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PDB: 249 results

5Y6J
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BU of 5y6j by Molmil
Structure of Tomato spotted wilt virus nucleocapsid protein with alternative oligomerization state
Descriptor: Nucleoprotein
Authors:Guo, Y, Dong, S, Lou, Z.
Deposit date:2017-08-12
Release date:2017-09-27
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.811 Å)
Cite:Distinct Mechanism for the Formation of the Ribonucleoprotein Complex of Tomato Spotted Wilt Virus.
J. Virol., 91, 2017
3U1U
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BU of 3u1u by Molmil
Crystal structure of RNA polymerase-associated protein RTF1 homolog Plus-3 domain
Descriptor: GLYCEROL, RNA polymerase-associated protein RTF1 homolog, SULFATE ION, ...
Authors:Guo, Y, Tempel, W, Bian, C, Wernimont, A.K, Bountra, C, Weigelt, J, Arrowsmith, C.H, Edwards, A.M, Min, J, Structural Genomics Consortium (SGC)
Deposit date:2011-09-30
Release date:2012-04-04
Last modified:2017-11-08
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Crystal structure of RNA polymerase-associated protein RTF1 homolog Plus-3 domain
to be published
4JYP
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BU of 4jyp by Molmil
crystal Structure of KAI2 Apo form
Descriptor: Hydrolase, alpha/beta fold family protein
Authors:Guo, Y, Zheng, Z, Noel, J.P.
Deposit date:2013-03-31
Release date:2013-05-08
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Smoke-derived karrikin perception by the alpha/beta-hydrolase KAI2 from Arabidopsis.
Proc.Natl.Acad.Sci.USA, 110, 2013
4JYM
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BU of 4jym by Molmil
crystal Structure of KAI2 in complex with 3-methyl-2H-furo[2,3-c]pyran-2-one
Descriptor: 3-methyl-2H-furo[2,3-c]pyran-2-one, Hydrolase, alpha/beta fold family protein
Authors:Guo, Y, Zheng, Z, Noel, J.P.
Deposit date:2013-03-30
Release date:2013-05-08
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Smoke-derived karrikin perception by the alpha/beta-hydrolase KAI2 from Arabidopsis.
Proc.Natl.Acad.Sci.USA, 110, 2013
3MQ3
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BU of 3mq3 by Molmil
Crystal structure of native bovine PDP1c
Descriptor: MANGANESE (II) ION, Pyruvate dehydrogenase phosphatase 1
Authors:Guo, Y, Ernst, S.R, Carroll, D.W, Hackert, M.L.
Deposit date:2010-04-27
Release date:2011-05-18
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Crystal Structure of Catalytic Subunit of Bovine Pyruvate Dehydrogenase Phophatase
To be Published, 2010
3MJZ
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BU of 3mjz by Molmil
The crystal structure of native FG41 MSAD
Descriptor: FG41 Malonate Semialdehyde Decarboxylase
Authors:Guo, Y, Serrano, H, Poelarends, G.J, Johnson, W.H.Jr, Hackert, M.L, Whitman, C.P.
Deposit date:2010-04-13
Release date:2011-04-27
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Kinetic, Mutational, and Structural Analysis of Malonate Semialdehyde Decarboxylase from Coryneform Bacterium Strain FG41: Mechanistic Implications for the Decarboxylase and Hydratase Activities.
Biochemistry, 52, 2013
7E21
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BU of 7e21 by Molmil
Cryo EM structure of a Na+-bound Na+,K+-ATPase in the E1 state with ATP-gamma-S
Descriptor: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Guo, Y.Y, Zhang, Y.Y, Yan, R.H, Huang, B.D, Ye, F.F, Wu, L.S, Chi, X.M, Zhou, Q.
Deposit date:2021-02-04
Release date:2022-06-15
Last modified:2022-07-20
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Cryo-EM structures of recombinant human sodium-potassium pump determined in three different states.
Nat Commun, 13, 2022
7E20
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Cryo EM structure of a K+-bound Na+,K+-ATPase in the E2 state
Descriptor: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Guo, Y.Y, Zhang, Y.Y, Yan, R.H, Huang, B.D, Ye, F.F, Wu, L.S, Chi, X.M, Zhou, Q.
Deposit date:2021-02-04
Release date:2022-06-15
Last modified:2022-07-20
Method:ELECTRON MICROSCOPY (2.7 Å)
Cite:Cryo-EM structures of recombinant human sodium-potassium pump determined in three different states.
Nat Commun, 13, 2022
7E1Z
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BU of 7e1z by Molmil
Cryo EM structure of a Na+-bound Na+,K+-ATPase in the E1 state
Descriptor: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Guo, Y.Y, Zhang, Y.Y, Yan, R.H, Huang, B.D, Ye, F.F, Wu, L.S, Chi, X.M, Zhou, Q.
