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PDB: 396 results

3U4O
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Novel HCV NS5B polymerase Inhibitors: Discovery of Indole C2 Acyl sulfonamides
Descriptor: 1-[(2-aminopyridin-4-yl)methyl]-5-chloro-3-(2-oxo-1,2-dihydropyridin-3-yl)-1H-indole-2-carboxylic acid, PHOSPHATE ION, RNA-directed RNA polymerase
Authors:Anilkumar, G.N, Selyutin, O, Rosenblum, S.B, Zeng, Q, Jiang, Y, Chan, T.-Y, Pu, H, Wang, L, Bennett, F, Chen, K.X, Lesburg, C.A, Duca, J.S, Gavalas, S, Huang, Y, Pinto, P, Sannigrahi, M, Velazquez, F, Venkataraman, S, Vilbubhan, B, Agrawal, S, Ferrari, E, Jiang, C.-K, Huang, H.-C, Shih, N.-Y, Njoroge, F.G, Kozlowski, J.A.
Deposit date:2011-10-10
Release date:2011-12-07
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.77 Å)
Cite:II. Novel HCV NS5B polymerase inhibitors: Discovery of indole C2 acyl sulfonamides.
Bioorg.Med.Chem.Lett., 22, 2012
2KAF
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BU of 2kaf by Molmil
Solution structure of the SARS-unique domain-C from the nonstructural protein 3 (nsp3) of the severe acute respiratory syndrome coronavirus
Descriptor: Non-structural protein 3
Authors:Johnson, M.A, Mohanty, B, Pedrini, B, Serrano, P, Chatterjee, A, Herrmann, T, Joseph, J, Saikatendu, K, Wilson, I.A, Buchmeier, M.J, Kuhn, P, Wuthrich, K, Joint Center for Structural Genomics (JCSG)
Deposit date:2008-11-05
Release date:2008-11-25
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:SARS coronavirus unique domain: three-domain molecular architecture in solution and RNA binding.
J.Mol.Biol., 400, 2010
3KVS
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BU of 3kvs by Molmil
The high resolution structure of C-Phycocyanin from Galdieria Sulphuraria
Descriptor: BILIVERDINE IX ALPHA, C-phycocyanin alpha chain, C-phycocyanin beta chain
Authors:Fromme, R, Thangaraj, B, Vanselow, C, Fromme, P.
Deposit date:2009-11-30
Release date:2011-04-13
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:High resolution structure of C-Phycocyanin from Galdieria sulphuraria reveals new insights of the Phycobilisome
To be Published
2JNS
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BU of 2jns by Molmil
Solution structure of the Bromodomain-containing protein 4 ET domain
Descriptor: Bromodomain-containing protein 4
Authors:Lin, Y.J, Padmanabhan, B, Yokoyama, S, Guntert, P, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-02-01
Release date:2008-02-05
Last modified:2024-05-08
Method:SOLUTION NMR
Cite:Solution structure of the Bromodomain-containing protein 4 ET domain
To be Published
2LNH
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BU of 2lnh by Molmil
Enterohaemorrhagic E. coli (EHEC) exploits a tryptophan switch to hijack host F-actin assembly
Descriptor: Brain-specific angiogenesis inhibitor 1-associated protein 2-like protein 1, Neural Wiskott-Aldrich syndrome protein, Secreted effector protein EspF(U)
Authors:Aitio, O, Hellman, M, Skehan, B, Kesti, T, Leong, J.M, Saksela, K, Permi, P.
Deposit date:2011-12-28
Release date:2012-08-29
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Enterohaemorrhagic Escherichia coli exploits a tryptophan switch to hijack host f-actin assembly.
Structure, 20, 2012
2LLG
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BU of 2llg by Molmil
NMR structure of the protein NP_814968.1 from Enterococcus faecalis
Descriptor: Uncharacterized protein
Authors:Susac, L, Serrano, P, Geralt, M, Mohanty, B, Wuthrich, K, Joint Center for Structural Genomics (JCSG)
Deposit date:2011-11-08
Release date:2011-11-23
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:NMR structure of the protein NP_814968.1 from Enterococcus faecalis
To be Published
2L6O
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NMR structure of the protein YP_926445.1 from Shewanella Amazonensis
Descriptor: uncharacterized protein YP_926445.1
Authors:Serrano, P, Geralt, M, Mohanty, B, Horst, R, Wuthrich, K, Joint Center for Structural Genomics (JCSG)
Deposit date:2010-11-23
Release date:2010-12-15
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:NMR structure of the protein YP_926445.1 from Shewanella Amazonensis
To be Published
2YYR
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BU of 2yyr by Molmil
Structural analysis of PHD domain of Pygopus complexed with trimethylated histone H3 peptide
Descriptor: H3K4Me3 peptide, Pygopus homolog 1, ZINC ION
Authors:Nakamura, Y, Padmanabhan, B, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-05-01
Release date:2008-05-06
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural analysis of PHD domain of Pygopus complexed with trimethylated histone H3 peptide
To be Published
2YYY
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BU of 2yyy by Molmil
Crystal structure of Glyceraldehyde-3-phosphate dehydrogenase
Descriptor: Glyceraldehyde-3-phosphate dehydrogenase, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Malay, A.D, Bessho, Y, Padmanabhan, B, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-05-02
Release date:2007-11-06
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Structure of glyceraldehyde-3-phosphate dehydrogenase from the archaeal hyperthermophile Methanocaldococcus jannaschii.
