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PDB: 195 results

1N02
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BU of 1n02 by Molmil
Solution Structure of a Circular-Permuted Variant of the Potent HIV-inactivating Protein Cyanovirin-N
Descriptor: Cyanovirin-N
Authors:Barrientos, L.G, Gronenborn, A.M.
Deposit date:2002-10-10
Release date:2002-12-18
Last modified:2020-02-05
Method:SOLUTION NMR
Cite:Solution Structure of a Circular-Permuted Variant of the Potent HIV-inactivating Protein Cyanovirin-N: Structural Basis for Protein Stability and Oligosaccharide Interaction
J.Mol.Biol., 325, 2003
6GAT
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BU of 6gat by Molmil
SOLUTION NMR STRUCTURE OF THE L22V MUTANT DNA BINDING DOMAIN OF AREA COMPLEXED TO A 13 BP DNA CONTAINING A TGATA SITE, REGULARIZED MEAN STRUCTURE
Descriptor: DNA (5'-D(*CP*AP*GP*TP*GP*AP*TP*AP*GP*AP*GP*AP*C)-3'), DNA (5'-D(*GP*TP*CP*TP*CP*TP*AP*TP*CP*AP*CP*TP*G)-3'), NITROGEN REGULATORY PROTEIN AREA, ...
Authors:Clore, G.M, Starich, M, Wikstrom, M, Gronenborn, A.M.
Deposit date:1997-11-07
Release date:1998-01-28
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:The solution structure of the Leu22-->Val mutant AREA DNA binding domain complexed with a TGATAG core element defines a role for hydrophobic packing in the determination of specificity.
J.Mol.Biol., 277, 1998
6HIR
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BU of 6hir by Molmil
SOLUTION STRUCTURE OF RECOMBINANT HIRUDIN AND THE LYS-47 (RIGHT ARROW) GLU MUTANT. A NUCLEAR MAGNETIC RESONANCE AND HYBRID DISTANCE GEOMETRY-DYNAMICAL SIMULATED ANNEALING STUDY
Descriptor: HIRUDIN VARIANT-1
Authors:Clore, G.M, Gronenborn, A.M.
Deposit date:1990-01-09
Release date:1990-01-15
Last modified:2017-11-29
Method:SOLUTION NMR
Cite:Solution structure of recombinant hirudin and the Lys-47----Glu mutant: a nuclear magnetic resonance and hybrid distance geometry-dynamical simulated annealing study.
Biochemistry, 28, 1989
7GAT
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BU of 7gat by Molmil
SOLUTION NMR STRUCTURE OF THE L22V MUTANT DNA BINDING DOMAIN OF AREA COMPLEXED TO A 13 BP DNA CONTAINING A TGATA SITE, 34 STRUCTURES
Descriptor: DNA (5'-D(*CP*AP*GP*TP*GP*AP*TP*AP*GP*AP*GP*AP*C)-3'), DNA (5'-D(*GP*TP*CP*TP*CP*TP*AP*TP*CP*AP*CP*TP*G)-3'), NITROGEN REGULATORY PROTEIN AREA, ...
Authors:Clore, G.M, Starich, M, Wikstrom, M, Gronenborn, A.M.
Deposit date:1997-11-07
Release date:1998-01-28
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:The solution structure of the Leu22-->Val mutant AREA DNA binding domain complexed with a TGATAG core element defines a role for hydrophobic packing in the determination of specificity.
J.Mol.Biol., 277, 1998
5HIR
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BU of 5hir by Molmil
SOLUTION STRUCTURE OF RECOMBINANT HIRUDIN AND THE LYS-47 (RIGHT ARROW) GLU MUTANT. A NUCLEAR MAGNETIC RESONANCE AND HYBRID DISTANCE GEOMETRY-DYNAMICAL SIMULATED ANNEALING STUDY
Descriptor: HIRUDIN VARIANT-1
Authors:Clore, G.M, Gronenborn, A.M.
Deposit date:1990-01-09
Release date:1990-01-15
Last modified:2017-11-29
Method:SOLUTION NMR
Cite:Solution structure of recombinant hirudin and the Lys-47----Glu mutant: a nuclear magnetic resonance and hybrid distance geometry-dynamical simulated annealing study.
