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PDB: 439 results

3KDY
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X-ray crystal structure of tyrosine aminomutase mutant construct
Descriptor: Histidine ammonia-lyase
Authors:Cooke, H.A, Bruner, S.D.
Deposit date:2009-10-23
Release date:2010-07-07
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Probing the active site of MIO-dependent aminomutases, key catalysts in the biosynthesis of beta-amino acids incorporated in secondary metabolites
Biopolymers, 93, 2010
2GO4
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BU of 2go4 by Molmil
Crystal structure of Aquifex aeolicus LpxC complexed with TU-514
Descriptor: 1,5-ANHYDRO-2-C-(CARBOXYMETHYL-N-HYDROXYAMIDE)-2-DEOXY-3-O-MYRISTOYL-D-GLUCITOL, CHLORIDE ION, UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase, ...
Authors:Gennadios, H.A, Whittington, D.A, Li, X, Fierke, C.A, Christianson, D.W.
Deposit date:2006-04-12
Release date:2006-07-04
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Mechanistic Inferences from the Binding of Ligands to LpxC, a Metal-Dependent Deacetylase
Biochemistry, 45, 2006
3ISO
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Crystal structure of 26 kDa GST of Clonorchis sinensis in P3221 symmetry
Descriptor: GLUTATHIONE, Putative glutathione transferase, SULFATE ION, ...
Authors:Han, Y.H, Seo, H.A, Kim, G.H, Chung, Y.J.
Deposit date:2009-08-27
Release date:2010-09-08
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:A histidine substitution confers metal binding affinity to a Schistosoma japonicum Glutathione S-transferase.
Protein Expr.Purif., 73, 2010
3IXX
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BU of 3ixx by Molmil
The pseudo-atomic structure of West Nile immature virus in complex with Fab fragments of the anti-fusion loop antibody E53
Descriptor: E53 Fab Fragment (chain H), E53 Fab Fragment (chain L), Envelope protein E, ...
Authors:Cherrier, M.V, Kaufmann, B, Nybakken, G.E, Lok, S.M, Warren, J.T, Nelson, C.A, Kostyuchenko, V.A, Holdaway, H.A, Chipman, P.R, Kuhn, R.J, Diamond, M.S, Rossmann, M.G, Fremont, D.H.
Deposit date:2009-02-26
Release date:2009-10-27
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (15 Å)
Cite:Structural basis for the preferential recognition of immature flaviviruses by a fusion-loop antibody
Embo J., 28, 2009
3IYA
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BU of 3iya by Molmil
Association of the pr peptides with dengue virus blocks membrane fusion at acidic pH
Descriptor: Envelope protein, prM protein
Authors:Yu, I, Holdaway, H.A, Chipman, P.R, Kuhn, R.J, Rossmann, M.G, Chen, J.
Deposit date:2009-06-01
Release date:2010-04-14
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (22 Å)
Cite:Association of the pr peptides with dengue virus at acidic pH blocks membrane fusion.
J.Virol., 83, 2009
1F5P
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2.9 ANGSTROM CRYSTAL STRUCTURE OF LAMPREY HEMOGLOBIN THAT HAS BEEN EXPOSED TO CARBON MONOXIDE.
Descriptor: CARBON MONOXIDE, HEMOGLOBIN V, PROTOPORPHYRIN IX CONTAINING FE
Authors:Heaslet, H.A, Royer Jr, W.E.
Deposit date:2000-06-15
Release date:2000-06-28
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Crystalline ligand transitions in lamprey hemoglobin. Structural evidence for the regulation of oxygen affinity.
J.Biol.Chem., 276, 2001
3KDZ
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BU of 3kdz by Molmil
X-ray crystal structure of a tyrosine aminomutase mutant construct with bound ligand
Descriptor: Histidine ammonia-lyase, TYROSINE
Authors:Cooke, H.A, Bruner, S.D.
Deposit date:2009-10-23
Release date:2010-07-07
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Probing the active site of MIO-dependent aminomutases, key catalysts in the biosynthesis of beta-amino acids incorporated in secondary metabolites
Biopolymers, 93, 2010
2HRE
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Structure of human ferrochelatase variant E343K with protoporphyrin IX bound
Descriptor: CHOLIC ACID, FE2/S2 (INORGANIC) CLUSTER, Ferrochelatase, ...
Authors:Medlock, A, Swartz, L, Dailey, T.A, Dailey, H.A, Lanzilotta, W.N.
Deposit date:2006-07-20
Release date:2007-03-13
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Substrate interactions with human ferrochelatase
Proc.Natl.Acad.Sci.Usa, 104, 2007
1EC6
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CRYSTAL STRUCTURE OF NOVA-2 KH3 K-HOMOLOGY RNA-BINDING DOMAIN BOUND TO 20-MER RNA HAIRPIN
Descriptor: 20-MER RNA HAIRPIN, RNA-BINDING PROTEIN NOVA-2
Authors:Lewis, H.A, Musunuru, K, Jensen, K.B, Edo, C, Chen, H.
