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PDB: 1387 results

8F17
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BU of 8f17 by Molmil
Structure of the STUB1 TPR domain in complex with H204, an all-D Helicon Polypeptide
Descriptor: 1,2-ETHANEDIOL, E3 ubiquitin-protein ligase CHIP, N,N'-(1,4-phenylene)diacetamide, ...
Authors:Li, K, Callahan, A.J, Travaline, T.L, Tokareva, O.S, Swiecicki, J.-M, Verdine, G.L, Pentelute, B.L, McGee, J.H.
Deposit date:2022-11-04
Release date:2023-02-15
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.21 Å)
Cite:Single-Shot Flow Synthesis of D-Proteins for Mirror-Image Phage Display
Chemrxiv, 2023
3HU7
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BU of 3hu7 by Molmil
Structural characterization and binding studies of a plant pathogenesis related protein heamanthin from haemanthus multiflorus reveal its dual inhibitory effects against xylanase and alpha-amylase
Descriptor: ACETATE ION, Haementhin, PHOSPHATE ION
Authors:Kumar, S, Singh, N, Sinha, M, Bhushan, A, Kaur, P, Srinivasan, A, Sharma, S, Singh, T.P.
Deposit date:2009-06-13
Release date:2010-04-28
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure determination and inhibition studies of a novel xylanase and alpha-amylase inhibitor protein (XAIP) from Scadoxus multiflorus.
Febs J., 277, 2010
8F15
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BU of 8f15 by Molmil
Structure of the STUB1 TPR domain in complex with H202, an all-D Helicon Polypeptide
Descriptor: 1,2-ETHANEDIOL, E3 ubiquitin-protein ligase CHIP, N,N'-(1,4-phenylene)diacetamide, ...
Authors:Li, K, Callahan, A.J, Travaline, T.L, Tokareva, O.S, Swiecicki, J.-M, Verdine, G.L, Pentelute, B.L, McGee, J.H.
Deposit date:2022-11-04
Release date:2023-02-15
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.73 Å)
Cite:Single-Shot Flow Synthesis of D-Proteins for Mirror-Image Phage Display
Chemrxiv, 2023
8F0Z
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BU of 8f0z by Molmil
Structure of the MDM2 P53 binding domain in complex with H101, an all-D Helicon Polypeptide
Descriptor: CHLORIDE ION, E3 ubiquitin-protein ligase Mdm2, H101, ...
Authors:Li, K, Callahan, A.J, Travaline, T.L, Tokareva, O.S, Swiecicki, J.-M, Verdine, G.L, Pentelute, B.L, McGee, J.H.
Deposit date:2022-11-04
Release date:2023-02-15
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.61 Å)
Cite:Single-Shot Flow Synthesis of D-Proteins for Mirror-Image Phage Display
Chemrxiv, 2023
8F16
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BU of 8f16 by Molmil
Structure of the STUB1 TPR domain in complex with H203, an all-D Helicon Polypeptide
Descriptor: 1,2-ETHANEDIOL, E3 ubiquitin-protein ligase CHIP, N,N'-(1,4-phenylene)diacetamide, ...
Authors:Li, K, Callahan, A.J, Travaline, T.L, Tokareva, O.S, Swiecicki, J.-M, Verdine, G.L, Pentelute, B.L, McGee, J.H.
Deposit date:2022-11-04
Release date:2023-02-15
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.56 Å)
Cite:Single-Shot Flow Synthesis of D-Proteins for Mirror-Image Phage Display
Chemrxiv, 2023
8F14
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BU of 8f14 by Molmil
Structure of the STUB1 TPR domain in complex with H201, an all-D Helicon Polypeptide
Descriptor: 1,2-ETHANEDIOL, E3 ubiquitin-protein ligase CHIP, N,N'-(1,4-phenylene)diacetamide, ...
Authors:Li, K, Callahan, A.J, Travaline, T.L, Tokareva, O.S, Swiecicki, J.-M, Verdine, G.L, Pentelute, B.L, McGee, J.H.
