Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 110 results

8ANE
DownloadVisualize
BU of 8ane by Molmil
Structure of the type I-G CRISPR effector
Descriptor: Cas7, RNA (66-MER)
Authors:Shangguan, Q, Graham, S, Sundaramoorthy, R, White, M.F.
Deposit date:2022-08-05
Release date:2022-11-09
Last modified:2024-07-24
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Structure and mechanism of the type I-G CRISPR effector.
Nucleic Acids Res., 50, 2022
7NBV
DownloadVisualize
BU of 7nbv by Molmil
Structure of 2A protein from Theilers murine encephalomyelitis virus (TMEV)
Descriptor: BROMIDE ION, Capsid protein VP0
Authors:Hill, C.H, Cook, G.M, Napthine, S, Kibe, A, Brown, K, Caliskan, N, Firth, A.E, Graham, S.C, Brierley, I.
Deposit date:2021-01-28
Release date:2021-12-08
Last modified:2024-06-19
Method:X-RAY DIFFRACTION (1.87 Å)
Cite:Investigating molecular mechanisms of 2A-stimulated ribosomal pausing and frameshifting in Theilovirus.
Nucleic Acids Res., 49, 2021
6YUD
DownloadVisualize
BU of 6yud by Molmil
Structure of Csx3/Crn3 from Archaeoglobus fulgidus in complex with cyclic tetra-adenylate (cA4)
Descriptor: Cyclic tetraadenosine monophosphate (cA4), Uncharacterized protein AF_1864
Authors:McQuarrie, S, Gloster, T.M, White, M.F, Graham, S, Athukoralage, J.S, Gruschow, S.
Deposit date:2020-04-27
Release date:2020-08-19
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.84 Å)
Cite:Tetramerisation of the CRISPR ring nuclease Crn3/Csx3 facilitates cyclic oligoadenylate cleavage.
Elife, 9, 2020
7NWT
DownloadVisualize
BU of 7nwt by Molmil
Initiated 70S ribosome in complex with 2A protein from encephalomyocarditis virus (EMCV)
Descriptor: 16S ribosomal RNA, 23S ribosomal RNA, 30S ribosomal protein S10, ...
Authors:Hill, C.H, Napthine, S, Pekarek, L, Kibe, A, Firth, A.E, Graham, S.C, Caliskan, N, Brierley, I.
Deposit date:2021-03-17
Release date:2021-12-15
Last modified:2024-04-24
Method:ELECTRON MICROSCOPY (2.66 Å)
Cite:Structural and molecular basis for Cardiovirus 2A protein as a viral gene expression switch
Nat Commun, 12, 2021
3ZR5
DownloadVisualize
BU of 3zr5 by Molmil
STRUCTURE OF GALACTOCEREBROSIDASE FROM MOUSE
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
Authors:Deane, J.E, Graham, S.C, Kim, N.N, Stein, P.E, Mcnair, R, Cachon-Gonzalez, M.B, Cox, T.M, Read, R.J.
Deposit date:2011-06-14
Release date:2011-09-28
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Insights Into Krabbe Disease from Structures of Galactocerebrosidase.
Proc.Natl.Acad.Sci.USA, 108, 2011
3ZR6
DownloadVisualize
BU of 3zr6 by Molmil
STRUCTURE OF GALACTOCEREBROSIDASE FROM MOUSE IN COMPLEX WITH GALACTOSE
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ...
Authors:Deane, J.E, Graham, S.C, Kim, N.N, Stein, P.E, Mcnair, R, Cachon-Gonzalez, M.B, Cox, T.M, Read, R.J.
Deposit date:2011-06-14
Release date:2011-09-28
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.44 Å)
Cite:Insights Into Krabbe Disease from Structures of Galactocerebrosidase.
Proc.Natl.Acad.Sci.USA, 108, 2011
6I2M
DownloadVisualize
BU of 6i2m by Molmil
Crystal structure of vaccinia virus protein A55 BTB-Back domain in complex with human Cullin-3 N-terminus
Descriptor: Cullin-3, Kelch repeat and BTB domain-containing protein A55
Authors:Gao, G, Graham, S.C.
Deposit date:2018-11-01
Release date:2019-01-23
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Molecular basis of cullin-3 (Cul3) ubiquitin ligase subversion by vaccinia virus protein A55.
J.Biol.Chem., 294, 2019
8A16
DownloadVisualize
BU of 8a16 by Molmil
Human PTPRM domains FN3-4, in spacegroup P212121
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, Receptor-type tyrosine-protein phosphatase mu, beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose
Authors:Caroe, E, Graham, S.C, Sharpe, H.J, Deane, J.E.
Deposit date:2022-05-31
Release date:2023-03-15
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.89 Å)
Cite:Determinants of receptor tyrosine phosphatase homophilic adhesion: Structural comparison of PTPRK and PTPRM extracellular domains.
J.Biol.Chem., 299, 2023
8A1F
DownloadVisualize
BU of 8a1f by Molmil
Human PTPRK N-terminal domains MAM-Ig-FN1
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Hay, I.M, Graham, S.C, Sharpe, H.J, Deane, J.E.