Acta Crystallogr.,Sect.F, 65, 2009
2YYZ
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Crystal structure of Sugar ABC transporter, ATP-binding protein
Descriptor: DI(HYDROXYETHYL)ETHER, SULFATE ION, Sugar ABC transporter, ...
Authors:Ethayathullah, A.S, Bessho, Y, Padmanabhan, B, Singh, T.P, Kaur, P, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-05-02
Release date:2007-11-06
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.11 Å)
Cite:Crystal structure of Sugar ABC transporter, ATP-binding protein
To be Published
2YXY
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Crystarl structure of Hypothetical conserved protein, GK0453
Descriptor: Hypothetical conserved protein, GK0453
Authors:Nakamu, Y, Bessho, Y, Padmanabhan, B, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-04-27
Release date:2007-10-30
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structure of the hypothetical DUF1811-family protein GK0453 from Geobacillus kaustophilus HTA426
Acta Crystallogr.,Sect.F, 69, 2013
1U53
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BU of 1u53 by Molmil
Novel X-Ray Structure of Na-ASP-2, a PR-1 protein from the nematode parasite Necator americanus and a vaccine antigen for human hookworm infection
Descriptor: secreted protein ASP-2
Authors:Asojo, O.A, Goud, G, Dhar, K, Loukas, A, Zhan, B, Deumic, V, Liu, S, Borgstahl, G.E.O, Hotez, P.J.
Deposit date:2004-07-26
Release date:2005-02-01
Last modified:2017-10-11
Method:X-RAY DIFFRACTION (1.56 Å)
Cite:X-ray structure of Na-ASP-2, a pathogenesis-related-1 protein from the nematode parasite, Necator americanus, and a vaccine antigen for human hookworm infection.
J.Mol.Biol., 346, 2005
1JWT
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BU of 1jwt by Molmil
CRYSTAL STRUCTURE OF THROMBIN IN COMPLEX WITH A NOVEL BICYCLIC LACTAM INHIBITOR
Descriptor: 4-OXO-2-PHENYLMETHANESULFONYL-OCTAHYDRO-PYRROLO[1,2-A]PYRAZINE-6-CARBOXYLIC ACID [1-(N-HYDROXYCARBAMIMIDOYL)-PIPERIDIN-4-YLMETHYL]-AMIDE, Prothrombin
Authors:Levesque, S, St-Denis, Y, Bachand, B, Preville, P, Leblond, L, Winocour, P.D, Edmunds, J.J, Rubin, J.R, Siddiqui, M.A.
Deposit date:2001-09-05
Release date:2002-02-27
Last modified:2017-10-04
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Novel bicyclic lactam inhibitors of thrombin: potency and selectivity optimization through P1 residues.
Bioorg.Med.Chem.Lett., 11, 2001
2YXX
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BU of 2yxx by Molmil
Crystal structure analysis of Diaminopimelate decarboxylate (lysA)
Descriptor: Diaminopimelate decarboxylase, PYRIDOXAL-5'-PHOSPHATE
Authors:Nakamura, Y, Bessho, Y, Padmanabhan, B, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-04-27
Release date:2007-10-30
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structure analysis of Diaminopimelate decarboxylate (lysA)
To be Published
2YZ2
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BU of 2yz2 by Molmil
Crystal structure of the ABC transporter in the cobalt transport system
Descriptor: Putative ABC transporter ATP-binding protein TM_0222
Authors:Ethayathullah, A.S, Bessho, Y, Padmanabhan, B, Singh, T.P, Kaur, P, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-05-02
Release date:2007-11-06
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structure of the ABC transporter in the cobalt transport system
To be Published
4QYP
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BU of 4qyp by Molmil
The Crystal Structures of holo-wt human Cellular Retinol Binding protein II (hCRBPII) bound to Retinal
Descriptor: ACETATE ION, RETINAL, Retinol-binding protein 2
Authors:Nossoni, Z, Assar, Z, Yapici, I, Nosrati, M, Wang, W, Berbasova, T, Vasileiou, C, Borhan, B, Geiger, H.
Deposit date:2014-07-25
Release date:2014-12-10
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.62 Å)
Cite:Structures of holo wild-type human cellular retinol-binding protein II (hCRBPII) bound to retinol and retinal.
Acta Crystallogr.,Sect.D, 70, 2014
3ZPR
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BU of 3zpr by Molmil
Thermostabilised turkey beta1 adrenergic receptor with 4-methyl-2-(piperazin-1-yl) quinoline bound
Descriptor: 4-METHYL-2-(PIPERAZIN-1-YL) QUINOLINE, BETA-1 ADRENERGIC RECEPTOR, CHOLESTEROL HEMISUCCINATE, ...
