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PDB: 638 results

3KEF
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BU of 3kef by Molmil
Crystal structure of IspH:DMAPP-complex
Descriptor: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase, DIMETHYLALLYL DIPHOSPHATE, FE3-S4 CLUSTER
Authors:Groll, M, Graewert, T, Span, I, Eisenreich, W, Bacher, A.
Deposit date:2009-10-26
Release date:2010-01-12
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Probing the reaction mechanism of IspH protein by x-ray structure analysis.
Proc.Natl.Acad.Sci.USA, 107, 2010
3KEM
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BU of 3kem by Molmil
Crystal structure of IspH:IPP complex
Descriptor: 3-METHYLBUT-3-ENYL TRIHYDROGEN DIPHOSPHATE, 4-hydroxy-3-methylbut-2-enyl diphosphate reductase, FE3-S4 CLUSTER
Authors:Groll, M, Graewert, T, Span, I, Eisenreich, W, Bacher, A.
Deposit date:2009-10-26
Release date:2010-01-12
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2 Å)
Cite:Probing the reaction mechanism of IspH protein by x-ray structure analysis.
Proc.Natl.Acad.Sci.USA, 107, 2010
3KE9
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BU of 3ke9 by Molmil
Crystal structure of IspH:Intermediate-complex
Descriptor: 3-METHYLBUT-3-ENYL TRIHYDROGEN DIPHOSPHATE, 4-hydroxy-3-methylbut-2-enyl diphosphate reductase, IRON/SULFUR CLUSTER
Authors:Groll, M, Graewert, T, Span, I, Eisenreich, W, Bacher, A.
Deposit date:2009-10-24
Release date:2010-01-12
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Probing the reaction mechanism of IspH protein by x-ray structure analysis.
Proc.Natl.Acad.Sci.USA, 107, 2010
3KEL
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BU of 3kel by Molmil
Crystal Structure of IspH:PP complex
Descriptor: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase, FE3-S4 CLUSTER, PYROPHOSPHATE 2-
Authors:Groll, M, Graewert, T, Span, I, Eisenreich, W, Bacher, A.
Deposit date:2009-10-26
Release date:2010-01-12
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Probing the reaction mechanism of IspH protein by x-ray structure analysis.
Proc.Natl.Acad.Sci.USA, 107, 2010
3KE8
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BU of 3ke8 by Molmil
Crystal structure of IspH:HMBPP-complex
Descriptor: 4-HYDROXY-3-METHYL BUTYL DIPHOSPHATE, 4-hydroxy-3-methylbut-2-enyl diphosphate reductase, IRON/SULFUR CLUSTER
Authors:Groll, M, Graewert, T, Span, I, Eisenreich, W, Bacher, A.
Deposit date:2009-10-24
Release date:2010-01-12
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Probing the reaction mechanism of IspH protein by x-ray structure analysis.
Proc.Natl.Acad.Sci.USA, 107, 2010
6EOZ
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BU of 6eoz by Molmil
Fe(II)/(alpha)ketoglutarate-dependent dioxygenase AsqJ_V72K mutant in complex with cyclopeptin (1b)
Descriptor: 2-OXOGLUTARIC ACID, Iron/alpha-ketoglutarate-dependent dioxygenase asqJ, NICKEL (II) ION, ...
Authors:Groll, M, Braeuer, A, Kaila, V.R.I.
Deposit date:2017-10-10
Release date:2018-04-04
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Catalytic mechanism and molecular engineering of quinolone biosynthesis in dioxygenase AsqJ.
Nat Commun, 9, 2018
1RYP
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BU of 1ryp by Molmil
CRYSTAL STRUCTURE OF THE 20S PROTEASOME FROM YEAST AT 2.4 ANGSTROMS RESOLUTION
Descriptor: 20S PROTEASOME, MAGNESIUM ION
Authors:Groll, M, Ditzel, L, Loewe, J, Stock, D, Bochtler, M, Bartunik, H.D, Huber, R.
