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PDB: 1321 results

5TEB
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BU of 5teb by Molmil
Crystal Structure of the TIR domain from the Arabidopsis Thaliana disease resistance protein RPP1
Descriptor: Recognition of Peronospora parasitica 1
Authors:Bentham, A.R, Zhang, X, Croll, T, Williams, S, Kobe, B.
Deposit date:2016-09-20
Release date:2017-02-01
Last modified:2020-01-01
Method:X-RAY DIFFRACTION (2.796 Å)
Cite:Multiple functional self-association interfaces in plant TIR domains.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
7V27
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BU of 7v27 by Molmil
RBD/XG005 local refinement
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Spike protein S1, XG005-VH, ...
Authors:Zhan, W.Q, Zhang, X, Sun, L, Chen, Z.G.
Deposit date:2021-08-07
Release date:2022-08-10
Method:ELECTRON MICROSCOPY (4.18 Å)
Cite:RBD/XG005 local refinement
To Be Published
6MS7
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BU of 6ms7 by Molmil
Peroxisome proliferator-activated receptor gamma ligand binding domain in complex with a novel selective PPAR-gamma modulator VSP-77
Descriptor: PGC1 LXXLL motif, Peroxisome proliferator-activated receptor gamma, {[(1S)-1-(4-chlorophenyl)octyl]oxy}acetic acid
Authors:Yi, W, Jiang, H, Zhou, X.E, Shi, J, Zhao, G, Zhang, X, Sun, Y, Suino-Powell, K, Li, J, Li, J, Melcher, K, Xu, H.E.
Deposit date:2018-10-16
Release date:2019-10-23
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.43 Å)
Cite:Identification and structural insight of an effective PPAR gamma modulator with improved therapeutic index for anti-diabetic drug discovery.
Chem Sci, 11, 2020
8KC7
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BU of 8kc7 by Molmil
Rpd3S histone deacetylase complex
Descriptor: Chromatin modification-related protein EAF3, Histone deacetylase RPD3, Transcriptional regulatory protein RCO1, ...
Authors:Dong, S, Li, H, Wang, M, Rasheed, N, Zou, B, Gao, X, Guan, J, Li, W, Zhang, J, Wang, C, Zhou, N, Shi, X, Li, M, Zhou, M, Huang, J, Li, H, Zhang, Y, Wong, K.H, Zhang, X, Chao, W.C.H, He, J.
Deposit date:2023-08-06
Release date:2023-09-13
Last modified:2023-10-18
Method:ELECTRON MICROSCOPY (3.46 Å)
Cite:Structural basis of nucleosome deacetylation and DNA linker tightening by Rpd3S histone deacetylase complex.
Cell Res., 33, 2023
3MCB
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BU of 3mcb by Molmil
Crystal structure of NAC domains of human nascent polypeptide-associated complex (NAC)
Descriptor: IODIDE ION, Nascent polypeptide-associated complex subunit alpha, Transcription factor BTF3
Authors:Wang, L.F, Zhang, W.C, Wang, L, Zhang, X.J.C, Li, X.M, Rao, Z.
Deposit date:2010-03-29
Release date:2010-07-14
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structures of NAC domains of human nascent polypeptide-associated complex (NAC) and its alphaNAC subunit
Protein Cell, 1, 2010
1MVH
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BU of 1mvh by Molmil
structure of the SET domain histone lysine methyltransferase Clr4
Descriptor: Cryptic loci regulator 4, NICKEL (II) ION, SULFATE ION, ...
Authors:Min, J.R, Zhang, X, Cheng, X.D, Grewal, S.I.S, Xu, R.-M.
Deposit date:2002-09-25
Release date:2002-10-30
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structure of the SET domain histone lysine methyltransferase Clr4.
Nat.Struct.Biol., 9, 2002
8HIF
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BU of 8hif by Molmil
One asymmetric unit of Singapore grouper iridovirus capsid
Descriptor: Major capsid protein, Penton protein (VP14), VP137, ...
Authors:Zhao, Z.N, Liu, C.C, Zhu, D.J, Qi, J.X, Zhang, X.Z, Gao, G.F.
Deposit date:2022-11-20
Release date:2023-04-19
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Near-atomic architecture of Singapore grouper iridovirus and implications for giant virus assembly.
Nat Commun, 14, 2023
2QVJ
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BU of 2qvj by Molmil
Crystal structure of a vesicular stomatitis virus nucleocapsid protein Ser290Trp mutant
Descriptor: Nucleocapsid protein
Authors:Luo, M, Green, T.J, Zhang, X, Tsao, J, Qiu, S.
Deposit date:2007-08-08
Release date:2008-01-08
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Role of intermolecular interactions of vesicular stomatitis virus nucleoprotein in RNA encapsidation.