Authors:Christopher, J.A, Congreve, M, Dore, A.S, Marshall, F.H, Myszka, D.G, Brown, J, Koglin, M, Tehan, B, Errey, J.C, Tate, C.G, Warne, T.
Deposit date:2013-03-01
Release date:2013-04-03
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Biophysical Fragment Screening of the Beta1-Adrenergic Receptor: Identification of High Affinity Aryl Piperazine Leads Using Structure-Based Drug Design.
J.Med.Chem., 56, 2013
4DG1
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BU of 4dg1 by Molmil
Crystal structure of HIV-1 reverse transcriptase (RT) with polymorphism mutation K172A and K173A
Descriptor: 1,2-ETHANEDIOL, GLYCEROL, MAGNESIUM ION, ...
Authors:Tu, X, Kirby, K.A, Marchand, B, Sarafianos, S.G.
Deposit date:2012-01-24
Release date:2012-06-20
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:HIV-1 Reverse Transcriptase (RT) Polymorphism 172K Suppresses the Effect of Clinically Relevant Drug Resistance Mutations to Both Nucleoside and Non-nucleoside RT Inhibitors.
J.Biol.Chem., 287, 2012
3AQA
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BU of 3aqa by Molmil
Crystal structure of the human BRD2 BD1 bromodomain in complex with a BRD2-interactive compound, BIC1
Descriptor: 1-[2-(1H-benzimidazol-2-ylsulfanyl)ethyl]-3-methyl-1,3-dihydro-2H-benzimidazole-2-thione, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Bromodomain-containing protein 2
Authors:Umehara, T, Nakamura, Y, Terada, T, Shirouzu, M, Padmanabhan, B, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2010-10-27
Release date:2011-05-18
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Real-Time Imaging of Histone H4K12-Specific Acetylation Determines the Modes of Action of Histone Deacetylase and Bromodomain Inhibitors
Chem.Biol., 18, 2011
7DSF
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BU of 7dsf by Molmil
The Crystal Structure of human SPR from Biortus.
Descriptor: ACETATE ION, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, Sepiapterin reductase, ...
Authors:Wang, F, Lv, Z, Cheng, W, Lin, D, Meng, Q, Zhang, B, Huang, Y.
Deposit date:2020-12-31
Release date:2021-01-13
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:The Crystal Structure of human SPR from Biortus.
To Be Published
2Z34
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Crystal structure of SpCia1/Asf1 complex with Hip1
Descriptor: Histone chaperone cia1, Protein hir1
Authors:Malay, A.D, Padmanabhan, B, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-05-31
Release date:2008-03-11
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structures of fission yeast histone chaperone Asf1 complexed with the Hip1 B-domain or the Cac2 C terminus
J.Biol.Chem., 283, 2008
2Z3F
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BU of 2z3f by Molmil
Crystal structure of spCia1/Asf1 complexed with Cac2 peptide
Descriptor: Histone chaperone cia1, SPAC26H5.03 protein
Authors:Malay, A.D, Padmanabhan, B, Yokoyama, S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)
Deposit date:2007-06-04
Release date:2008-03-11
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Crystal Structures of Fission Yeast Histone Chaperone Asf1 Complexed with the Hip1 B-domain or the Cac2 C Terminus
J.Biol.Chem., 283, 2008
7CAF
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Mycobacterium smegmatis LpqY-SugABC complex in the pre-translocation state
Descriptor: ABC sugar transporter, permease component, ABC transporter, ...
Authors:Liu, F, Liang, J, Zhang, B, Gao, Y, Yang, X, Hu, T, Rao, Z.
Deposit date:2020-06-08
Release date:2020-12-02
Last modified:2024-03-27
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Structural basis of trehalose recycling by the ABC transporter LpqY-SugABC.
Sci Adv, 6, 2020
7LHN
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Crystal structure of Q108K:K40L:T51V:T53C:R58W:T29L:Y19W:Q4A mutant of cellular retinol binding protein II complex with all-trans-retinal after exposure to visible light
Descriptor: GLYCEROL, RETINAL, Retinol-binding protein 2
Authors:Ehyaei, N, Geiger, J.H, Borhan, B.
Deposit date:2021-01-25
Release date:2021-04-14
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (2.11 Å)
Cite:Crystal structure of Q108K:K40L:T51V:T53C:R58W:T29L:Y19W:Q4A mutant of cellular retinol binding protein II complex with all-trans-retinal after exposure to visible light
To Be Published
7LHM
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Crystal structure of Q108K:K40L:T51V:T53C:R58W:T29L:Y19W:Q4A:Q38L mutant of cellular retinol binding protein II complex with all-trans-retinal
Descriptor: ACETATE ION, GLYCEROL, RETINAL, ...
Authors:Ehyaei, N, Geiger, J.H, Borhan, B.
Deposit date:2021-01-25
Release date:2021-04-14
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Crystal structure of Q108K:K40L:T51V:T53C:R58W:T29L:Y19W:Q4A:Q38L mutant of cellular retinol binding protein II complex with all-trans-retinal
To Be Published

222036

数据于2024-07-03公开中

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