Deposit date:2022-11-04
Release date:2023-02-15
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.69 Å)
Cite:Single-Shot Flow Synthesis of D-Proteins for Mirror-Image Phage Display
Chemrxiv, 2023
8F10
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BU of 8f10 by Molmil
Structure of the MDM2 P53 binding domain in complex with H102, an all-D Helicon Polypeptide
Descriptor: 1,2-ETHANEDIOL, CHLORIDE ION, E3 ubiquitin-protein ligase Mdm2, ...
Authors:Li, K, Callahan, A.J, Travaline, T.L, Tokareva, O.S, Swiecicki, J.-M, Verdine, G.L, Pentelute, B.L, McGee, J.H.
Deposit date:2022-11-04
Release date:2023-02-15
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.28 Å)
Cite:Single-Shot Flow Synthesis of D-Proteins for Mirror-Image Phage Display
Chemrxiv, 2023
1OWQ
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BU of 1owq by Molmil
Crystal structure of a 40 kDa signalling protein (SPC-40) secreted during involution
Descriptor: 2-acetamido-2-deoxy-alpha-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, signal processing protein
Authors:Kumar, J, Sharma, S, Jasti, J, Bhushan, A, Singh, T.P.
Deposit date:2003-03-29
Release date:2004-05-18
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of a 40 kDa signalling protein (SPC-40) secreted during involution
To be Published
6JCE
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BU of 6jce by Molmil
NMR solution and X-ray crystal structures of a DNA containing both right-and left-handed parallel-stranded G-quadruplexes
Descriptor: 29-mer DNA
Authors:Winnerdy, F.R, Bakalar, B, Maity, A, Vandana, J.J, Mechulam, Y, Schmitt, E, Phan, A.T.
Deposit date:2019-01-28
Release date:2019-07-10
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:NMR solution and X-ray crystal structures of a DNA molecule containing both right- and left-handed parallel-stranded G-quadruplexes.
Nucleic Acids Res., 47, 2019
6S5I
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BU of 6s5i by Molmil
Structure of the Lausanne variant of myxoma virus M062 protein
Descriptor: M62R, NICKEL (II) ION
Authors:O'Byrne, P, Khan, A.R.
Deposit date:2019-07-01
Release date:2021-12-01
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.45 Å)
Cite:Structure of the Lausanne variant of myxoma virus M062 protein
To Be Published
2MAY
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BU of 2may by Molmil
Structure of a G-quadruplex containing a single LNA modification
Descriptor: DNA_(5'-D(*TP*TP*GP*LGP*GP*TP*TP*AP*GP*GP*GP*TP*TP*AP*GP*GP*GP*TP*TP*AP*GP*GP*GP*A)-3')
Authors:Lech, C, Heddi, B, Adrian, M, Li, Z, Phan, A.T.
Deposit date:2013-07-22
Release date:2015-02-04
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Engineering G4: Towards effective incorporation of locked nucleic acid into G-quadruplexes
To be Published
2M91
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BU of 2m91 by Molmil
Structure of d[GGGAAGGGCGCGAAGCATTCGCGAGGTAGG] quadruplex-duplex hybrid
Descriptor: 30-MER DNA
Authors:Lim, K.W, Phan, A.T.
Deposit date:2013-05-30
Release date:2013-07-10
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structural basis of DNA quadruplex-duplex junction formation.
Angew.Chem.Int.Ed.Engl., 52, 2013
2M90
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BU of 2m90 by Molmil
Structure of d[GCGCGAAGCATTCGCGGGGAGGTGGGGAAGGG] quadruplex-duplex hybrid
Descriptor: 32-MER DNA
Authors:Lim, K.W, Phan, A.T.
Deposit date:2013-05-30
Release date:2013-07-10
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structural basis of DNA quadruplex-duplex junction formation.
Angew.Chem.Int.Ed.Engl., 52, 2013
2M8Y
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BU of 2m8y by Molmil
Structure of d[CGCGAAGCATTCGCG] hairpin
Descriptor: DNA (5'-D(*CP*GP*CP*GP*AP*AP*GP*CP*AP*TP*TP*CP*GP*CP*G)-3')
Authors:Lim, K.W, Phan, A.T.
