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PDB: 497 results

4CF4
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Mutagenesis of a Rhodobacteraceae L-haloacid dehalogenase
Descriptor: L-HALOACID DEHALOGENASE
Authors:Novak, H.R, Sayer, C, Isupov, M.N, Littlechild, J.A.
Deposit date:2013-11-13
Release date:2014-11-26
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.14 Å)
Cite:Mutagenesis of a Rhodobacteraceae L-Haloacid Dehalogenase
To be Published
3ZNQ
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BU of 3znq by Molmil
IN VITRO AND IN VIVO INHIBITION OF HUMAN D-AMINO ACID OXIDASE: REGULATION OF D-SERINE CONCENTRATION IN THE BRAIN
Descriptor: 3-PHENETHYL-4H-FURO[3,2-B]PYRROLE-5-CARBOXYLIC ACID, D-AMINO-ACID OXIDASE, FLAVIN-ADENINE DINUCLEOTIDE
Authors:Hopkins, S.C, Heffernan, M.L.R, Saraswat, L.D, Bowen, C.A, Melnick, L, Hardy, L.W, Orsini, M.A, Allen, M.S, Koch, P, Spear, K.L, Foglesong, R.J, Soukri, M, Chytil, M, Fang, Q.K, Jones, S.W, Varney, M.A, Panatier, A, Oliet, S.H.R, Pollegioni, L, Piubelli, L, Molla, G, Nardini, M, Large, T.H.
Deposit date:2013-02-15
Release date:2013-05-15
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:Structural, Kinetic, and Pharmacodynamic Mechanisms of D-Amino Acid Oxidase Inhibition by Small Molecules.
J.Med.Chem., 56, 2013
4AAQ
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BU of 4aaq by Molmil
ATP-triggered molecular mechanics of the chaperonin GroEL
Descriptor: 60 KDA CHAPERONIN, ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
Authors:Clare, D.K, Vasishtan, D, Stagg, S, Quispe, J, Farr, G.W, Topf, M, Horwich, A.L, Saibil, H.R.
Deposit date:2011-12-05
Release date:2012-12-12
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (8 Å)
Cite:ATP-Triggered Conformational Changes Delineate Substrate-Binding and -Folding Mechanics of the Groel Chaperonin.
Cell(Cambridge,Mass.), 149, 2012
1ZNA
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BU of 1zna by Molmil
CONFORMATION AND DYNAMICS IN A Z-DNA TETRAMER
Descriptor: DNA (5'-D(*CP*GP*CP*G)-3')
Authors:Drew, H.R, Dickerson, R.E.
Deposit date:1981-01-26
Release date:1981-03-18
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Conformation and dynamics in a Z-DNA tetramer.
J.Mol.Biol., 152, 1981
256L
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BU of 256l by Molmil
BACTERIOPHAGE T4 LYSOZYME
Descriptor: LYSOZYME
Authors:Faber, H.R, Matthews, B.W.
Deposit date:1998-02-24
Release date:1998-05-27
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:A mutant T4 lysozyme displays five different crystal conformations.
Nature, 348, 1990
2CFQ
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Sugar Free Lactose Permease at neutral pH
Descriptor: LACTOSE PERMEASE, MERCURY (II) ION
Authors:Mirza, O, Guan, L, Verner, G, Iwata, S, Kaback, H.R.
Deposit date:2006-02-22
Release date:2006-03-13
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:Structural Evidence for Induced Fit and a Mechanism for Sugar/H(+) Symport in Lacy.
Embo J., 25, 2006
2K9A
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BU of 2k9a by Molmil
The Solution Structure of the Arl2 Effector, BART
Descriptor: ADP-ribosylation factor-like protein 2-binding protein
Authors:Bailey, L.K, Campbell, L.J, Evetts, K.A, Littlefield, K, Rajendra, E, Nietlispach, D, Owen, D, Mott, H.R.
Deposit date:2008-10-06
Release date:2008-11-11
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:The Structure of Binder of Arl2 (BART) Reveals a Novel G Protein Binding Domain: IMPLICATIONS FOR FUNCTION.
J.Biol.Chem., 284, 2009
2KLE
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BU of 2kle by Molmil
ISIC Refined Solution Structure of the Calcium Binding Domain of the C-terminal Cytosolic Domain of Polycystin-2
Descriptor: Polycystin-2
Authors:Kalbitzer, H.R.
Deposit date:2009-07-01
Release date:2009-07-28
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:NMR-assignments of a cytosolic domain of the C-terminus of polycystin-2
Biomol.Nmr Assign., 3, 2009
2KER
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BU of 2ker by Molmil
alpha-amylase inhibitor Parvulustat (Z-2685) from Streptomyces parvulus
Descriptor: Alpha-amylase inhibitor Z-2685
Authors:Rehm, S, Han, S, Hassani, I, Sokocevic, A, Jonker, H.R.A, Engels, J.W, Schwalbe, H.