Biochemistry, 28, 1989
6X63
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BU of 6x63 by Molmil
Atomic-Resolution Structure of HIV-1 Capsid Tubes by Magic Angle Spinning NMR
Descriptor: HIV-1 capsid protein
Authors:Lu, M, Russell, R.W, Bryer, A, Quinn, C.M, Hou, G, Zhang, H, Schwieters, C.D, Perilla, J.R, Gronenborn, A.M, Polenova, T.
Deposit date:2020-05-27
Release date:2020-09-02
Last modified:2024-05-15
Method:SOLID-STATE NMR
Cite:Atomic-resolution structure of HIV-1 capsid tubes by magic-angle spinning NMR.
Nat.Struct.Mol.Biol., 27, 2020
6XQJ
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BU of 6xqj by Molmil
Structure of HIV-1 Vpr in complex with the human nucleotide excision repair protein hHR23A
Descriptor: Protein Vpr,UV excision repair protein RAD23 homolog A, ZINC ION
Authors:Byeon, I.-J.L, Calero, G, Wu, Y, Byeon, C.H, Gronenborn, A.M.
Deposit date:2020-07-09
Release date:2021-11-17
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:Structure of HIV-1 Vpr in complex with the human nucleotide excision repair protein hHR23A.
Nat Commun, 12, 2021
7R7Q
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BU of 7r7q by Molmil
Immature HIV-1 CACTD-SP1 lattice with Inositol hexakisphosphate (IP6)
Descriptor: Gag polyprotein, INOSITOL HEXAKISPHOSPHATE
Authors:Sarkar, S, Zadrozny, K.K, Zadorozhnyi, R, Russell, R.W, Quinn, C.M, Kleinpeter, A, Ablan, S, Meshkin, H, Perilla, J.R, Ganser-Pornillos, B.K, Pornillos, O, Freed, E.O, Gronenborn, A.M, Polenova, T.
Deposit date:2021-06-25
Release date:2023-02-15
Last modified:2024-05-15
Method:SOLID-STATE NMR
Cite:Structural basis of HIV-1 maturation inhibitor binding and activity.
Nat Commun, 14, 2023
7R7P
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BU of 7r7p by Molmil
Immature HIV-1 CACTD-SP1 lattice with Bevirimat (BVM) and Inositol hexakisphosphate (IP6)
Descriptor: 3alpha-[(3-carboxy-3-methylbutanoyl)oxy]-8alpha,9beta,10alpha,13alpha,17alpha,19beta-lup-20(29)-en-28-oic acid, Gag polyprotein, INOSITOL HEXAKISPHOSPHATE
Authors:Sarkar, S, Zadrozny, K.K, Zadorozhnyi, R, Russell, R.W, Quinn, C.M, Kleinpeter, A, Ablan, S, Meshkin, H, Perilla, J.R, Ganser-Pornillos, B.K, Pornillos, O, Freed, E.O, Gronenborn, A.M, Polenova, T.
Deposit date:2021-06-25
Release date:2023-02-15
Last modified:2024-05-15
Method:SOLID-STATE NMR
Cite:Structural basis of HIV-1 maturation inhibitor binding and activity.
Nat Commun, 14, 2023
6WCY
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BU of 6wcy by Molmil
N160D Deamidation Mutant of Human gammaD-Crystallin
Descriptor: Gamma-crystallin D, SULFATE ION
Authors:Whitley, M.J, Rathi, N, Ambarian, M, Gronenborn, A.M.
Deposit date:2020-03-31
Release date:2021-01-20
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.204 Å)
Cite:Assessing the Structures and Interactions of gamma D-Crystallin Deamidation Variants.
Structure, 29, 2021
3LHC
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BU of 3lhc by Molmil
Crystal structure of cyanovirin-n swapping domain b mutant
Descriptor: Cyanovirin-N, PHOSPHATE ION, SODIUM ION
Authors:Matei, E, Zheng, A, Furey, W, Rose, J, Aiken, C, Gronenborn, A.M.
Deposit date:2010-01-21
Release date:2010-02-09
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.34 Å)
Cite:Anti-HIV activity of defective cyanovirin-N mutants is restored by dimerization.
J.Biol.Chem., 285, 2010
5K79
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BU of 5k79 by Molmil
Structure and anti-HIV activity of CYT-CVNH, a new cyanovirin-n homolog
Descriptor: 1,2-ETHANEDIOL, Cyanovirin-N domain protein, DI(HYDROXYETHYL)ETHER
Authors:Matei, E, Basu, R, Furey, W, Shi, J, Calnan, C, Aiken, C, Gronenborn, A.M.