Deposit date:2000-01-25
Release date:2000-02-21
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Sequence-specific RNA binding by a Nova KH domain: implications for paraneoplastic disease and the fragile X syndrome.
Cell(Cambridge,Mass.), 100, 2000
2GO3
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Crystal structure of Aquifex aeolicus LpxC complexed with imidazole.
Descriptor: CHLORIDE ION, GLYCEROL, IMIDAZOLE, ...
Authors:Gennadios, H.A, Whittington, D.A, Li, X, Fierke, C.A, Christianson, D.W.
Deposit date:2006-04-12
Release date:2006-07-04
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2 Å)
Cite:Mechanistic Inferences from the Binding of Ligands to LpxC, a Metal-Dependent Deacetylase
Biochemistry, 45, 2006
2GRW
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BU of 2grw by Molmil
Solution structure of the poliovirus 3'-UTR Y-stem
Descriptor: 5'-GGACCUCUCGAAAGAGAUGUCC-3'
Authors:Heus, H.A, Zoll, J, Tessari, M, van Kuppeveld, F.J.M, Melchers, W.J.G.
Deposit date:2006-04-25
Release date:2007-03-06
Last modified:2024-05-29
Method:SOLUTION NMR
Cite:Breaking pseudo-twofold symmetry in the poliovirus 3'-UTR Y-stem by restoring Watson-Crick base pairs.
Rna, 13, 2007
1CTL
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BU of 1ctl by Molmil
STRUCTURE OF THE CARBOXY-TERMINAL LIM DOMAIN FROM THE CYSTEINE RICH PROTEIN CRP
Descriptor: AVIAN CYSTEINE RICH PROTEIN, ZINC ION
Authors:Perez-Alvarado, G.C, Miles, C, Michelsen, J.W, Louis, H.A, Winge, D.R, Beckerle, M.C, Summers, M.F.
Deposit date:1995-01-06
Release date:1995-06-03
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Structure of the carboxy-terminal LIM domain from the cysteine rich protein CRP.
Nat.Struct.Biol., 1, 1994
2HRC
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BU of 2hrc by Molmil
1.7 angstrom structure of human ferrochelatase variant R115L
Descriptor: CHLORIDE ION, CHOLIC ACID, FE2/S2 (INORGANIC) CLUSTER, ...
Authors:Medlock, A, Swartz, L, Dailey, T.A, Dailey, H.A, Lanzilotta, W.N.
Deposit date:2006-07-20
Release date:2007-03-13
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Substrate interactions with human ferrochelatase
Proc.Natl.Acad.Sci.Usa, 104, 2007
2JP8
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BU of 2jp8 by Molmil
Angiotensin 1-7
Descriptor: Angiotensin-(1-7)
Authors:Lula, I, Denadai, A.L, Resende, J.M, de Souza, F.B, de Lima, G.F, Pilo-Veloso, D, Heine, T, Duarte, H.A, Santos, R.A.S, Sinesterra, R.D.
Deposit date:2007-04-27
Release date:2007-10-30
Last modified:2023-12-20
Method:SOLUTION NMR
Cite:Study of angiotensin-(1-7) vasoactive peptide and its beta-cyclodextrin inclusion complexes: complete sequence-specific NMR assignments and structural studies
Peptides, 28, 2007
2JV6
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BU of 2jv6 by Molmil
YF ED3 Protein NMR Structure
Descriptor: Envelope protein E
Authors:Volk, D.E, Gandham, S.H.A, May, F.J, Anderson, A, Barrett, A.D.T, Gorenstein, D.G.
Deposit date:2007-09-12
Release date:2008-09-16
Last modified:2022-03-16
Method:SOLUTION NMR
Cite:Yellow Fever Virus Envelope Protein Domain III: A Convergence of Structure and Phylogenetics
To be Published
1HRK
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BU of 1hrk by Molmil
CRYSTAL STRUCTURE OF HUMAN FERROCHELATASE
Descriptor: CHOLIC ACID, FE2/S2 (INORGANIC) CLUSTER, FERROCHELATASE
Authors:Wu, C.K, Dailey, H.A, Rose, J.P, Burden, A, Sellers, V.M, Wang, B.-C.
Deposit date:2000-12-21
Release date:2001-06-22
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2 Å)
Cite:The 2.0 A structure of human ferrochelatase, the terminal enzyme of heme biosynthesis.
Nat.Struct.Biol., 8, 2001
2R69
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BU of 2r69 by Molmil
Crystal structure of Fab 1A1D-2 complexed with E-DIII of Dengue virus at 3.8 angstrom resolution
Descriptor: Heavy chain of 1A1D-2, Light chain of 1A1D-2, Major envelope protein E
Authors:Lok, S.M, Kostyuchenko, V.K, Nybakken, G.E, Holdaway, H.A, Battisti, A.J, Sukupolvi-petty, S, Sedlak, D, Fremont, D.H, Chipman, P.R, Roehrig, J.T, Diamond, M.S, Kuhn, R.J, Rossmann, M.G.
Deposit date:2007-09-05
Release date:2007-12-25
Last modified:2018-01-24
Method:X-RAY DIFFRACTION (3.8 Å)
Cite:Binding of a neutralizing antibody to dengue virus alters the arrangement of surface glycoproteins.
