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PDB: 1182 results

8E8E
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BU of 8e8e by Molmil
Human DNA polymerase eta-DNA-rU-ended primer ternary mismatch complex:reaction with 10 mM Mn2+ for 90s
Descriptor: 2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE, DIPHOSPHATE, DNA (5'-D(*CP*AP*TP*TP*AP*TP*GP*AP*CP*GP*CP*T)-3'), ...
Authors:Chang, C, Gao, Y.
Deposit date:2022-08-25
Release date:2023-02-01
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.05 Å)
Cite:Primer terminal ribonucleotide alters the active site dynamics of DNA polymerase eta and reduces DNA synthesis fidelity.
J.Biol.Chem., 299, 2023
8BMQ
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BU of 8bmq by Molmil
Cryo-EM structure of the folate-specific ECF transporter complex in MSP2N2 lipid nanodiscs bound to AMP-PNP
Descriptor: Energy-coupling factor transporter ATP-binding protein EcfA1, Energy-coupling factor transporter ATP-binding protein EcfA2, Energy-coupling factor transporter transmembrane protein EcfT, ...
Authors:Thangaratnarajah, C, Rheinberger, J, Paulino, C, Slotboom, D.J.
Deposit date:2022-11-10
Release date:2023-08-02
Last modified:2024-07-24
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Expulsion mechanism of the substrate-translocating subunit in ECF transporters.
Nat Commun, 14, 2023
8BMR
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BU of 8bmr by Molmil
Cryo-EM structure of the wild-type solitary ECF module in MSP2N2 lipid nanodiscs in the ATPase open and nucleotide-free conformation
Descriptor: Energy-coupling factor transporter ATP-binding protein EcfA1, Energy-coupling factor transporter ATP-binding protein EcfA2, Energy-coupling factor transporter transmembrane protein EcfT
Authors:Thangaratnarajah, C, Rheinberger, J, Paulino, C, Slotboom, D.J.
Deposit date:2022-11-10
Release date:2023-08-02
Last modified:2024-07-24
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Expulsion mechanism of the substrate-translocating subunit in ECF transporters.
Nat Commun, 14, 2023
8BMS
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BU of 8bms by Molmil
Cryo-EM structure of the mutant solitary ECF module 2EQ in MSP2N2 lipid nanodiscs in the ATPase closed and ATP-bound conformation
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, Energy-coupling factor transporter ATP-binding protein EcfA1, Energy-coupling factor transporter ATP-binding protein EcfA2, ...
Authors:Thangaratnarajah, C, Rheinberger, J, Paulino, C, Slotboom, D.J.
Deposit date:2022-11-10
Release date:2023-08-02
Last modified:2024-07-24
Method:ELECTRON MICROSCOPY (2.6 Å)
Cite:Expulsion mechanism of the substrate-translocating subunit in ECF transporters.
Nat Commun, 14, 2023
8BMP
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BU of 8bmp by Molmil
Cryo-EM structure of the folate-specific ECF transporter complex in MSP2N2 lipid nanodiscs bound to ATP and ADP
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ADENOSINE-5'-TRIPHOSPHATE, Energy-coupling factor transporter ATP-binding protein EcfA1, ...
Authors:Thangaratnarajah, C, Rheinberger, J, Paulino, C, Slotboom, D.J.
Deposit date:2022-11-10
Release date:2023-08-02
Last modified:2024-07-24
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Expulsion mechanism of the substrate-translocating subunit in ECF transporters.
Nat Commun, 14, 2023
5GP1
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BU of 5gp1 by Molmil
Crystal structure of ZIKV NS5 Methyltransferase in complex with GTP and SAH
Descriptor: NICKEL (II) ION, P1-7-METHYLGUANOSINE-P3-ADENOSINE-5',5'-TRIPHOSPHATE, RNA-directed RNA polymerase NS5, ...
Authors:Zhang, C, Jin, T.
Deposit date:2016-07-30
Release date:2016-12-07
Last modified:2017-10-18
Method:X-RAY DIFFRACTION (2.444 Å)
Cite:Structure of the NS5 methyltransferase from Zika virus and implications in inhibitor design
Biochem. Biophys. Res. Commun., 492, 2017
5GOZ
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BU of 5goz by Molmil
Crystal structure of ZIKV NS5 Methyltransferase in complex with GTP and SAH
Descriptor: GUANOSINE-5'-TRIPHOSPHATE, PHOSPHATE ION, PYROPHOSPHATE 2-, ...
Authors:Zhang, C, Jin, T.