Deposit date:2016-05-25
Release date:2016-07-20
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structure and Glycan Binding of a New Cyanovirin-N Homolog.
J.Biol.Chem., 291, 2016
3OBL
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BU of 3obl by Molmil
Crystal structure of the potent anti-HIV cyanobacterial lectin from Oscillatoria Agardhii
Descriptor: 3-CYCLOHEXYL-1-PROPYLSULFONIC ACID, Lectin
Authors:Koharudin, L.M.I, Furey, W, Gronenborn, A.M.
Deposit date:2010-08-06
Release date:2010-10-20
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Novel fold and carbohydrate specificity of the potent anti-HIV cyanobacterial lectin from Oscillatoria agardhii.
J.Biol.Chem., 286, 2011
4Z8L
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BU of 4z8l by Molmil
Crystal structure of DCAF1/SIV-MND VPX/MND SAMHD1 NTD ternary complex
Descriptor: Protein VPRBP, SAM domain and HD domain-containing protein, Vpx protein, ...
Authors:Koharudin, L.M, Wu, Y, Calero, G, Ahn, J, Gronenborn, A.M.
Deposit date:2015-04-09
Release date:2015-06-17
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural Basis of Clade-specific Engagement of SAMHD1 (Sterile alpha Motif and Histidine/Aspartate-containing Protein 1) Restriction Factors by Lentiviral Viral Protein X (Vpx) Virulence Factors.
J.Biol.Chem., 290, 2015
6WAP
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BU of 6wap by Molmil
Atomic-Resolution Structure of HIV-1 Capsid Tubes by Magic Angle Spinning NMR
Descriptor: HIV-1 capsid protein
Authors:Lu, M, Russell, R.W, Bryer, A, Quinn, C.M, Hou, G, Zhang, H, Schwieters, C.D, Perilla, J.R, Gronenborn, A.M, Polenova, T.
Deposit date:2020-03-25
Release date:2020-09-02
Last modified:2024-05-15
Method:SOLID-STATE NMR
Cite:Atomic-resolution structure of HIV-1 capsid tubes by magic-angle spinning NMR.
Nat.Struct.Mol.Biol., 27, 2020
6W5B
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BU of 6w5b by Molmil
N124D Deamidation Mutant of Human gammaD-Crystallin
Descriptor: Gamma-crystallin D
Authors:Whitley, M.J, Rathi, N, Ambarian, M, Gronenborn, A.M.
Deposit date:2020-03-12
Release date:2021-01-20
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.15 Å)
Cite:Assessing the Structures and Interactions of gamma D-Crystallin Deamidation Variants.
Structure, 29, 2021
3EZB
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BU of 3ezb by Molmil
COMPLEX OF THE AMINO TERMINAL DOMAIN OF ENZYME I AND THE HISTIDINE-CONTAINING PHOSPHOCARRIER PROTEIN HPR FROM ESCHERICHIA COLI
Descriptor: PROTEIN (PHOSPHOCARRIER PROTEIN HPR), PROTEIN (PHOSPHOTRANSFER SYSTEM, ENZYME I)
Authors:Clore, G.M, Garrett, D.S, Gronenborn, A.M.
Deposit date:1998-11-03
Release date:1999-12-16
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:Solution structure of the 40,000 Mr phosphoryl transfer complex between the N-terminal domain of enzyme I and HPr.
Nat.Struct.Biol., 6, 1999
5C8O
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BU of 5c8o by Molmil
Crystal structure of MoCVNH3 variant (Mo0v)
Descriptor: MoCVNH3 variant
Authors:Koharudin, L.M.I, Gronenborn, A.M.
Deposit date:2015-06-25
Release date:2015-08-12
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.09 Å)
Cite:Structural Insight into Fungal Cell Wall Recognition by a CVNH Protein with a Single LysM Domain.
Structure, 23, 2015
5C8Q
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BU of 5c8q by Molmil
Crystal structure of MoCVNH3 variant (Mo0v) in complex with (N-GlcNAc)4
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, MoCVNH3 variant
Authors:Koharudin, L.M.I, Gronenborn, A.M.
Deposit date:2015-06-25
Release date:2015-08-12
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural Insight into Fungal Cell Wall Recognition by a CVNH Protein with a Single LysM Domain.