Nat.Struct.Mol.Biol., 15, 2008
1IHF
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BU of 1ihf by Molmil
INTEGRATION HOST FACTOR/DNA COMPLEX
Descriptor: CADMIUM ION, DNA (35-MER), DNA (5'-D(*GP*CP*TP*TP*AP*TP*CP*AP*AP*TP*TP*TP*GP*TP*TP*GP*C P*AP*CP*C)-3'), ...
Authors:Rice, P.A, Yang, S.-W, Mizuuchi, K, Nash, H.A.
Deposit date:1996-08-21
Release date:1997-02-12
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structure of an IHF-DNA complex: a protein-induced DNA U-turn.
Cell(Cambridge,Mass.), 87, 1996
2R6P
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BU of 2r6p by Molmil
Fit of E protein and Fab 1A1D-2 into 24 angstrom resolution cryoEM map of Fab complexed with dengue 2 virus.
Descriptor: Heavy chain of 1A1D-2, Light chain of 1A1D-2, Major envelope protein E
Authors:Lok, S.M, Kostyuchenko, V.K, Holdaway, H.A, Chipman, P.R, Kuhn, R.J, Rossmann, M.G.
Deposit date:2007-09-06
Release date:2007-12-25
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (24 Å)
Cite:Binding of a neutralizing antibody to dengue virus alters the arrangement of surface glycoproteins.
Nat.Struct.Mol.Biol., 15, 2008
1INN
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BU of 1inn by Molmil
CRYSTAL STRUCTURE OF D. RADIODURANS LUXS, P21
Descriptor: AUTOINDUCER-2 PRODUCTION PROTEIN LUXS, METHIONINE, ZINC ION
Authors:Lewis, H.A, Furlong, E.B, Bergseid, M.G, Sanderson, W.E, Buchanan, S.G.
Deposit date:2001-05-14
Release date:2001-06-08
Last modified:2017-10-04
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:A structural genomics approach to the study of quorum sensing: crystal structures of three LuxS orthologs.
Structure, 9, 2001
1A5Q
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BU of 1a5q by Molmil
P93A VARIANT OF BOVINE PANCREATIC RIBONUCLEASE A
Descriptor: RIBONUCLEASE A, SULFATE ION
Authors:Pearson, M.A, Karplus, P.A, Dodge, R.W, Laity, J.H, Scheraga, H.A.
Deposit date:1998-02-17
Release date:1998-05-27
Last modified:2021-11-03
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Crystal structures of two mutants that have implications for the folding of bovine pancreatic ribonuclease A.
Protein Sci., 7, 1998
1A60
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BU of 1a60 by Molmil
NMR STRUCTURE OF A CLASSICAL PSEUDOKNOT: INTERPLAY OF SINGLE-AND DOUBLE-STRANDED RNA, 24 STRUCTURES
Descriptor: TYMV PSEUDOKNOT
Authors:Kolk, M.H, Van Der Graaf, M, Wijmenga, S.S, Pleij, C.W.A, Heus, H.A, Hilbers, C.W.
Deposit date:1998-03-04
Release date:1998-05-27
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:NMR structure of a classical pseudoknot: interplay of single- and double-stranded RNA.
Science, 280, 1998
1J6V
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BU of 1j6v by Molmil
CRYSTAL STRUCTURE OF D. RADIODURANS LUXS, C2
Descriptor: AUTOINDUCER-2 PRODUCTION PROTEIN LUXS, ZINC ION
Authors:Lewis, H.A, Furlong, E.B, Bergseid, M.G, Sanderson, W.E, Buchanan, S.G.
Deposit date:2001-05-14
Release date:2001-06-08
Last modified:2017-10-04
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:A structural genomics approach to the study of quorum sensing: crystal structures of three LuxS orthologs.
Structure, 9, 2001
1IML
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BU of 1iml by Molmil
CYSTEINE RICH INTESTINAL PROTEIN, NMR, 48 STRUCTURES
Descriptor: CYSTEINE RICH INTESTINAL PROTEIN, ZINC ION
Authors:Perez-Alvarado, G.C, Kosa, J.L, Louis, H.A, Beckerle, M.C, Winge, D.R, Summers, M.F.
Deposit date:1995-12-23
Release date:1996-07-11
Last modified:2024-05-01
Method:SOLUTION NMR
Cite:Structure of the cysteine-rich intestinal protein, CRIP.
J.Mol.Biol., 257, 1996
1J6W
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BU of 1j6w by Molmil
CRYSTAL STRUCTURE OF HAEMOPHILUS INFLUENZAE LUXS
Descriptor: AUTOINDUCER-2 PRODUCTION PROTEIN LUXS, METHIONINE, ZINC ION
Authors:Lewis, H.A, Furlong, E.B, Bergseid, M.G, Sanderson, W.E, Buchanan, S.G.
Deposit date:2001-05-14
Release date:2001-06-08
Last modified:2017-10-04
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:A structural genomics approach to the study of quorum sensing: crystal structures of three LuxS orthologs.
Structure, 9, 2001

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