Deposit date:2022-06-01
Release date:2023-03-15
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (3 Å)
Cite:Determinants of receptor tyrosine phosphatase homophilic adhesion: Structural comparison of PTPRK and PTPRM extracellular domains.
J.Biol.Chem., 299, 2023
8A17
DownloadVisualize
BU of 8a17 by Molmil
Human PTPRM domains FN3-4, in spacegroup P3221
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, Receptor-type tyrosine-protein phosphatase mu, ...
Authors:Shamin, M, Graham, S.C, Sharpe, H.J, Deane, J.E.
Deposit date:2022-05-31
Release date:2023-03-15
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (3.09 Å)
Cite:Determinants of receptor tyrosine phosphatase homophilic adhesion: Structural comparison of PTPRK and PTPRM extracellular domains.
J.Biol.Chem., 299, 2023
6SCF
DownloadVisualize
BU of 6scf by Molmil
A viral anti-CRISPR subverts type III CRISPR immunity by rapid degradation of cyclic oligoadenylate
Descriptor: Uncharacterized protein, cyclic oligoadenylate
Authors:McMahon, S.A, Athukoralage, J.S, Graham, S, White, M.F, Gloster, T.M.
Deposit date:2019-07-24
Release date:2019-10-30
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:An anti-CRISPR viral ring nuclease subverts type III CRISPR immunity.
Nature, 577, 2020
3ZED
DownloadVisualize
BU of 3zed by Molmil
X-ray structure of the birnavirus VP1-VP3 complex
Descriptor: CAPSID PROTEIN VP3, GLYCEROL, POTASSIUM ION, ...
Authors:Bahar, M.W, Sarin, L.P, Graham, S.C, Pang, J, Bamford, D.H, Stuart, D.I, Grimes, J.M.
Deposit date:2012-12-04
Release date:2013-01-16
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structure of a Vp1-Vp3 Complex Suggests How Birnaviruses Package the Vp1 Polymerase.
J.Virol., 87, 2013
5M5R
DownloadVisualize
BU of 5m5r by Molmil
Clathrin heavy chain N-terminal domain bound to beta2 adaptin clathrin box motif
Descriptor: AP-2 complex subunit beta, Clathrin heavy chain 1
Authors:Muenzner, J, Graham, S.C.
Deposit date:2016-10-22
Release date:2016-11-09
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.76 Å)
Cite:Cellular and viral peptides bind multiple sites on the N-terminal domain of clathrin.
Traffic, 18, 2017
5M61
DownloadVisualize
BU of 5m61 by Molmil
Clathrin heavy chain N-terminal domain bound to an extended amphiphysin clathrin-box motif
Descriptor: Amphiphysin, Clathrin heavy chain 1, GLYCEROL
Authors:Muenzner, J, Graham, S.C.
Deposit date:2016-10-23
Release date:2016-11-23
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.84 Å)
Cite:Cellular and viral peptides bind multiple sites on the N-terminal domain of clathrin.
Traffic, 18, 2017
5M5V
DownloadVisualize
BU of 5m5v by Molmil
Clathrin heavy chain N-terminal domain bound to a clathrin-box motif from hepatitis D virus large antigen (clade 2)
Descriptor: Clathrin heavy chain 1, GLYCEROL, Large delta antigen
Authors:Muenzner, J, Graham, S.C.
Deposit date:2016-10-22
Release date:2016-11-23
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.96 Å)
Cite:Cellular and viral peptides bind multiple sites on the N-terminal domain of clathrin.
Traffic, 18, 2017
5M5U
DownloadVisualize
BU of 5m5u by Molmil
Clathrin heavy chain N-terminal domain bound to a clathrin-box motif from hepatitis D virus large antigen (clade 1)
Descriptor: Clathrin heavy chain 1, GLYCEROL, Large delta antigen
Authors:Muenzner, J, Graham, S.C.
Deposit date:2016-10-22
Release date:2016-11-23
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:Cellular and viral peptides bind multiple sites on the N-terminal domain of clathrin.
Traffic, 18, 2017
5M5T
DownloadVisualize
BU of 5m5t by Molmil
Clathrin heavy chain N-terminal domain bound to a non-natural clathrin-box motif peptide (Amph4T1)
Descriptor: Amphiphysin, Clathrin heavy chain 1, GLYCEROL
Authors:Muenzner, J, Graham, S.C.
Deposit date:2016-10-22
Release date:2016-11-16
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Cellular and viral peptides bind multiple sites on the N-terminal domain of clathrin.
Traffic, 18, 2017
5M5S
DownloadVisualize
BU of 5m5s by Molmil
Clathrin heavy chain N-terminal domain bound to amphiphysin clathrin-box motif
Descriptor: Amphiphysin, Clathrin heavy chain 1, GLYCEROL
Authors:Muenzner, J, Graham, S.C.