Deposit date:2013-05-30
Release date:2013-07-10
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structural basis of DNA quadruplex-duplex junction formation.
Angew.Chem.Int.Ed.Engl., 52, 2013
3CG9
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BU of 3cg9 by Molmil
Crystal structure of the complex of peptidoglycan recognition protein with methyloxane-2,3,4,5-tetrol at 2.9 A resolution
Descriptor: L(+)-TARTARIC ACID, Peptidoglycan recognition protein, alpha-L-rhamnopyranose
Authors:Sharma, P, Kaur, A, Singh, N, Sharma, S, Bhushan, A, Pathak, K.M.L, Kaur, P, Singh, T.P.
Deposit date:2008-03-05
Release date:2008-04-01
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Crystal structure of the complex of peptidoglycan recognition protein with methyoxane-2,3,4,5-tetrol at 2.9 A resolution
To be Published
2MB3
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BU of 2mb3 by Molmil
Solution structure of an intramolecular (3+1) human telomeric G-quadruplex bound to a telomestatin derivative
Descriptor: (12S,27S)-12,27-bis(4-aminobutyl)-4,30-dimethyl-3,7,14,18,22,29-hexaoxa-11,26,31,32,33,34,35,36-octaazaheptacyclo[26.2. 1.1~2,5~.1~6,9~.1~13,16~.1~17,20~.1~21,24~]hexatriaconta-1(30),2(36),4,6(35),8,13(34),15,17(33),19,21(32),23,28(31)-dode caene-10,25-dione, DNA_(5'-D(*TP*TP*GP*GP*GP*TP*TP*AP*GP*GP*GP*TP*TP*AP*GP*GP*GP*TP*TP*AP*GP*GP*GP*A)-3')
Authors:Chung, W.J, Heddi, B, Tera, M, Iida, K, Nagasawa, K, Phan, A.T.
Deposit date:2013-07-24
Release date:2013-08-28
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Solution structure of an intramolecular (3 + 1) human telomeric g-quadruplex bound to a telomestatin derivative.
J.Am.Chem.Soc., 135, 2013
2MB4
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BU of 2mb4 by Molmil
Solution structure of a stacked dimeric G-quadruplex formed by a segment of the human CEB1 minisatellite
Descriptor: DNA_(5'-D(*AP*GP*GP*GP*GP*GP*GP*AP*GP*GP*GP*AP*GP*GP*GP*TP*GP*G)-3')
Authors:Adrian, M, Ang, D.J, Lech, C, Heddi, B, Nicolas, A, Phan, A.T.
Deposit date:2013-07-25
Release date:2014-05-28
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structure and Conformational Dynamics of a Stacked Dimeric G-Quadruplex Formed by the Human CEB1 Minisatellite.
J.Am.Chem.Soc., 136, 2014
2M93
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BU of 2m93 by Molmil
Structure of d[TTGGGTGGGCGCGAAGCATTCGCGGGGTGGGT] quadruplex-duplex hybrid
Descriptor: 32-MER DNA
Authors:Lim, K.W, Phan, A.T.
Deposit date:2013-05-30
Release date:2013-07-10
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structural basis of DNA quadruplex-duplex junction formation.
Angew.Chem.Int.Ed.Engl., 52, 2013
2MGN
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BU of 2mgn by Molmil
Solution structure of a G-quadruplex bound to the bisquinolinium compound Phen-DC3
Descriptor: 5'-D(*TP*GP*AP*GP*GP*GP*TP*GP*GP*TP*GP*AP*GP*GP*GP*TP*GP*GP*GP*GP*AP*AP*GP*G)-3', N2,N9-bis(1-methylquinolin-3-yl)-1,10-phenanthroline-2,9-dicarboxamide
Authors:Chung, W.J, Heddi, B, Hamon, F, Teulade-Fichou, M.P, Phan, A.T.
Deposit date:2013-11-01
Release date:2014-01-22
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Solution Structure of a G-quadruplex Bound to the Bisquinolinium Compound Phen-DC3.