Deposit date:2009-02-02
Release date:2009-02-17
Last modified:2022-03-16
Method:SOLUTION NMR
Cite:The high resolution NMR structure of parvulustat (Z-2685) from Streptomyces parvulus FH-1641: comparison with tendamistat from Streptomyces tendae 4158
Chembiochem, 10, 2009
2KSY
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BU of 2ksy by Molmil
Solution nmr structure of sensory rhodopsin II
Descriptor: RETINAL, Sensory rhodopsin II
Authors:Gautier, A, Mott, H.R, Bostock, M.J, Kirkpatrick, J.P, Nietlispach, D.
Deposit date:2010-01-14
Release date:2010-06-02
Last modified:2015-06-10
Method:SOLUTION NMR
Cite:Structure determination of the seven-helix transmembrane receptor sensory rhodopsin II by solution NMR spectroscopy.
Nat.Struct.Mol.Biol., 17, 2010
2L2X
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Thiostrepton, oxidized at CA-CB bond of residue 9
Descriptor: Thiostrepton
Authors:Jonker, H.R.A, Baumann, S, Wolf, A, Schoof, S, Hiller, F, Schulte, K.W, Kirschner, K.N, Schwalbe, H, Arndt, H.-D.
Deposit date:2010-08-27
Release date:2011-02-02
Last modified:2013-06-26
Method:SOLUTION NMR
Cite:NMR structures of thiostrepton derivatives for characterization of the ribosomal binding site.
Angew.Chem.Int.Ed.Engl., 50, 2011
2LE4
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BU of 2le4 by Molmil
Solution structure of the HMG box DNA-binding domain of human stem cell transcription factor Sox2
Descriptor: Transcription factor SOX-2
Authors:Sahu, S.C, Markley, J.L, Tonelli, M, Bahrami, A, Eghbalnia, H.R, Center for Eukaryotic Structural Genomics (CESG)
Deposit date:2011-06-06
Release date:2011-07-27
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Solution structure of the HMG box DNA-binding domain of human stem cell transcription factor Sox2
To be Published
2LUO
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BU of 2luo by Molmil
NMR solution structure of apo-MptpA
Descriptor: LOW MOLECULAR WEIGHT PROTEIN-TYROSINE-PHOSPHATASE A
Authors:Stehle, T, Sreeramulu, S, Loehr, F, Richter, C, Saxena, K, Jonker, H.R.A, Schwalbe, H.
Deposit date:2012-06-19
Release date:2012-08-15
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:The Apo-structure of the Low Molecular Weight Protein-tyrosine Phosphatase A (MptpA) from Mycobacterium tuberculosis Allows for Better Target-specific Drug Development.
J.Biol.Chem., 287, 2012
2MBG
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BU of 2mbg by Molmil
Rlip76 (gap-gbd)
Descriptor: RalA-binding protein 1
Authors:Rajasekar, K.V, Campbell, L.J, Nietlispach, D, Owen, D, Mott, H.R.
Deposit date:2013-07-30
Release date:2013-12-04
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:The Structure of the RLIP76 RhoGAP-Ral Binding Domain Dyad: Fixed Position of the Domains Leads to Dual Engagement of Small G Proteins at the Membrane.
Structure, 21, 2013
2IVD
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BU of 2ivd by Molmil
Structure of protoporphyrinogen oxidase from Myxococcus xanthus with acifluorfen
Descriptor: (3S)-3-[(2S,3S,4R)-3,4-DIMETHYLTETRAHYDROFURAN-2-YL]BUTYL LAURATE, 5-[2-CHLORO-4-(TRIFLUOROMETHYL)PHENOXY]-2-NITROBENZOIC ACID, FLAVIN-ADENINE DINUCLEOTIDE, ...
Authors:Corradi, H.R, Corrigall, A.V, Boix, E, Mohan, C.G, Sturrock, E.D, Meissner, P.N, Acharya, K.R.
Deposit date:2006-06-12
Release date:2006-10-17
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal Structure of Protoporphyrinogen Oxidase from Myxococcus Xanthus and its Complex with the Inhibitor Acifluorfen.
J.Biol.Chem., 281, 2006
2JGS
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BU of 2jgs by Molmil
Circular permutant of avidin
Descriptor: BIOTIN, CIRCULAR PERMUTANT OF AVIDIN
Authors:Maatta, J.A.E, Hytonen, V.P, Airenne, T.T, Niskanen, E, Johnson, M.S, Kulomaa, M.S, Nordlund, H.R.
Deposit date:2007-02-14
Release date:2008-03-04
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Rational Modification of Ligand-Binding Preference of Avidin by Circular Permutation and Mutagenesis.
Chembiochem, 9, 2008
2JWH
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BU of 2jwh by Molmil
Structure of a Glycosylphosphatidylinositol-anchored Domain from a Trypanosome Variant Surface Glycoprotein
Descriptor: Variant surface glycoprotein ILTAT 1.24
Authors:Jones, N.G, Nietlispach, D, Sharma, R, Burke, D.F, Eyres, I, Mues, M, Mott, H.R, Carrington, M.