Deposit date:2021-02-04
Release date:2022-06-15
Last modified:2022-07-20
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Cryo-EM structures of recombinant human sodium-potassium pump determined in three different states.
Nat Commun, 13, 2022
7X08
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BU of 7x08 by Molmil
S protein of SARS-CoV-2 in complex with 2G1
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, LINOLEIC ACID, ...
Authors:Guo, Y.Y, Zhang, Y.Y, Zhou, Q.
Deposit date:2022-02-21
Release date:2022-03-09
Last modified:2023-11-15
Method:ELECTRON MICROSCOPY (2.7 Å)
Cite:Broad ultra-potent neutralization of SARS-CoV-2 variants by monoclonal antibodies specific to the tip of RBD.
Cell Discov, 8, 2022
7WWL
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BU of 7wwl by Molmil
S protein of Delta variant in complex with ZWD12
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein, ...
Authors:Guo, Y.Y, Zhang, Y.Y, Zhou, Q.
Deposit date:2022-02-13
Release date:2022-06-01
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Broadly neutralizing antibodies against Omicron-included SARS-CoV-2 variants induced by vaccination.
Signal Transduct Target Ther, 7, 2022
7WWM
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BU of 7wwm by Molmil
S protein of Delta variant in complex with ZWC6
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Spike glycoprotein, ...
Authors:Guo, Y.Y, Zhang, Y.Y, Zhou, Q.
Deposit date:2022-02-13
Release date:2022-06-01
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:Broadly neutralizing antibodies against Omicron-included SARS-CoV-2 variants induced by vaccination.
Signal Transduct Target Ther, 7, 2022
7CJF
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BU of 7cjf by Molmil
Crystal structure of SARS-CoV-2 RBD in complex with a neutralizing antibody Fab
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Spike protein S1, antibody heavy chain, ...
Authors:Guo, Y, Li, X, Zhang, G, Fu, D, Schweizer, L, Zhang, H, Rao, Z.
Deposit date:2020-07-10
Release date:2020-11-11
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.108 Å)
Cite:A SARS-CoV-2 neutralizing antibody with extensive Spike binding coverage and modified for optimal therapeutic outcomes.
Nat Commun, 12, 2021
7CAJ
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BU of 7caj by Molmil
Crystal structure of SETDB1 Tudor domain in complexed with Compound 2.
Descriptor: 3-methyl-2-[[(3R,5R)-1-methyl-5-phenyl-piperidin-3-yl]amino]-5H-pyrrolo[3,2-d]pyrimidin-4-one, Histone-lysine N-methyltransferase SETDB1
Authors:Guo, Y.P, Liang, X, Xin, M, Luyi, H, Chengyong, W, Yang, S.Y.
Deposit date:2020-06-08
Release date:2021-04-07
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.198 Å)
Cite:Structure-Guided Discovery of a Potent and Selective Cell-Active Inhibitor of SETDB1 Tudor Domain.
Angew.Chem.Int.Ed.Engl., 60, 2021
7VMU
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BU of 7vmu by Molmil
Crystal Structure of SARS-CoV Spike Receptor-Binding Domain Complexed with Neutralizing Antibody
Descriptor: Spike protein S1, scFv E4
Authors:Guo, Y, Wang, W, Jiao, P, Yang, H, Rao, Z, Cheng, G.
Deposit date:2021-10-09
Release date:2021-11-03
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.89 Å)
Cite:Antibody engineering improves neutralization activity against K417 spike mutant SARS-CoV-2 variants.
Cell Biosci, 12, 2022
7CJT
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BU of 7cjt by Molmil
Crystal Structure of SETDB1 Tudor domain in complexed with (R,R)-59
Descriptor: 2-[[(3~{R},5~{R})-1-methyl-5-(4-phenylmethoxyphenyl)piperidin-3-yl]amino]-3-prop-2-enyl-5~{H}-pyrrolo[3,2-d]pyrimidin-4-one, Histone-lysine N-methyltransferase SETDB1
Authors:Guo, Y.P, Liang, X, Mao, X, Wu, C, Luyi, H, Yang, S.
Deposit date:2020-07-13
Release date:2021-04-14
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.474 Å)
Cite:Structure-Guided Discovery of a Potent and Selective Cell-Active Inhibitor of SETDB1 Tudor Domain.
Angew.Chem.Int.Ed.Engl., 60, 2021
6LR1
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BU of 6lr1 by Molmil
Hexachlorobenzene Monooxygenase (HcbA1) from Nocardioides sp. strain PD653
Descriptor: Hexachlorobenzene oxidative dehalogenase
Authors:Guo, Y, Zheng, J.T, Zhou, N.Y.