Deposit date:1997-02-26
Release date:1998-04-15
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure of 20S proteasome from yeast at 2.4 A resolution.
Nature, 386, 1997
2R2Y
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BU of 2r2y by Molmil
Crystal structure of the proteasomal Rpn13 PRU-domain
Descriptor: Protein ADRM1
Authors:Groll, M, Walters, K, Dikic, I, Finley, D.
Deposit date:2007-08-28
Release date:2008-05-13
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Ubiquitin docking at the proteasome through a novel pleckstrin-homology domain interaction.
Nature, 453, 2008
6Y36
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BU of 6y36 by Molmil
CCAAT-binding complex from Aspergillus fumigatus with cccA DNA
Descriptor: CCAAT-binding factor complex subunit HapC, CCAAT-binding factor complex subunit HapE, CCAAT-binding transcription factor subunit HAPB, ...
Authors:Groll, M, Huber, E.M.
Deposit date:2020-02-17
Release date:2020-05-27
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural basis of HapE P88L -linked antifungal triazole resistance in Aspergillus fumigatus .
Life Sci Alliance, 3, 2020
6Y37
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BU of 6y37 by Molmil
CCAAT-binding complex from Aspergillus nidulans with cccA DNA
Descriptor: CBFD_NFYB_HMF domain-containing protein, DNA (25-MER), GLYCEROL, ...
Authors:Groll, M, Huber, E.M.
Deposit date:2020-02-17
Release date:2020-05-27
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural basis of HapE P88L -linked antifungal triazole resistance in Aspergillus fumigatus .
Life Sci Alliance, 3, 2020
6Y35
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BU of 6y35 by Molmil
CCAAT-binding complex from Aspergillus fumigatus with cycA DNA
Descriptor: CCAAT-binding factor complex subunit HapC, CCAAT-binding factor complex subunit HapE, CCAAT-binding transcription factor subunit HAPB, ...
Authors:Groll, M, Huber, E.M.
Deposit date:2020-02-17
Release date:2020-05-27
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural basis of HapE P88L -linked antifungal triazole resistance in Aspergillus fumigatus .
Life Sci Alliance, 3, 2020
6Y39
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BU of 6y39 by Molmil
HapE-P88L mutant CCAAT-binding complex from Aspergillus nidulans with cycA DNA
Descriptor: CBFD_NFYB_HMF domain-containing protein, CHLORIDE ION, DNA (25 mer), ...
Authors:Groll, M, Huber, E.M.
Deposit date:2020-02-17
Release date:2020-05-27
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural basis of HapE P88L -linked antifungal triazole resistance in Aspergillus fumigatus .
Life Sci Alliance, 3, 2020
2GPL
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BU of 2gpl by Molmil
TMC-95 based biphenyl-ether macrocycles: specific proteasome inhibitors
Descriptor: BENZYL [12-(2-AMINO-2-OXOETHYL)-4-NITRO-10,13-DIOXO-15-[(PROPYLAMINO)CARBONYL]-2-OXA-11,14-DIAZATRICYCLO[15 .2.2.1~3,7~]DOCOSA-1(19),3(22),4,6,17,20-HEXAEN-9-YL]CARBAMATE, Proteasome component C1, Proteasome component C11, ...
Authors:Groll, M, Goetz, M, Kaiser, M, Weyher, E, Moroder, M.
Deposit date:2006-04-18
Release date:2006-07-11
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.81 Å)
Cite:TMC-95-Based Inhibitor Design Provides Evidence for the Catalytic Versatility of the Proteasome.
Chem.Biol., 13, 2006
3NZW
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BU of 3nzw by Molmil
Crystal structure of the yeast 20S proteasome in complex with 2b
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Proteasome component C1, Proteasome component C11, ...
Authors:Groll, M, Gallastegui, N, Marechal, X, Le Ravalec, V, Basse, N, Richy, N, Genin, E, Huber, R, Moroder, M, Vidal, V, Reboud-Ravaux, M.
