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PDB: 219 results

4ALA
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BU of 4ala by Molmil
Structure of Dengue virus DIII in complex with Fab 2H12
Descriptor: ENVELOPE PROTEIN, FAB 2H12 HEAVY CHAIN, FAB 2H12 LIGHT CHAIN, ...
Authors:Midgley, C.M, Flanagan, A, Mongkolsapaya, J, Grimes, J.M, Screaton, G.R.
Deposit date:2012-03-02
Release date:2012-06-06
Method:X-RAY DIFFRACTION (1.84 Å)
Cite:Structural Analysis of a Dengue Cross-Reactive Antibody Complexed with Envelope Domain III Reveals the Molecular Basis of Cross-Reactivity.
J.Immunol., 188, 2012
2VVD
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BU of 2vvd by Molmil
Crystal structure of the receptor binding domain of the spike protein P1 from bacteriophage PM2
Descriptor: CALCIUM ION, SPIKE PROTEIN P1
Authors:Abrescia, N.G.A, Grimes, J.M, Kivela, H.K, Assenberg, R, Sutton, G.C, Butcher, S.J, Bamford, J.K.H, Bamford, D.H, Stuart, D.I.
Deposit date:2008-06-06
Release date:2008-09-16
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.26 Å)
Cite:Insights Into Virus Evolution and Membrane Biogenesis from the Structure of the Marine Lipid-Containing Bacteriophage Pm2.
Mol.Cell, 31, 2008
4AM0
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BU of 4am0 by Molmil
Structure of Dengue virus strain 4 DIII in complex with Fab 2H12
Descriptor: ENVELOPE PROTEIN,, FAB 2H12, HEAVY CHAIN, ...
Authors:Midgley, C.M, Flanagan, A, Mongkolsapaya, J, Grimes, J.M, Screaton, G.R.
Deposit date:2012-03-06
Release date:2012-06-06
Last modified:2019-12-04
Method:X-RAY DIFFRACTION (3.02 Å)
Cite:Structural Analysis of a Dengue Cross-Reactive Antibody Complexed with Envelope Domain III Reveals the Molecular Basis of Cross-Reactivity.
J.Immunol., 188, 2012
3V6F
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Crystal Structure of an anti-HBV e-antigen monoclonal Fab fragment (e6), unbound
Descriptor: Fab e6 Heavy Chain, Fab e6 Light Chain
Authors:Dimattia, M.A, Watts, N.R, Stahl, S.J, Grimes, J.M, Steven, A.C, Stuart, D.I, Wingfield, P.T.
Deposit date:2011-12-19
Release date:2013-02-06
Method:X-RAY DIFFRACTION (2.52 Å)
Cite:Antigenic switching of hepatitis B virus by alternative dimerization of the capsid protein.
Structure, 21, 2013
4CDQ
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BU of 4cdq by Molmil
Crystal structure of human Enterovirus 71 in complex with the uncoating inhibitor GPP2
Descriptor: 4-((5-(2-oxo-3-(pyridin-4-yl)imidazolidin-1-yl)pentyl)oxy)benzaldehyde O-ethyl oxime, SODIUM ION, VP1, ...
Authors:DeColibus, L, Wang, X, Spyrou, J.A.B, Kelly, J, Ren, J, Grimes, J, Puerstinger, G, Stonehouse, N, Walter, T.S, Hu, Z, Wang, J, Li, X, Peng, W, Rowlands, D, Fry, E.E, Rao, Z, Stuart, D.I.
Deposit date:2013-11-05
Release date:2014-02-12
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.65 Å)
Cite:More-Powerful Virus Inhibitors from Structure-Based Analysis of Hev71 Capsid-Binding Molecules
Nat.Struct.Mol.Biol., 21, 2014
4CDX
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BU of 4cdx by Molmil
Crystal structure of human Enterovirus 71 in complex with the uncoating inhibitor GPP12
Descriptor: 1-(5-((3'-METHYL-[1,1'-BIPHENYL]-4-YL)OXY)PENTYL)-3-(, SODIUM ION, VP1, ...
Authors:De Colibus, L, Wang, X, Spyrou, J.A.B, Kelly, J, Ren, J, Grimes, J, Puerstinger, G, Stonehouse, N, Walter, T.S, Hu, Z, Wang, J, Li, X, Peng, W, Rowlands, D, Fry, E.E, Rao, Z, Stuart, D.I.
Deposit date:2013-11-07
Release date:2014-02-12
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:More-Powerful Virus Inhibitors from Structure-Based Analysis of Hev71 Capsid-Binding Molecules.