Deposit date:2007-10-12
Release date:2007-11-13
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Structure of a Glycosylphosphatidylinositol-anchored Domain from a Trypanosome Variant Surface Glycoprotein
J.Biol.Chem., 283, 2008
2JM3
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BU of 2jm3 by Molmil
Solution structure of the THAP domain from C. elegans C-terminal binding protein (CtBP)
Descriptor: Hypothetical protein, ZINC ION
Authors:Liew, C.K, Crossley, M, Mackay, J.P, Nicholas, H.R.
Deposit date:2006-09-21
Release date:2007-02-06
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Solution structure of the THAP domain from Caenorhabditis elegans C-terminal binding protein (CtBP).
J.Mol.Biol., 366, 2007
2JWG
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BU of 2jwg by Molmil
Structure of a Glycosylphosphatidylinositol-anchored Domain from a Trypanosome Variant Surface Glycoprotein
Descriptor: Variant surface glycoprotein ILTAT 1.24
Authors:Jones, N.G, Nietlispach, D, Sharma, R, Burke, D.F, Eyres, I, Mues, M, Mott, H.R, Carrington, M.
Deposit date:2007-10-12
Release date:2007-11-13
Last modified:2011-07-13
Method:SOLUTION NMR
Cite:Structure of a Glycosylphosphatidylinositol-anchored Domain from a Trypanosome Variant Surface Glycoprotein
J.Biol.Chem., 283, 2008
2N9Q
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Photoswitchable G-quadruplex
Descriptor: DNA (5'-D(*GP*GP*(AZW)P*GP*G)-3'), POTASSIUM ION
Authors:Thevarpadam, J, Bessi, I, Binas, O, Goncalves, D.P.N, Slavov, C, Jonker, H.R.A, Richter, C, Wachtveitl, J, Schwalbe, H, Heckel, A.
Deposit date:2015-12-02
Release date:2016-02-17
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Photoresponsive Formation of an Intermolecular Minimal G-Quadruplex Motif.
Angew.Chem.Int.Ed.Engl., 55, 2016
2MW4
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BU of 2mw4 by Molmil
Tetramerization domain of the Ciona intestinalis p53/p73-b transcription factor protein
Descriptor: Transcription factor protein
Authors:Heering, J.P, Jonker, H.R.A, Loehr, F, Schwalbe, H, Doetsch, V.
Deposit date:2014-10-27
Release date:2015-10-28
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structural investigations of the p53/p73 homologs from the tunicate species Ciona intestinalis reveal the sequence requirements for the formation of a tetramerization domain.
Protein Sci., 25, 2016
2K5B
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BU of 2k5b by Molmil
Human CDC37-HSP90 docking model based on NMR
Descriptor: Heat shock protein HSP 90-alpha, Hsp90 co-chaperone Cdc37
Authors:Sreeramulu, S, Jonker, H.R.A, Lancaster, C.R, Richter, C, Langer, T, Schwalbe, H.
Deposit date:2008-06-26
Release date:2008-12-09
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:The human Cdc37.Hsp90 complex studied by heteronuclear NMR spectroscopy
J.Biol.Chem., 284, 2009
2KWH
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Ral binding domain of RLIP76 (RalBP1)
Descriptor: RalA-binding protein 1
Authors:Fenwick, R.B, Campbell, L.J, Rajasekar, K, Prasannan, S, Nietlispach, D, Camonis, J, Owen, D, Mott, H.R.
Deposit date:2010-04-12
Release date:2010-09-01
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:The RalB-RLIP76 complex reveals a novel mode of ral-effector interaction
Structure, 18, 2010
2KWI
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RalB-RLIP76 (RalBP1) complex
Descriptor: MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER, RalA-binding protein 1, ...
Authors:Fenwick, R.B, Campbell, L.J, Rajasekar, K, Prasannan, S, Nietlispach, D, Camonis, J, Owen, D, Mott, H.R.
Deposit date:2010-04-12
Release date:2010-09-01
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:The RalB-RLIP76 complex reveals a novel mode of ral-effector interaction
Structure, 18, 2010
2KMJ
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High resolution NMR solution structure of a complex of HIV-2 TAR RNA and a synthetic tripeptide in a 1:2 stoichiometry
Descriptor: Pyrimidinylpeptide, RNA (28-MER)
Authors:Ferner, J, Suhartono, M, Breitung, S, Jonker, H.R.A, Hennig, M, Woehnert, J, Goebel, M, Schwalbe, H.
Deposit date:2009-07-30
Release date:2009-08-18
Last modified:2023-11-15
Method:SOLUTION NMR
Cite:Structures of HIV TAR RNA-ligand complexes reveal higher binding stoichiometries.
Chembiochem, 10, 2009

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