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PDB: 92 results

1EYV
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BU of 1eyv by Molmil
THE CRYSTAL STRUCTURE OF NUSB FROM MYCOBACTERIUM TUBERCULOSIS
Descriptor: N-UTILIZING SUBSTANCE PROTEIN B HOMOLOG, PHOSPHATE ION
Authors:Gopal, B, Haire, L.F, Cox, R.A, Colston, M.J, Major, S, Brannigan, J.A, Smerdon, S.J, Dodson, G.G, TB Structural Genomics Consortium (TBSGC)
Deposit date:2000-05-09
Release date:2000-05-18
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:The crystal structure of NusB from Mycobacterium tuberculosis.
Nat.Struct.Biol., 7, 2000
1K0R
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BU of 1k0r by Molmil
Crystal Structure of Mycobacterium tuberculosis NusA
Descriptor: NusA, SULFATE ION
Authors:Gopal, B, Haire, L.F, Gamblin, S.J, Dodson, E.J, Lane, A.N, Papavinasasundaram, K.G, Colston, M.J, Dodson, G, TB Structural Genomics Consortium (TBSGC)
Deposit date:2001-09-20
Release date:2001-12-21
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Crystal structure of the transcription elongation/anti-termination factor NusA from Mycobacterium tuberculosis at 1.7 A resolution.
J.Mol.Biol., 314, 2001
1Y3T
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Crystal structure of YxaG, a dioxygenase from Bacillus subtilis
Descriptor: FE (III) ION, Hypothetical protein yxaG
Authors:Gopal, B, Madan, L.L, Betz, S.F, Kossiakoff, A.A.
Deposit date:2004-11-26
Release date:2005-01-18
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:The Crystal Structure of a Quercetin 2,3-Dioxygenase from Bacillus subtilis Suggests Modulation of Enzyme Activity by a Change in the Metal Ion at the Active Site(s)
Biochemistry, 44, 2005
4XQN
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BU of 4xqn by Molmil
Crystal structure of AgrA LytTR domain in complex with promoters
Descriptor: 1,2-ETHANEDIOL, Accessory gene regulator A, DNA (5'-D(*AP*CP*AP*GP*TP*TP*AP*AP*GP*AP*AP*T)-3'), ...
Authors:Gopal, B, Rajasree, K.
Deposit date:2015-01-19
Release date:2016-04-06
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Conformational features of theStaphylococcus aureusAgrA-promoter interactions rationalize quorum-sensing triggered gene expression.
Biochem Biophys Rep, 6, 2016
4XQJ
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BU of 4xqj by Molmil
Crystal structure of AgrA LytTR domain in complex with promoters
Descriptor: 1,2-ETHANEDIOL, Accessory gene regulator A, CALCIUM ION, ...
Authors:Gopal, B, Rajasree, K.
Deposit date:2015-01-19
Release date:2016-04-06
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Conformational features of theStaphylococcus aureusAgrA-promoter interactions rationalize quorum-sensing triggered gene expression.
Biochem Biophys Rep, 6, 2016
4XYQ
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BU of 4xyq by Molmil
Structure of AgrA LytTR domain in complex with promoters
Descriptor: 1,2-ETHANEDIOL, Accessory gene regulator A, DNA (5'-D(*AP*AP*TP*AP*CP*TP*TP*AP*AP*CP*TP*GP*TP*TP*AP*A)-3'), ...
Authors:Gopal, B, Rajasree, K.
Deposit date:2015-02-03
Release date:2016-04-06
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Conformational features of theStaphylococcus aureusAgrA-promoter interactions rationalize quorum-sensing triggered gene expression.
Biochem Biophys Rep, 6, 2016
4XXE
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BU of 4xxe by Molmil
Structure of AgrA LytTR domain in complex with promoters
Descriptor: Accessory gene regulator A, DNA (5'-D(*AP*TP*TP*GP*CP*CP*TP*AP*AP*CP*TP*GP*TP*AP*G)-3'), DNA (5'-D(P*TP*AP*CP*AP*GP*TP*TP*AP*GP*GP*CP*AP*A)-3'), ...
Authors:Gopal, B, Rajasree, K.
Deposit date:2015-01-30
Release date:2016-04-06
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Conformational features of theStaphylococcus aureusAgrA-promoter interactions rationalize quorum-sensing triggered gene expression.
Biochem Biophys Rep, 6, 2016
4XQQ
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Crystal structure of AgrA LytTR domain in complex with promoters
Descriptor: Accessory gene regulator A, DNA (5'-D(*AP*TP*TP*TP*CP*TP*TP*AP*AP*CP*TP*AP*GP*TP*CP*G)-3'), DNA (5'-D(*TP*CP*GP*AP*CP*TP*AP*GP*TP*TP*AP*AP*GP*AP*AP*A)-3')
Authors:Gopal, B, Rajasree, K.