J.Virol., 82, 2008
3O05
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BU of 3o05 by Molmil
Crystal Structure of Yeast Pyridoxal 5-Phosphate Synthase Snz1 Complxed with Substrate PLP
Descriptor: PYRIDOXAL-5'-PHOSPHATE, Pyridoxine biosynthesis protein SNZ1
Authors:Teng, Y.B, Zhang, X, He, Y.X, Hu, H.X, Zhou, C.Z.
Deposit date:2010-07-19
Release date:2010-11-24
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural insights into the catalytic mechanism of the yeast pyridoxal 5-phosphate synthase Snz1
Biochem.J., 432, 2010
3O06
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BU of 3o06 by Molmil
Crystal Structure of yeast pyridoxal 5-phosphate synthase Snz1
Descriptor: Pyridoxine biosynthesis protein SNZ1
Authors:Teng, Y.B, Zhang, X, Zhou, C.Z, Hu, H.X.
Deposit date:2010-07-19
Release date:2010-11-24
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:Structural insights into the catalytic mechanism of the yeast pyridoxal 5-phosphate synthase Snz1
Biochem.J., 432, 2010
6M32
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BU of 6m32 by Molmil
Cryo-EM structure of FMO-RC complex from green sulfur bacteria
Descriptor: 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE, 2-[(1E,3E,5E,7E,9E,11E,13E,15E,17E,19E)-3,7,12,16,20,24-hexamethylpentacosa-1,3,5,7,9,11,13,15,17,19,23-undecaenyl]-1,3,4-trimethyl-benzene, ...
Authors:Chen, J.H, Zhang, X.
Deposit date:2020-03-02
Release date:2020-11-25
Last modified:2020-12-09
Method:ELECTRON MICROSCOPY (2.7 Å)
Cite:Architecture of the photosynthetic complex from a green sulfur bacterium.
Science, 370, 2020
1NGN
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BU of 1ngn by Molmil
Mismatch repair in methylated DNA. Structure of the mismatch-specific thymine glycosylase domain of methyl-CpG-binding protein MBD4
Descriptor: methyl-CpG binding protein MBD4
Authors:Wu, P, Qiu, C, Sohail, A, Zhang, X, Bhagwat, A.S, Cheng, X.
Deposit date:2002-12-17
Release date:2003-03-18
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Mismatch repair in methylated DNA. Structure and activity of the mismatch-specific thymine glycosylase domain of methyl-CpG-binding protein MBD4
J.Biol.Chem., 278, 2003
8IAB
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BU of 8iab by Molmil
The Arabidopsis CLCa transporter bound with chloride, ATP and PIP2
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, CHLORIDE ION, Chloride channel protein CLC-a, ...
Authors:Yang, Z, Zhang, X, Zhang, P.
Deposit date:2023-02-08
Release date:2023-08-02
Last modified:2023-08-30
Method:ELECTRON MICROSCOPY (2.96 Å)
Cite:Molecular mechanism underlying regulation of Arabidopsis CLCa transporter by nucleotides and phospholipids.
Nat Commun, 14, 2023
8IAD
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BU of 8iad by Molmil
The Arabidopsis CLCa transporter bound with nitrate, ATP and PIP2
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Chloride channel protein CLC-a, MAGNESIUM ION, ...
Authors:Yang, Z, Zhang, X, Zhang, P.
Deposit date:2023-02-08
Release date:2023-08-02
Last modified:2023-08-30
Method:ELECTRON MICROSCOPY (3.16 Å)
Cite:Molecular mechanism underlying regulation of Arabidopsis CLCa transporter by nucleotides and phospholipids.
Nat Commun, 14, 2023
3O07
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BU of 3o07 by Molmil
Crystal structure of yeast pyridoxal 5-phosphate synthase Snz1 complexed with substrate G3P
Descriptor: GLYCERALDEHYDE-3-PHOSPHATE, Pyridoxine biosynthesis protein SNZ1
Authors:Teng, Y.B, Zhang, X, Hu, H.X, Zhou, C.Z.
Deposit date:2010-07-19
Release date:2010-11-24
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural insights into the catalytic mechanism of the yeast pyridoxal 5-phosphate synthase Snz1
Biochem.J., 432, 2010
3VSF
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BU of 3vsf by Molmil
Crystal structure of 1,3Gal43A, an exo-beta-1,3-Galactanase from Clostridium thermocellum
Descriptor: GLYCEROL, Ricin B lectin
Authors:Jiang, D, Fan, J, Wang, X, Zhao, Y, Huang, B, Zhang, X.C.
