-09-19
Last modified:2024-10-16
Method:SOLUTION NMR
Cite:The ZZ-type zinc finger of ZZZ3 modulates the ATAC complex-mediated histone acetylation and gene activation.
Nat Commun, 9, 2018
3JC8
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BU of 3jc8 by Molmil
Architectural model of the type IVa pilus machine in a piliated state
Descriptor: LysM domain protein, PilA, PilN, ...
Authors:Chang, Y.-W, Rettberg, L.A, Jensen, G.J.
Deposit date:2015-11-24
Release date:2016-03-16
Last modified:2018-07-18
Method:ELECTRON MICROSCOPY
Cite:Architecture of the type IVa pilus machine.
Science, 351, 2016
2A9Y
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BU of 2a9y by Molmil
Crystal structure of T. gondii adenosine kinase complexed with N6-dimethyladenosine
Descriptor: 6N-DIMETHYLADENOSINE, ACETATE ION, CHLORIDE ION, ...
Authors:Zhang, Y, el Kouni, M.H, Ealick, S.E.
Deposit date:2005-07-12
Release date:2006-07-11
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Substrate analogs induce an intermediate conformational change in Toxoplasma gondii adenosine kinase
Acta Crystallogr.,Sect.D, 63, 2007
7X44
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BU of 7x44 by Molmil
Crystal structure of chlorotoxin mutant - Q11N
Descriptor: Chlorotoxin
Authors:Chang, Y.T, Chuang, W.J.
Deposit date:2022-03-01
Release date:2023-03-08
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.04 Å)
Cite:Expression in Pichia pastoris and characterization of chlorotoxin, an anti-glioma migration agent
To Be Published
7X43
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BU of 7x43 by Molmil
Crystal structure of chlorotoxin mutant - M1R
Descriptor: Chlorotoxin
Authors:Chang, Y.T, Chuang, W.J.
Deposit date:2022-03-01
Release date:2023-03-08
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.04 Å)
Cite:Expression in Pichia pastoris and characterization of chlorotoxin, an anti-glioma migration agent
To Be Published
2AA0
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BU of 2aa0 by Molmil
Crystal structure of T. gondii adenosine kinase complexed with 6-methylmercaptopurine riboside
Descriptor: 2-HYDROXYMETHYL-5-(6-METHYLSULFANYL-PURIN-9-YL)-TETRAHYDRO-FURAN-3,4-DIOL, ACETATE ION, CHLORIDE ION, ...
Authors:Zhang, Y, el Kouni, M.H, Ealick, S.E.
Deposit date:2005-07-13
Release date:2006-07-25
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Substrate analogs induce an intermediate conformational change in Toxoplasma gondii adenosine kinase
Acta Crystallogr.,Sect.D, 63, 2007
7X4D
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BU of 7x4d by Molmil
Crystal structure of chlorotoxin mutant - Y29K
Descriptor: Chlorotoxin
Authors:Chang, Y.T, Chuang, W.J.
Deposit date:2022-03-02
Release date:2023-03-08
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Expression in Pichia pastoris and characterization of chlorotoxin, an anti-glioma migration agent
To Be Published
7X41
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BU of 7x41 by Molmil
Crystal structure of chlorotoxin, a glioma specific scorpion toxin
Descriptor: Chlorotoxin
Authors:Chang, Y.T, Chuang, W.J.
Deposit date:2022-03-01
Release date:2023-03-08
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.15 Å)
Cite:Expression in Pichia pastoris and characterization of chlorotoxin, an anti-glioma migration agent
To Be Published
2AB8
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BU of 2ab8 by Molmil
Crystal structure of T. gondii adenosine kinase complexed with 6-methylmercaptopurine riboside and AMP-PCP
Descriptor: 2-HYDROXYMETHYL-5-(6-METHYLSULFANYL-PURIN-9-YL)-TETRAHYDRO-FURAN-3,4-DIOL, CHLORIDE ION, PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER, ...
Authors:Zhang, Y, el Kouni, M.H, Ealick, S.E.
Deposit date:2005-07-14
Release date:2006-07-25
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Substrate analogs induce an intermediate conformational change in Toxoplasma gondii adenosine kinase
Acta Crystallogr.,Sect.D, 63, 2007
6BMH
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BU of 6bmh by Molmil
Crystal structure of MHC-I like protein
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Antigen-presenting glycoprotein CD1d2, ...
Authors:Khandokar, Y.B, Le Nours, J, Rossjohn, J.
Deposit date:2017-11-14
Release date:2018-01-31
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.298 Å)
Cite:Differing roles of CD1d2 and CD1d1 proteins in type I natural killer T cell development and function.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
6BMK
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BU of 6bmk by Molmil
Crystal structure of MHC-I like protein
Descriptor: (2R)-1-(decanoyloxy)-3-(phosphonooxy)propan-2-yl octadecanoate, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Khandokar, Y.B, Le Nours, J, Rossjohn, J.
Deposit date:2017-11-15
Release date:2018-01-31
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.43 Å)
Cite:Differing roles of CD1d2 and CD1d1 proteins in type I natural killer T cell development and function.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
2XZU
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BU of 2xzu by Molmil
CRYSTAL STRUCTURE OF A COMPLEX BETWEEN THE WILD-TYPE LACTOCOCCUS LACTIS FPG (MUTM) AND AN OXIDIZED PYRIMIDINE CONTAINING DNA AT 310K
Descriptor: 5'-D(*CP*TP*CP*TP*TP*TP*VETP*TP*TP*TP*CP*TP*CP*G)-3', 5'-D(GP*CP*GP*AP*GP*AP*AP*AP*CP*AP*AP*AP*G*A)-3', FORMAMIDOPYRIMIDINE-DNA GLYCOSYLASE, ...
Authors:Lebihan, Y.V, Izquierdo, M.A, Coste, F, Culard, F, Gehrke, T.H, Essalhi, K, Aller, P, Carrel, T, Castaing, B.
Deposit date:2010-11-29
Release date:2011-10-05
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.82 Å)
Cite:5-Hydroxy-5-Methylhydantoin DNA Lesion, a Molecular Trap for DNA Glycosylases
Nucleic Acids Res., 39, 2011
5YWN
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BU of 5ywn by Molmil
SsCR_L211H-NADP+
Descriptor: NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, Protein induced by osmotic stress
Authors:Shang, Y.P, Chen, Q, Yu, H.L, Xu, J.H.
Deposit date:2017-11-29
Release date:2019-03-06
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.039 Å)
Cite:Attenuated substrate inhibition of a haloketone reductase via structure-guided loop engineering.
J.Biotechnol., 308, 2020
5YW4
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Structure-Guided Engineering of Reductase: Efficient Attenuating Substrate Inhibition in Asymmetric Catalysis
Descriptor: NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, Protein induced by osmotic stress
Authors:Shang, Y.P, Chen, Q, Li, A.T, Yu, H.L, Xu, J.H.
Deposit date:2017-11-28
Release date:2019-03-06
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.047 Å)
Cite:Attenuated substrate inhibition of a haloketone reductase via structure-guided loop engineering.
J.Biotechnol., 308, 2020

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