Deposit date:2020-01-15
Release date:2020-01-29
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Hexachlorobenzene Monooxygenase Substrate Selectivity and Catalysis: Structural and Biochemical Insights.
Appl.Environ.Microbiol., 87, 2020
6J2S
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BU of 6j2s by Molmil
Structure of HitA bound to gallium from Pseudomonas aeruginosa
Descriptor: Ferric iron-binding periplasmic protein, GALLIUM (III) ION, PHOSPHATE ION
Authors:Guo, Y, Li, H.Y, Sun, H.Z, Xia, W.
Deposit date:2019-01-02
Release date:2020-01-01
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.73005116 Å)
Cite:Identification and Characterization of a Metalloprotein Involved in Gallium Internalization in Pseudomonas aeruginosa.
Acs Infect Dis., 5, 2019
7CZA
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BU of 7cza by Molmil
Hexachlorobenzene monooxygenase (HcbA1) from Nocardioides sp. strain PD653 complexed with FMN
Descriptor: FLAVIN MONONUCLEOTIDE, Hexachlorobenzene oxidative dehalogenase
Authors:Guo, Y, Zheng, J.T, Zhou, N.Y.
Deposit date:2020-09-07
Release date:2020-09-16
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3.21 Å)
Cite:Hexachlorobenzene Monooxygenase Substrate Selectivity and Catalysis: Structural and Biochemical Insights.
Appl.Environ.Microbiol., 87, 2020
7DBW
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BU of 7dbw by Molmil
PnpA1, the oxygenase component of a two-component para-nitrophenol hydroxylase from Rhodococcus imtechensis RKJ300
Descriptor: 4-hydroxyphenylacetate 3-hydroxylase
Authors:Guo, Y, Zheng, J.T, Zhou, N.Y.
Deposit date:2020-10-22
Release date:2020-11-04
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Single-Component and Two-Component para -Nitrophenol Monooxygenases: Structural Basis for Their Catalytic Difference.
Appl.Environ.Microbiol., 87, 2021
6KZ6
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BU of 6kz6 by Molmil
Crystal structure of ASFV dUTPase
Descriptor: 2'-DEOXYURIDINE 5'-MONOPHOSPHATE, E165R, MAGNESIUM ION
Authors:Guo, Y, Chen, C, Li, G.B, Cao, L, Wang, C.W.
Deposit date:2019-09-23
Release date:2019-11-13
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (2.187 Å)
Cite:Structural Insight into African Swine Fever Virus dUTPase Reveals a Novel Folding Pattern in the dUTPase Family.
J.Virol., 94, 2020
7VIB
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BU of 7vib by Molmil
Crystal structure of human ACE2 and GX/P2V RBD
Descriptor: Angiotensin-converting enzyme 2, Spike glycoprotein, ZINC ION
Authors:Guo, Y, Cao, W, Jia, N, Wang, W, Yuan, S, Wang, Y.
Deposit date:2021-09-26
Release date:2022-10-05
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Crystal structure of human ACE2 and GX/P2V RBD
To Be Published
6IWF
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BU of 6iwf by Molmil
Crystal structure of HitA from Pseudomonas aeruginosa
Descriptor: Ferric iron-binding protein HitA
Authors:Guo, Y, Zhengrui, Z, Li, H.
Deposit date:2018-12-05
Release date:2019-12-11
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.70662332 Å)
Cite:Identification and Characterization of a Metalloprotein Involved in Gallium Internalization in Pseudomonas aeruginosa.
Acs Infect Dis., 5, 2019
7D2F
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BU of 7d2f by Molmil
Lp major histidine acid phosphatase mutant D281A/5'-AMP
Descriptor: ADENOSINE MONOPHOSPHATE, Major acid phosphatase
Authors:Guo, Y, Teng, Y.
Deposit date:2020-09-16
Release date:2021-09-22
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural insights into a new substrate binding mode of a histidine acid phosphatase from Legionella pneumophila.
Biochem.Biophys.Res.Commun., 540, 2021
7DOQ
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BU of 7doq by Molmil
Lp major histidine acid phosphatase mutant D281A/5'-AMP
Descriptor: Acid phosphatase, PHOSPHATE ION
Authors:Guo, Y, Teng, Y.
Deposit date:2020-12-16
Release date:2021-12-22
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural insights into a new substrate binding mode of a histidine acid phosphatase from Legionella pneumophila.
Biochem.Biophys.Res.Commun., 540, 2021

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数据于2024-05-29公开中

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