Deposit date:2016-07-30
Release date:2016-12-07
Last modified:2017-10-18
Method:X-RAY DIFFRACTION (2.049 Å)
Cite:Structure of the NS5 methyltransferase from Zika virus and implications in inhibitor design
Biochem. Biophys. Res. Commun., 492, 2017
3CWF
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BU of 3cwf by Molmil
Crystal structure of PAS domain of two-component sensor histidine kinase
Descriptor: 1,2-ETHANEDIOL, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, Alkaline phosphatase synthesis sensor protein phoR
Authors:Chang, C, Tesar, C, Gu, M, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2008-04-21
Release date:2008-05-06
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Extracytoplasmic PAS-like domains are common in signal transduction proteins.
J.Bacteriol., 192, 2010
6WIP
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BU of 6wip by Molmil
Class A beta-lactamase from Micromonospora aurantiaca ATCC 27029
Descriptor: ACETATE ION, Beta-lactamase, SULFATE ION
Authors:Chang, C, Tesar, C, Endres, M, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2020-04-10
Release date:2020-04-22
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:class A beta-lactamase from Micromonospora aurantiaca ATCC 27029
To Be Published
3F9U
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BU of 3f9u by Molmil
Crystal structure of C-terminal domain of putative exported cytochrome C biogenesis-related protein from Bacteroides fragilis
Descriptor: 1,2-ETHANEDIOL, NITRATE ION, Putative exported cytochrome C biogenesis-related protein
Authors:Chang, C, Tesar, C, Cobb, G, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2008-11-14
Release date:2008-12-02
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of C-terminal domain of putative exported cytochrome C biogenesis-related protein from Bacteroides fragilis
To be Published
3DNP
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BU of 3dnp by Molmil
Crystal structure of Stress response protein yhaX from Bacillus subtilis
Descriptor: 1,2-ETHANEDIOL, MAGNESIUM ION, Stress response protein yhaX
Authors:Chang, C, Tesar, C, Jedrzejczak, R, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2008-07-02
Release date:2008-07-29
Last modified:2017-10-25
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Crystal structure of Stress response protein yhaX from Bacillus subtilis
To be Published
3FZ5
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BU of 3fz5 by Molmil
Crystal structure of possible 2-hydroxychromene-2-carboxylate isomerase from Rhodobacter sphaeroides
Descriptor: 1,2-ETHANEDIOL, CALCIUM ION, GLUTATHIONE, ...
Authors:Chang, C, Hatzos, C, Freeman, L, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2009-01-23
Release date:2009-02-03
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structure of possible 2-hydroxychromene-2-carboxylate isomerase from Rhodobacter sphaeroides
To be Published
3GKX
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BU of 3gkx by Molmil
Crystal structure of putative ArsC family related protein from Bacteroides fragilis
Descriptor: Putative ArsC family related protein
Authors:Chang, C, Tesar, C, Freeman, L, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2009-03-11
Release date:2009-03-24
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of putative ArsC family related protein from Bacteroides fragilis
To be Published
2A67
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BU of 2a67 by Molmil
Crystal structure of Isochorismatase family protein
Descriptor: isochorismatase family protein
Authors:Chang, C, Hatzos, C, Collart, F, Moy, S, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2005-07-01
Release date:2005-08-16
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of Isochorismatase family protein
To be Published
3LL7
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BU of 3ll7 by Molmil
Crystal structure of putative methyltransferase PG_1098 from Porphyromonas gingivalis W83
Descriptor: 1,2-ETHANEDIOL, FORMIC ACID, Putative methyltransferase
Authors:Chang, C, Chhor, G, Buck, K, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2010-01-28
Release date:2010-02-16
Last modified:2017-11-01
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of putative methyltransferase PG_1098 from Porphyromonas gingivalis W83
To be Published
6XFS
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BU of 6xfs by Molmil
Class C beta-lactamase from Escherichia coli in complex with Tazobactam
Descriptor: 1,2-ETHANEDIOL, Beta-lactamase, DI(HYDROXYETHYL)ETHER, ...
Authors:Chang, C, Maltseva, N, Endres, M, Joachimiak, A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:2020-06-16
Release date:2020-07-15
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Class C beta-lactamase from Escherichia coli in complex with Tazobactam
To Be Published
8V7B
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BU of 8v7b by Molmil
Human DNA polymerase eta-DNA-dT primer araCTP insertion ternary complex at pH7.0 (K+ MES) with 1 Ca2+ ion
Descriptor: 4-amino-1-{5-O-[(S)-hydroxy{[(R)-hydroxy(phosphonooxy)phosphoryl]oxy}phosphoryl]-beta-D-arabinofuranosyl}pyrimidin-2(1H)-one, CALCIUM ION, DNA (5'-D(*AP*GP*CP*GP*TP*CP*AP*T*())-3'), ...
Authors:Chang, C, Gao, Y.