Structure, 23, 2015
3EZE
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BU of 3eze by Molmil
COMPLEX OF THE AMINO TERMINAL DOMAIN OF ENZYME I AND THE HISTIDINE-CONTAINING PHOSPHOCARRIER PROTEIN HPR FROM ESCHERICHIA COLI NMR, RESTRAINED REGULARIZED MEAN STRUCTURE
Descriptor: PHOSPHITE ION, PROTEIN (PHOSPHOTRANSFERASE SYSTEM, ENZYME I), ...
Authors:Clore, G.M, Garrett, D.S, Gronenborn, A.M.
Deposit date:1998-11-04
Release date:1998-12-16
Last modified:2023-12-27
Method:SOLUTION NMR
Cite:Solution structure of the 40,000 Mr phosphoryl transfer complex between the N-terminal domain of enzyme I and HPr.
Nat.Struct.Biol., 6, 1999
3EZA
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BU of 3eza by Molmil
COMPLEX OF THE AMINO TERMINAL DOMAIN OF ENZYME I AND THE HISTIDINE-CONTAINING PHOSPHOCARRIER PROTEIN HPR FROM ESCHERICHIA COLI NMR, RESTRAINED REGULARIZED MEAN STRUCTURE
Descriptor: HISTIDINE-CONTAINING PHOSPHOCARRIER PROTEIN HPR, PHOSPHOTRANSFERASE SYSTEM, ENZYME I
Authors:Clore, G.M, Garrett, D.S, Gronenborn, A.M.
Deposit date:1998-11-03
Release date:1999-05-25
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:Solution structure of the 40,000 Mr phosphoryl transfer complex between the N-terminal domain of enzyme I and HPr.
Nat.Struct.Biol., 6, 1999
5GAT
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BU of 5gat by Molmil
SOLUTION NMR STRUCTURE OF THE WILD TYPE DNA BINDING DOMAIN OF AREA COMPLEXED TO A 13BP DNA CONTAINING A CGATA SITE, 35 STRUCTURES
Descriptor: DNA (5'-D(*CP*AP*GP*CP*GP*AP*TP*AP*GP*AP*GP*AP*C)-3'), DNA (5'-D(*GP*TP*CP*TP*CP*TP*AP*TP*CP*GP*CP*TP*G)-3'), NITROGEN REGULATORY PROTEIN AREA, ...
Authors:Clore, G.M, Starich, M, Wikstrom, M, Gronenborn, A.M.
Deposit date:1997-11-07
Release date:1998-01-28
Last modified:2024-05-22
Method:SOLUTION NMR
Cite:The solution structure of a fungal AREA protein-DNA complex: an alternative binding mode for the basic carboxyl tail of GATA factors.
J.Mol.Biol., 277, 1998
5C8P
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BU of 5c8p by Molmil
Crystal structure of MoCVNH3 variant (Mo0v) in complex with (N-GlcNAc)3
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, MoCVNH3 variant
Authors:Koharudin, L.M.I, Gronenborn, A.M.
Deposit date:2015-06-25
Release date:2015-08-12
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural Insight into Fungal Cell Wall Recognition by a CVNH Protein with a Single LysM Domain.
Structure, 23, 2015
4BZB
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BU of 4bzb by Molmil
Crystal structure of the tetrameric dGTP-bound SAMHD1 mutant catalytic core
Descriptor: 2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE, DEOXYNUCLEOSIDE TRIPHOSPHATE TRIPHOSPHOHYDROLASE SAMHD1, MAGNESIUM ION
Authors:Ji, X, Yang, H, Wu, Y, Yan, J, Mehrens, J, DeLucia, M, Hao, C, Gronenborn, A.M, Skowronski, J, Ahn, J, Xiong, Y.
Deposit date:2013-07-25
Release date:2013-10-23
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.83 Å)
Cite:Mechanism of Allosteric Activation of Samhd1 by Dgtp
Nat.Struct.Mol.Biol., 20, 2013
5HDW
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BU of 5hdw by Molmil
ApaG Domain of FBxo3
Descriptor: F-box only protein 3
Authors:Krzysiak, T.C, Chen, B.B, Mallampalli, R.K, Gronenborn, A.M.
Deposit date:2016-01-05
Release date:2016-04-06
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure and interaction studies of the human FBxo3 ApaG domain.
Febs J., 283, 2016

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