Nat.Struct.Mol.Biol., 21, 2014
4CEY
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Crystal structure of human Enterovirus 71 in complex with the uncoating inhibitor NLD
Descriptor: 1-(2-aminopyridin-4-yl)-3-[(3S)-5-{4-[(E)-(ethoxyimino)methyl]phenoxy}-3-methylpentyl]imidazolidin-2-one, SODIUM ION, VP1, ...
Authors:De Colibus, L, Wang, X, Spyrou, J.A.B, Kelly, J, Ren, J, Grimes, J, Puerstinger, G, Stonehouse, N, Walter, T.S, Hu, Z, Wang, J, Li, X, Peng, W, Rowlands, D, Fry, E.E, Rao, Z, Stuart, D.I.
Deposit date:2013-11-12
Release date:2014-02-12
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:More-Powerful Virus Inhibitors from Structure-Based Analysis of Hev71 Capsid-Binding Molecules
Nat.Struct.Mol.Biol., 21, 2014
4CDW
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BU of 4cdw by Molmil
Crystal structure of human Enterovirus 71 in complex with the uncoating inhibitor GPP4
Descriptor: 1-[(3S)-5-(4-iodanylphenoxy)-3-methyl-pentyl]-3-pyridin-4-yl-imidazolidin-2-one, SODIUM ION, VP1, ...
Authors:De Colibus, L, Wang, X, Spyrou, J.A.B, Kelly, J, Ren, J, Grimes, J, Puerstinger, G, Stonehouse, N, Walter, T.S, Hu, Z, Wang, J, Li, X, Peng, W, Rowlands, D, Fry, E.E, Rao, Z, Stuart, D.I.
Deposit date:2013-11-06
Release date:2014-02-12
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:More-Powerful Virus Inhibitors from Structure-Based Analysis of Hev71 Capsid-Binding Molecules
Nat.Struct.Mol.Biol., 21, 2014
2VGA
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BU of 2vga by Molmil
The structure of Vaccinia virus A41
Descriptor: PROTEIN A41
Authors:Bahar, M.W, Kenyon, J.C, Putz, M.M, Abrescia, N.G.A, Pease, J.E, Wise, E.L, Stuart, D.I, Smith, G.L, Grimes, J.M.
Deposit date:2007-11-09
Release date:2008-02-26
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure and Function of A41, a Vaccinia Virus Chemokine Binding Protein.
Plos Pathog., 4, 2008
2VVW
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BU of 2vvw by Molmil
Structure of Vaccinia virus protein A52
Descriptor: PROTEIN A52
Authors:Graham, S.C, Bahar, M.W, Cooray, S, Chen, R.A.-J, Whalen, D.M, Abrescia, N.G.A, Alderton, D, Owens, R.J, Stuart, D.I, Smith, G.L, Grimes, J.M.
Deposit date:2008-06-12
Release date:2008-08-26
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Vaccinia Virus Proteins A52 and B14 Share a Bcl-2-Like Fold But Have Evolved to Inhibit NF-kappaB Rather Than Apoptosis
Plos Pathog., 4, 2008
2VVX
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BU of 2vvx by Molmil
Structure of Vaccinia virus protein A52
Descriptor: PROTEIN A52
Authors:Graham, S.C, Bahar, M.W, Cooray, S, Chen, R.A.-J, Whalen, D.M, Abrescia, N.G.A, Alderton, D, Owens, R.J, Stuart, D.I, Smith, G.L, Grimes, J.M.
Deposit date:2008-06-12
Release date:2008-08-26
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.746 Å)
Cite:Vaccinia Virus Proteins A52 and B14 Share a Bcl-2-Like Fold But Have Evolved to Inhibit NF-kappaB Rather Than Apoptosis
Plos Pathog., 4, 2008
2UXE
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BU of 2uxe by Molmil
The structure of Vaccinia virus N1
Descriptor: HYPOTHETICAL PROTEIN
Authors:Cooray, S, Bahar, M.W, Abrescia, N.G.A, McVey, C.E, Bartlett, N.W, Chen, R.A.-J, Stuart, D.I, Grimes, J.M, Smith, G.L.
Deposit date:2007-03-28
Release date:2007-05-22
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Functional and Structural Studies of the Vaccinia Virus Virulence Factor N1 Reveal a Bcl-2-Like Anti- Apoptotic Protein
J.Gen.Virol., 88, 2007
2WFO
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BU of 2wfo by Molmil
Crystal structure of Machupo virus envelope glycoprotein GP1
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, GLYCOPROTEIN 1
Authors:Bowden, T.A, Crispin, M, Graham, S.C, Harvey, D.J, Grimes, J.M, Jones, E.Y, Stuart, D.I.