Angew.Chem.Int.Ed.Engl., 53, 2014
6SPF
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BU of 6spf by Molmil
Pseudomonas aeruginosa 70s ribosome from an aminoglycoside resistant clinical isolate
Descriptor: 16S rRNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ...
Authors:Halfon, Y, Jimenez-Fernande, A, La Ros, R, Espinos, R, Krogh Johansen, H, Matzov, D, Eyal, Z, Bashan, A, Zimmerman, E, Belousoff, M, Molin, S, Yonath, A.
Deposit date:2019-09-01
Release date:2019-10-23
Last modified:2024-10-16
Method:ELECTRON MICROSCOPY (2.89 Å)
Cite:Structure ofPseudomonas aeruginosaribosomes from an aminoglycoside-resistant clinical isolate.
Proc.Natl.Acad.Sci.USA, 116, 2019
7CV3
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BU of 7cv3 by Molmil
Quadruplex-duplex hybrid structure in the PIM1 gene, Form 1
Descriptor: PIM1 promoter, Form 1
Authors:Winnerdy, F.R, Tan, D.J.Y, Lim, K.W, Phan, A.T.
Deposit date:2020-08-25
Release date:2020-10-07
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Coexistence of two quadruplex-duplex hybrids in the PIM1 gene.
Nucleic Acids Res., 48, 2020
2MWZ
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BU of 2mwz by Molmil
Xanthine and 8-oxoguanine in G-quadruplexes: formation of a G G X O tetrad
Descriptor: DNA (5'-D(*TP*TP*GP*GP*GP*TP*TP*AP*(8OG)P*GP*GP*TP*TP*AP*GP*GP*(3ZO)P*TP*TP*AP*GP*GP*GP*A)-3')
Authors:Cheong, V.V, Heddi, B, Lech, C.J, Phan, A.T.
Deposit date:2014-12-04
Release date:2015-10-14
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Xanthine and 8-oxoguanine in G-quadruplexes: formation of a GGXO tetrad.
Nucleic Acids Res., 43, 2015
6SPE
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BU of 6spe by Molmil
Pseudomonas aeruginosa 30s ribosome from a clinical isolate
Descriptor: 16S ribosomal RNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ...
Authors:Halfon, Y, Jimenez-Fernande, A, La Ros, R, Espinos, R, Krogh Johansen, H, Matzov, D, Eyal, Z, Bashan, A, Zimmerman, E, Belousoff, M, Molin, S, Yonath, A.
Deposit date:2019-09-01
Release date:2019-10-16
Last modified:2024-10-16
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:Structure ofPseudomonas aeruginosaribosomes from an aminoglycoside-resistant clinical isolate.
Proc.Natl.Acad.Sci.USA, 116, 2019
1CY1
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BU of 1cy1 by Molmil
COMPLEX OF E.COLI DNA TOPOISOMERASE I WITH 5'PTPTPT
Descriptor: DNA TOPOISOMERASE I, PHOSPHATE ION, THYMIDINE-3',5'-DIPHOSPHATE, ...
Authors:Feinberg, H, Changela, A, Mondragon, A.
Deposit date:1999-08-31
Release date:2000-03-03
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Protein-nucleotide interactions in E. coli DNA topoisomerase I.
Nat.Struct.Biol., 6, 1999
6SPC
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BU of 6spc by Molmil
Pseudomonas aeruginosa 30s ribosome from an aminoglycoside resistant clinical isolate
Descriptor: 16S rRNA, 30S ribosomal protein S10, 30S ribosomal protein S11, ...
Authors:Halfon, Y, Jimenez-Fernande, A, La Ros, R, Espinos, R, Krogh Johansen, H, Matzov, D, Eyal, Z, Bashan, A, Zimmerman, E, Belousoff, M, Molin, S, Yonath, A.
Deposit date:2019-09-01
Release date:2019-10-16
Last modified:2024-10-16
Method:ELECTRON MICROSCOPY (2.95 Å)
Cite:Structure ofPseudomonas aeruginosaribosomes from an aminoglycoside-resistant clinical isolate.
Proc.Natl.Acad.Sci.USA, 116, 2019

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数据于2024-10-30公开中

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