Deposit date:2023-12-04
Release date:2024-05-15
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Human DNA polymerase eta-DNA-dT primer araCTP insertion ternary complex at pH7.0 (K+ MES) with 1 Ca2+ ion
To Be Published
3LED
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BU of 3led by Molmil
Crystal structure of 3-oxoacyl-(acyl carrier protein) synthase III from Rhodopseudomonas palustris CGA009
Descriptor: 3-oxoacyl-acyl carrier protein synthase III, FORMIC ACID
Authors:Chang, C, Xu, X, Cui, H, Savchenko, A, Edwards, A, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2010-01-14
Release date:2010-01-26
Last modified:2017-11-01
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Crystal structure of 3-oxoacyl-(acyl carrier protein) synthase III from Rhodopseudomonas palustris CGA009
To be Published
3LHK
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BU of 3lhk by Molmil
Crystal structure of putative DNA binding protein from Methanocaldococcus jannaschii.
Descriptor: putative DNA binding protein MJ0014
Authors:Chang, C, Chhor, G, Cobb, G, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2010-01-22
Release date:2010-02-02
Last modified:2017-11-01
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Crystal structure of putative DNA binding protein from Methanocaldococcus jannaschii.
To be Published
8V7D
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BU of 8v7d by Molmil
Human DNA polymerase eta-DNA-dT primer rCTP insertion ternary complex at pH7.0 (K+ MES) with 1 Ca2+ ion
Descriptor: CALCIUM ION, CYTIDINE-5'-TRIPHOSPHATE, DNA (5'-D(*AP*GP*CP*GP*TP*CP*AP*T*())-3'), ...
Authors:Chang, C, Gao, Y.
Deposit date:2023-12-04
Release date:2024-05-15
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Human DNA polymerase eta-DNA-dT primer rCTP insertion ternary complex at pH7.0 (K+ MES) with 1 Ca2+ ion
To Be Published
8V7F
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BU of 8v7f by Molmil
Human DNA polymerase eta-DNA-araC-ended primer-dAMPNPP ternary complex with Mn2+
Descriptor: 2'-deoxy-5'-O-[(R)-hydroxy{[(R)-hydroxy(phosphonooxy)phosphoryl]amino}phosphoryl]adenosine, DNA (5'-D(*AP*GP*CP*GP*TP*CP*AP*T*())-3'), DNA (5'-D(*CP*AP*TP*GP*AP*TP*GP*AP*CP*GP*CP*T)-3'), ...
Authors:Chang, C, Gao, Y.
Deposit date:2023-12-04
Release date:2024-05-15
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Human DNA polymerase eta-DNA-araC-ended primer-dAMPNPP ternary complex with Mn2+
To Be Published
5BS6
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BU of 5bs6 by Molmil
Apo structure of transcriptional factor AraR from Bacteroides thetaiotaomicron VPI
Descriptor: 1,2-ETHANEDIOL, transcriptional regulator AraR
Authors:Chang, C, Tesar, C, Jedrzejczak, R, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2015-06-01
Release date:2015-06-17
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:A novel transcriptional regulator of L-arabinose utilization in human gut bacteria.
Nucleic Acids Res., 43, 2015
3LSO
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BU of 3lso by Molmil
Crystal structure of Putative membrane anchored protein from Corynebacterium diphtheriae
Descriptor: CHLORIDE ION, Putative membrane anchored protein
Authors:Chang, C, Sather, A, Clancy, S, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2010-02-12
Release date:2010-02-23
Last modified:2017-11-01
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:Crystal structure of Putative membrane anchored protein from Corynebacterium diphtheriae
To be Published
3LUP
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BU of 3lup by Molmil
Crystal structure of fatty acid binding DegV family protein SAG1342 from Streptococcus agalactiae
Descriptor: 9-OCTADECENOIC ACID, DegV family protein, GLYCEROL
Authors:Chang, C, Wu, R, Clancy, S, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2010-02-18
Release date:2010-03-02
Last modified:2019-07-17
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:Crystal structure of fatty acid binding DegV family protein SAG1342 from Streptococcus agalactiae
To be Published
5C4Y
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BU of 5c4y by Molmil
Crystal structure of putative TetR family transcription factor from Listeria monocytogenes
Descriptor: 1,2-ETHANEDIOL, Putative transcription regulator Lmo0852
Authors:Chang, C, Tesar, C, Clancy, S, Joachimiak, A, Midwest Center for Structural Genomics (MCSG)
Deposit date:2015-06-18
Release date:2015-07-08
Method:X-RAY DIFFRACTION (1.77 Å)
Cite:Crystal structure of putative TetR family transcription factor from Listeria monocytogenes
to be published

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PDB entries from 2024-10-09

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