Deposit date:2009-04-09
Release date:2009-06-16
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (1.73 Å)
Cite:Unusual Molecular Architecture of the Machupo Virus Attachment Glycoprotein.
J.Virol., 83, 2009
3ZN5
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BU of 3zn5 by Molmil
VP16, a capsid protein of bacteriophage P23-77 (VP16-virus-derived)
Descriptor: CHLORIDE ION, VP16
Authors:Rissanen, I, Grimes, J.M, Pawlowski, A, Mantynen, S, Harlos, K, Bamford, J.K.H, Stuart, D.I.
Deposit date:2013-02-13
Release date:2013-05-15
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.36 Å)
Cite:Bacteriophage P23-77 Capsid Protein Structures Reveal the Archetype of an Ancient Branch from a Major Virus Lineage.
Structure, 21, 2013
2JLG
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BU of 2jlg by Molmil
STRUCTURAL EXPLANATION FOR THE ROLE OF MN IN THE ACTIVITY OF PHI6 RNA-DEPENDENT RNA POLYMERASE
Descriptor: 5'-D(*DT DT DT DC DCP)-3', GUANOSINE-5'-TRIPHOSPHATE, MANGANESE (II) ION, ...
Authors:Poranen, M.M, Salgado, P.S, Koivunen, M.R.L, Wright, S, Bamford, D.H, Stuart, D.I, Grimes, J.M.
Deposit date:2008-09-09
Release date:2008-11-04
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structural Explanation for the Role of Mn2+ in the Activity of {Phi}6 RNA-Dependent RNA Polymerase.
Nucleic Acids Res., 36, 2008
2YIB
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BU of 2yib by Molmil
Structure of the RNA polymerase VP1 from Infectious Pancreatic Necrosis Virus
Descriptor: RNA-DIRECTED RNA POLYMERASE
Authors:Graham, S.C, Sarin, L.P, Bahar, M.W, Myers, R.A, Stuart, D.I, Bamford, D.H, Grimes, J.M.
Deposit date:2011-05-11
Release date:2011-07-20
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (3.8 Å)
Cite:The N-Terminus of the RNA Polymerase from Infectious Pancreatic Necrosis Virus is the Determinant of Genome Attachment.
Plos Pathog., 7, 2011
2V8O
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BU of 2v8o by Molmil
Structure of the Murray Valley encephalitis virus RNA helicase to 1. 9A resolution
Descriptor: FLAVIVIRIN PROTEASE NS3
Authors:Mancini, E.J, Assenberg, R, Verma, A, Walter, T.S, Tuma, R, Grimes, J.M, Owens, R.J, Stuart, D.I.
Deposit date:2007-08-09
Release date:2007-08-21
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure of the Murray Valley Encephalitis Virus RNA Helicase at 1.9 A Resolution.
Protein Sci., 16, 2007
2VVY
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BU of 2vvy by Molmil
Structure of Vaccinia virus protein B14
Descriptor: PROTEIN B15
Authors:Graham, S.C, Bahar, M.W, Cooray, S, Chen, R.A.-J, Whalen, D.M, Abrescia, N.G.A, Alderton, D, Owens, R.J, Stuart, D.I, Smith, G.L, Grimes, J.M.
Deposit date:2008-06-12
Release date:2008-08-26
Last modified:2019-05-08
Method:X-RAY DIFFRACTION (2.693 Å)
Cite:Vaccinia Virus Proteins A52 and B14 Share a Bcl-2-Like Fold But Have Evolved to Inhibit NF-kappaB Rather Than Apoptosis
Plos Pathog., 4, 2008
4CDU
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BU of 4cdu by Molmil
Crystal structure of human Enterovirus 71 in complex with the uncoating inhibitor GPP3
Descriptor: 1-[(3S)-5-[4-[(E)-ETHOXYIMINOMETHYL]PHENOXY]-3-METHYL-PENTYL]-3-PYRIDIN-4-YL-IMIDAZOLIDIN-2-ONE, CHLORIDE ION, SODIUM ION, ...
Authors:De Colibus, L, Wang, X, Spyrou, J.A.B, Kelly, J, Ren, J, Grimes, J, Puerstinger, G, Stonehouse, N, Walter, T.S, Hu, Z, Wang, J, Li, X, Peng, W, Rowlands, D, Fry, E.E, Rao, Z, Stuart, D.I.