Deposit date:2010-07-17
Release date:2011-02-16
Last modified:2023-12-06
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:20S proteasome inhibition: designing noncovalent linear peptide mimics of the natural product TMC-95A.
Chemmedchem, 5, 2010
3NZJ
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BU of 3nzj by Molmil
Crystal structure of yeast 20S proteasome in complex with ligand 2a
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, Proteasome component C1, Proteasome component C11, ...
Authors:Groll, M, Gallastegui, N, Marechal, X, Le Ravalec, V, Basse, N, Richy, N, Genin, E, Huber, R, Moroder, M, Vidal, V, Reboud-Ravaux, M.
Deposit date:2010-07-16
Release date:2011-02-16
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:20S proteasome inhibition: designing noncovalent linear peptide mimics of the natural product TMC-95A.
Chemmedchem, 5, 2010
3GPJ
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BU of 3gpj by Molmil
Crystal structure of the yeast 20S proteasome in complex with syringolin B
Descriptor: N-{[(1S)-2-methyl-1-{[(5S,8S)-5-(1-methylethyl)-2,7-dioxo-1,6-diazacyclododec-3-en-8-yl]carbamoyl}propyl]carbamoyl}-L-valine, Proteasome component C1, Proteasome component C11, ...
Authors:Groll, M, Huber, R, Kaiser, M.
Deposit date:2009-03-23
Release date:2009-06-02
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Synthetic and structural studies on syringolin A and B reveal critical determinants of selectivity and potency of proteasome inhibition
Proc.Natl.Acad.Sci.USA, 106, 2009
2ZCY
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BU of 2zcy by Molmil
yeast 20S proteasome:syringolin A-complex
Descriptor: (2S)-2-[[(2S)-1-[[(5S,8S,9E)-2,7-dioxo-5-propan-2-yl-1,6-diazacyclododeca-3,9-dien-8-yl]amino]-3-methyl-1-oxo-butan-2-yl]carbamoylamino]-3-methyl-butanoic acid, Proteasome component C1, Proteasome component C11, ...
Authors:Groll, M, Dudler, R, Kaiser, M.
Deposit date:2007-11-15
Release date:2008-04-08
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:A plant pathogen virulence factor inhibits the eukaryotic proteasome by a novel mechanism
Nature, 452, 2008
3HYE
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BU of 3hye by Molmil
Crystal structure of 20S proteasome in complex with hydroxylated salinosporamide
Descriptor: (2R,3S,4R)-2-[(S)-(1S)-cyclohex-2-en-1-yl(hydroxy)methyl]-3-hydroxy-4-(2-hydroxyethyl)-3-methyl-5-oxopyrrolidine-2-carbaldehyde, Proteasome component C1, Proteasome component C11, ...
Authors:Groll, M, Arthur, K.A.M, Macherla, V.R, Manam, R.R, Potts, B.C.
Deposit date:2009-06-22
Release date:2009-09-15
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Snapshots of the fluorosalinosporamide/20S complex offer mechanistic insights for fine tuning proteasome inhibition
J.Med.Chem., 52, 2009
3MHP
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BU of 3mhp by Molmil
FNR-recruitment to the thylakoid
Descriptor: FLAVIN-ADENINE DINUCLEOTIDE, Ferredoxin--NADP reductase, leaf isozyme, ...
Authors:Groll, M, Alte, F, Soll, J, Boelter, B.
Deposit date:2010-04-08
Release date:2010-10-27
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Ferredoxin:NADPH oxidoreductase is recruited to thylakoids by binding to a polyproline type II helix in a pH-dependent manner.
Proc.Natl.Acad.Sci.USA, 107, 2010
3D29
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BU of 3d29 by Molmil
Proteasome Inhibition by Fellutamide B
Descriptor: (3R)-3-HYDROXYDODECANOIC ACID, Fellutamide B, PRE10 isoform 1, ...
Authors:Groll, M, Hines, J, Fahnestock, M, Crews, M.C.