Deposit date:2016-10-22
Release date:2016-11-16
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.88 Å)
Cite:Cellular and viral peptides bind multiple sites on the N-terminal domain of clathrin.
Traffic, 18, 2017
3TEK
DownloadVisualize
BU of 3tek by Molmil
ThermoDBP: a non-canonical single-stranded DNA binding protein with a novel structure and mechanism
Descriptor: ThermoDBP-single stranded DNA binding protein
Authors:White, M.F, Paytubi, S, Liu, H, Graham, S, McMahon, S.A, Naismith, J.H.
Deposit date:2011-08-15
Release date:2011-11-23
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2 Å)
Cite:Displacement of the canonical single-stranded DNA-binding protein in the Thermoproteales.
Proc.Natl.Acad.Sci.USA, 109, 2012
3P5E
DownloadVisualize
BU of 3p5e by Molmil
Structure of the carbohydrate-recognition domain of human Langerin with man4 (Man alpha1-3(Man alpha1-6)Man alpha1-6Man)
Descriptor: C-type lectin domain family 4 member K, CALCIUM ION, alpha-D-mannopyranose
Authors:Feinberg, H, Taylor, M.E, Razi, N, McBride, R, Knirel, Y.A, Graham, S.A, Drickamer, K, Weis, W.I.
Deposit date:2010-10-08
Release date:2010-12-08
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (1.7012 Å)
Cite:Structural Basis for Langerin Recognition of Diverse Pathogen and Mammalian Glycans through a Single Binding Site.
J.Mol.Biol., 405, 2011
3P5G
DownloadVisualize
BU of 3p5g by Molmil
Structure of the carbohydrate-recognition domain of human Langerin with Blood group B trisaccharide (Gal alpha1-3(Fuc alpha1-2)Gal)
Descriptor: C-type lectin domain family 4 member K, CALCIUM ION, alpha-L-fucopyranose, ...
Authors:Feinberg, H, Taylor, M.E, Razi, N, McBride, R, Knirel, Y.A, Graham, S.A, Drickamer, K, Weis, W.I.
Deposit date:2010-10-08
Release date:2010-12-08
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (1.6027 Å)
Cite:Structural Basis for Langerin Recognition of Diverse Pathogen and Mammalian Glycans through a Single Binding Site.
J.Mol.Biol., 405, 2011
3P87
DownloadVisualize
BU of 3p87 by Molmil
Structure of human PCNA bound to RNASEH2B PIP box peptide
Descriptor: Proliferating cell nuclear antigen, Ribonuclease H2 subunit B
Authors:Bubeck, D, Reijns, M.A, Graham, S.C, Astell, K.R, Jones, E.Y, Jackson, A.P.
Deposit date:2010-10-13
Release date:2011-02-02
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (2.99 Å)
Cite:PCNA directs type 2 RNase H activity on DNA replication and repair substrates.
Nucleic Acids Res., 39, 2011
3P5D
DownloadVisualize
BU of 3p5d by Molmil
Structure of the carbohydrate-recognition domain of human Langerin with man5 (Man alpha1-3(Man alpha1-6)Man alpha1-6)(Man- alpha1-3)Man
Descriptor: C-type lectin domain family 4 member K, CALCIUM ION, alpha-D-mannopyranose, ...
Authors:Feinberg, H, Taylor, M.E, Razi, N, McBride, R, Knirel, Y.A, Graham, S.A, Drickamer, K, Weis, W.I.
Deposit date:2010-10-08
Release date:2010-12-08
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (1.8013 Å)
Cite:Structural Basis for Langerin Recognition of Diverse Pathogen and Mammalian Glycans through a Single Binding Site.
J.Mol.Biol., 405, 2011
3P83
DownloadVisualize
BU of 3p83 by Molmil
Structure of the PCNA:RNase HII complex from Archaeoglobus fulgidus.
Descriptor: DNA polymerase sliding clamp, Ribonuclease HII
Authors:Bubeck, D, Reijns, M.A, Graham, S.C, Astell, K.R, Jones, E.Y, Jackson, A.P.
Deposit date:2010-10-13
Release date:2011-02-02
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (3.05 Å)
Cite:PCNA directs type 2 RNase H activity on DNA replication and repair substrates.
Nucleic Acids Res., 39, 2011
3P5H
DownloadVisualize
BU of 3p5h by Molmil
Structure of the carbohydrate-recognition domain of human Langerin with Laminaritriose
Descriptor: C-type lectin domain family 4 member K, CALCIUM ION, beta-D-glucopyranose, ...
Authors:Feinberg, H, Taylor, M.E, Razi, N, McBride, R, Knirel, Y.A, Graham, S.A, Drickamer, K, Weis, W.I.
Deposit date:2010-10-08
Release date:2010-12-08
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (1.6051 Å)
Cite:Structural Basis for Langerin Recognition of Diverse Pathogen and Mammalian Glycans through a Single Binding Site.
J.Mol.Biol., 405, 2011

226707

PDB entries from 2024-10-30

PDB statisticsPDBj update infoContact PDBjnumon