Deposit date:2013-11-06
Release date:2014-02-12
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:More-Powerful Virus Inhibitors from Structure-Based Analysis of Hev71 Capsid-Binding Molecules
Nat.Struct.Mol.Biol., 21, 2014
4AL8
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BU of 4al8 by Molmil
Structure of Dengue virus DIII in complex with Fab 2H12
Descriptor: ENVELOPE PROTEIN, FAB 2H12 HEAVY CHAIN, FAB 2H12 LIGHT CHAIN, ...
Authors:Midgley, C.M, Flanagan, A, Mongkolsapaya, J, Grimes, J.M, Screaton, G.R.
Deposit date:2012-03-02
Release date:2012-06-06
Method:X-RAY DIFFRACTION (1.66 Å)
Cite:Structural Analysis of a Dengue Cross-Reactive Antibody Complexed with Envelope Domain III Reveals the Molecular Basis of Cross-Reactivity.
J.Immunol., 188, 2012
2WZL
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BU of 2wzl by Molmil
The Structure of the N-RNA Binding Domain of the Mokola virus Phosphoprotein
Descriptor: GLYCEROL, PHOSPHOPROTEIN
Authors:Assenberg, R, Delmas, O, Ren, J, Vidalain, P, Verma, A, Larrous, F, Graham, S, Tangy, F, Grimes, J, Bourhy, H.
Deposit date:2009-11-30
Release date:2009-12-15
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:The Structure of the N-RNA Binding Domain of the Mokola Virus Phosphoprotein
J.Virol., 84, 2010
4CEW
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BU of 4cew by Molmil
Crystal structure of human Enterovirus 71 in complex with the uncoating inhibitor ALD
Descriptor: 4-[3-[(3s)-5-[4-[(e)-ethoxyiminomethyl]phenoxy]-3-methyl-pentyl]-2-oxidanylidene-imidazolidin-1-yl]pyridine-2-carboxamide, VP1, VP2, ...
Authors:De Colibus, L, Wang, X, Spyrou, J.A.B, Kelly, J, Ren, J, Grimes, J, Puerstinger, G, Stonehouse, N, Walter, T.S, Hu, Z, Wang, J, Li, X, Peng, W, Rowlands, D, Fry, E.E, Rao, Z, Stuart, D.I.
Deposit date:2013-11-12
Release date:2014-02-12
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:More-Powerful Virus Inhibitors from Structure-Based Analysis of Hev71 Capsid-Binding Molecules.
Nat.Struct.Mol.Biol., 21, 2014
3ZMN
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BU of 3zmn by Molmil
VP17, a capsid protein of bacteriophage P23-77
Descriptor: VP17
Authors:Rissanen, I, Grimes, J.M, Pawlowski, A, Mantynen, S, Harlos, K, Bamford, J.K.H, Stuart, D.I.
Deposit date:2013-02-11
Release date:2013-05-15
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.26 Å)
Cite:Bacteriophage P23-77 Capsid Protein Structures Reveal the Archetype of an Ancient Branch from a Major Virus Lineage.
Structure, 21, 2013
3ZN4
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BU of 3zn4 by Molmil
VP16, a capsid protein of bacteriophage P23-77 (VP16-type-2)
Descriptor: CHLORIDE ION, CITRIC ACID, VP16
Authors:Rissanen, I, Grimes, J.M, Pawlowski, A, Mantynen, S, Harlos, K, Bamford, J.K.H, Stuart, D.I.
Deposit date:2013-02-13
Release date:2013-05-15
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.26 Å)
Cite:Bacteriophage P23-77 Capsid Protein Structures Reveal the Archetype of an Ancient Branch from a Major Virus Lineage.
Structure, 21, 2013
4A8Y
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BU of 4a8y by Molmil
Non-Catalytic Ions Direct the RNA-Dependent RNA Polymerase of Bacterial dsRNA virus phi6 from De Novo Initiation to Elongation
Descriptor: 5'-D(*TP*TP*TP*TP*CP*GP*CP*GP*TP*AP*AP*GP*CP*GP)-3', ADENOSINE-5'-TRIPHOSPHATE, MAGNESIUM ION, ...
Authors:Wright, S, Poranen, M.M, Bamford, D.H, Stuart, D.I, Grimes, J.M.
Deposit date:2011-11-21
Release date:2012-07-04
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (3.41 Å)
Cite:Noncatalytic Ions Direct the RNA-Dependent RNA Polymerase of Bacterial Double-Stranded RNA Virus Phi6 from De Novo Initiation to Elongation.
J.Virol., 86, 2012

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