Deposit date:2008-05-07
Release date:2008-06-10
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Proteasome Inhibition by Fellutamide B Induces Nerve Growth Factor Synthesis
Chem.Biol., 15, 2008
3GPT
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BU of 3gpt by Molmil
Crystal structure of the yeast 20S proteasome in complex with Salinosporamide derivatives: slow substrate ligand
Descriptor: (2R,3S,4R)-2-[(S)-(1S)-cyclohex-2-en-1-yl(hydroxy)methyl]-4-(2-fluoroethyl)-3-hydroxy-3-methyl-5-oxopyrrolidine-2-carbaldehyde, Proteasome component C1, Proteasome component C11, ...
Authors:Groll, M, Macherla, V.R, Manam, R.R, Arthur, K.A.M, Potts, C.B.
Deposit date:2009-03-23
Release date:2009-09-15
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.41 Å)
Cite:Snapshots of the fluorosalinosporamide/20S complex offer mechanistic insights for fine tuning proteasome inhibition
J.Med.Chem., 52, 2009
3GPW
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BU of 3gpw by Molmil
Crystal structure of the yeast 20S proteasome in complex with Salinosporamide derivatives: irreversible inhibitor ligand
Descriptor: (3AR,6R,6AS)-6-((S)-((S)-CYCLOHEX-2-ENYL)(HYDROXY)METHYL)-6A-METHYL-4-OXO-HEXAHYDRO-2H-FURO[3,2-C]PYRROLE-6-CARBALDEHYDE, Proteasome component C1, Proteasome component C11, ...
Authors:Groll, M, Macherla, V.R, Manam, R.R, Arthur, K.A.M, Potts, C.B.
Deposit date:2009-03-23
Release date:2009-09-15
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Snapshots of the fluorosalinosporamide/20S complex offer mechanistic insights for fine tuning proteasome inhibition
J.Med.Chem., 52, 2009
3BDM
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BU of 3bdm by Molmil
yeast 20S proteasome:glidobactin A-complex
Descriptor: (2E,4E)-N-[(2S,3R)-3-hydroxy-1-[[(3Z,5S,8S,10S)-10-hydroxy-5-methyl-2,7-dioxo-1,6-diazacyclododec-3-en-8-yl]amino]-1-ox obutan-2-yl]dodeca-2,4-dienamide, Proteasome component C1, Proteasome component C11, ...
Authors:Groll, M, Dudler, R, Kaiser, M.
Deposit date:2007-11-15
Release date:2008-04-08
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:A plant pathogen virulence factor inhibits the eukaryotic proteasome by a novel mechanism
Nature, 452, 2008
3OKJ
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BU of 3okj by Molmil
Alpha-keto-aldehyde binding mechanism reveals a novel lead structure motif for proteasome inhibition
Descriptor: N-[(benzyloxy)carbonyl]-L-leucyl-N-[(2S,3S)-3-hydroxy-1-(4-hydroxyphenyl)-4-oxobutan-2-yl]-L-leucinamide, Proteasome component C1, Proteasome component C11, ...
Authors:Groll, M, Poynor, M, Gallastegui, P, Stein, M, Schmidt, B, Kloetzel, P.M, Huber, R.
Deposit date:2010-08-25
Release date:2011-06-08
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Elucidation of the alpha-keto-aldehyde binding mechanism: a lead structure motif for proteasome inhibition
Angew.Chem.Int.Ed.Engl., 50, 2011
3DY3
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BU of 3dy3 by Molmil
Crystal structure of yeast 20S proteasome in complex with the epimer form of spirolactacystin
Descriptor: (3R,4R)-3-hydroxy-2-[(1S)-1-hydroxy-2-methylpropyl]-4-methyl-5-oxo-D-proline, Proteasome component C1, Proteasome component C11, ...
Authors:Groll, M, Balskus, E, Jacobsen, E.
Deposit date:2008-07-25
Release date:2008-11-04
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2.81 Å)
Cite:Structural analysis of spiro beta-lactone proteasome inhibitors.
J.Am.Chem.Soc., 130, 2008

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