Deposit date:2012-04-25
Release date:2012-12-05
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.757 Å)
Cite:Crystal structure of 1,3Gal43A, an exo-beta-1,3-galactanase from Clostridium thermocellum
J.Struct.Biol., 180, 2012
3VSZ
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BU of 3vsz by Molmil
Crystal structure of Ct1,3Gal43A in complex with galactan
Descriptor: GLYCEROL, Ricin B lectin, beta-D-galactopyranose-(1-3)-beta-D-galactopyranose, ...
Authors:Jiang, D, Fan, J, Wang, X, Zhao, Y, Huang, B, Zhang, X.C.
Deposit date:2012-05-18
Release date:2012-12-05
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.893 Å)
Cite:Crystal structure of 1,3Gal43A, an exo-beta-1,3-galactanase from Clostridium thermocellum
J.Struct.Biol., 180, 2012
6LS3
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BU of 6ls3 by Molmil
cubic-shaped crystal of TmFtn mutant-T4FY stimulated by Mg
Descriptor: FE (III) ION, Ferritin, MAGNESIUM ION
Authors:Zhao, G, Zhang, X.
Deposit date:2020-01-16
Release date:2021-01-20
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.815 Å)
Cite:cubic-shaped crystal of TmFtn mutant-T4FY stimulated by Mg
To Be Published
6M3W
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BU of 6m3w by Molmil
Post-fusion structure of SARS-CoV spike glycoprotein
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein
Authors:Fan, X, Cao, D, Zhang, X.
Deposit date:2020-03-04
Release date:2020-06-03
Last modified:2020-09-02
Method:ELECTRON MICROSCOPY (3.9 Å)
Cite:Cryo-EM analysis of the post-fusion structure of the SARS-CoV spike glycoprotein.
Nat Commun, 11, 2020
3M95
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BU of 3m95 by Molmil
Crystal structure of autophagy-related protein Atg8 from the silkworm Bombyx mori
Descriptor: Autophagy related protein Atg8
Authors:Teng, Y.-B, Hu, C, Zhang, X, Jiang, Y.L, Hu, H.-X, Zhou, C.Z.
Deposit date:2010-03-20
Release date:2010-07-21
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structure of autophagy-related protein Atg8 from the silkworm Bombyx mori
Acta Crystallogr.,Sect.F, 66, 2010
2VII
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BU of 2vii by Molmil
PspF1-275-Mg-AMP
Descriptor: ADENOSINE MONOPHOSPHATE, MAGNESIUM ION, PSP OPERON TRANSCRIPTIONAL ACTIVATOR
Authors:Joly, N, Rappas, M, Buck, M, Zhang, X.
Deposit date:2007-12-04
Release date:2008-01-22
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.85 Å)
Cite:Trapping of a Transcription Complex Using a New Nucleotide Analogue: AMP Aluminium Fluoride
J.Mol.Biol., 375, 2008
3WY7
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BU of 3wy7 by Molmil
Crystal structure of Mycobacterium smegmatis 7-Keto-8-aminopelargonic acid (KAPA) synthase BioF
Descriptor: 8-amino-7-oxononanoate synthase
Authors:Fan, S.H, Li, D.F, Wang, D.C, Chen, G.J, Zhang, X.E, Bi, L.J.
Deposit date:2014-08-20
Release date:2014-12-17
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structure and function of Mycobacterium smegmatis 7-keto-8-aminopelargonic acid (KAPA) synthase
Int.J.Biochem.Cell Biol., 58C, 2014
1RJX
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BU of 1rjx by Molmil
Human PLASMINOGEN CATALYTIC DOMAIN, K698M MUTANT
Descriptor: Plasminogen, SULFATE ION
Authors:Terzyan, S, Wakeham, N, Zhai, P, Rodgers, K, Zhang, X.C.
Deposit date:2003-11-20
Release date:2003-12-02
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Characterization of Lys-698 to met substitution in human plasminogen catalytic domain
Proteins, 56, 2004
3CTM
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BU of 3ctm by Molmil
Crystal Structure of a Carbonyl Reductase from Candida Parapsilosis with anti-Prelog Stereo-specificity
Descriptor: Carbonyl Reductase
Authors:Zhang, R, Zhu, G, Li, X, Xu, Y, Zhang, X.C, Rao, Z.
Deposit date:2008-04-14
Release date:2008-05-27
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.69 Å)
Cite:Crystal structure of a carbonyl reductase from Candida parapsilosis with anti-Prelog stereospecificity.
Protein Sci., 17, 2008
8JEP
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BU of 8jep by Molmil
Crystal structure of Ociperlimab
Descriptor: antibody heavy chain, antibody light chain
Authors:Sun, J, Zhang, X.X, Song, J.
Deposit date:2023-05-16
Release date:2024-02-28
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural insights into the unique pH-responsive characteristics of the anti-TIGIT therapeutic antibody Ociperlimab.
Structure, 32, 2024

224004

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