Deposit date:2015-01-19
Release date:2016-04-27
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (3.05 Å)
Cite:Conformational features of theStaphylococcus aureusAgrA-promoter interactions rationalize quorum-sensing triggered gene expression.
Biochem Biophys Rep, 6, 2016
4XYO
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BU of 4xyo by Molmil
Structure of AgrA LytTR domain
Descriptor: 1,2-ETHANEDIOL, Accessory gene regulator A
Authors:Gopal, B, Rajasree, K.
Deposit date:2015-02-02
Release date:2016-04-06
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2 Å)
Cite:Conformational features of theStaphylococcus aureusAgrA-promoter interactions rationalize quorum-sensing triggered gene expression.
Biochem Biophys Rep, 6, 2016
8Q1W
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BU of 8q1w by Molmil
TtX183B - A c-type cytochrome domain from the Teredinibacter turnerae protein TERTU_2913
Descriptor: CHLORIDE ION, HEME C, Putative lipoprotein, ...
Authors:Rajagopal, B.S, Hemsworth, G.R.
Deposit date:2023-08-01
Release date:2024-03-13
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural dissection of two redox proteins from the shipworm symbiont Teredinibacter turnerae.
Iucrj, 11, 2024
8Q28
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Se-Met labelled TtX122A - A domain of unknown function from the Teredinibacter turnerae protein TERTU_3803
Descriptor: 1,2-ETHANEDIOL, CALCIUM ION, Gluconolactonase domain protein, ...
Authors:Rajagopal, B.S, Hemsworth, G.R.
Deposit date:2023-08-01
Release date:2024-03-13
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural dissection of two redox proteins from the shipworm symbiont Teredinibacter turnerae.
Iucrj, 11, 2024
8Q1V
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BU of 8q1v by Molmil
TtX183A - A c-type cytochrome domain from the Teredinibacter turnerae protein TERTU_2913
Descriptor: CHLORIDE ION, HEME C, Putative lipoprotein
Authors:Rajagopal, B.S, Hemsworth, G.R.
Deposit date:2023-08-01
Release date:2024-03-13
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Structural dissection of two redox proteins from the shipworm symbiont Teredinibacter turnerae.
Iucrj, 11, 2024
8Q2A
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BU of 8q2a by Molmil
TtX122B - A domain of unknown function from the Teredinibacter turnerae protein TERTU_2913
Descriptor: CALCIUM ION, Putative lipoprotein
Authors:Rajagopal, B.S, Hemsworth, G.R.
Deposit date:2023-08-01
Release date:2024-03-13
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural dissection of two redox proteins from the shipworm symbiont Teredinibacter turnerae.
Iucrj, 11, 2024
8Q29
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BU of 8q29 by Molmil
TtX122A - A domain of unknown function from the Teredinibacter turnerae protein TERTU_3803
Descriptor: 1,2-ETHANEDIOL, CALCIUM ION, Gluconolactonase domain protein, ...
Authors:Rajagopal, B.S, Hemsworth, G.R.
Deposit date:2023-08-01
Release date:2024-03-13
Last modified:2024-03-20
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structural dissection of two redox proteins from the shipworm symbiont Teredinibacter turnerae.
Iucrj, 11, 2024
3ZOO
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BU of 3zoo by Molmil
Structure of the Y46F mutant of human cytochrome c
Descriptor: CYTOCHROME C, HEME C, PHOSPHATE ION
Authors:Rajagopal, B.S, Worrall, J.A.R, Hough, M.A.
Deposit date:2013-02-22
Release date:2013-10-23
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:The Hydrogen Peroxide Induced Radical Behaviour in Human Cytochrome C Phospholipid Complexes: Implications for the Enhanced Pro-Apoptotic Activity of the G41S Mutant
Biochem.J., 456, 2013
3ZCF
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BU of 3zcf by Molmil
Structure of recombinant human cytochrome c
Descriptor: CYTOCHROME C, HEME C
Authors:Rajagopal, B.S, Worrall, J.A.R, Hough, M.A.
Deposit date:2012-11-20
Release date:2013-10-23
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:The Hydrogen Peroxide Induced Radical Behaviour in Human Cytochrome C Phospholipid Complexes: Implications for the Enhanced Pro-Apoptotic Activity of the G41S Mutant
Biochem.J., 456, 2013
3VFZ
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BU of 3vfz by Molmil
Crystal structure of -35 promoter binding domain of SigD of Mycobacterium tuberculosis
Descriptor: Probable RNA polymerase sigma-D factor
Authors:Jaiswal, R.K, Thakur, K.G, Gopal, B.
Deposit date:2012-01-10
Release date:2013-02-13
Last modified:2013-10-09
Method:X-RAY DIFFRACTION (1.901 Å)
Cite:Mycobacterium tuberculosis RsdA provides a conformational rationale for selective regulation of sigma-factor activity by proteolysis
Nucleic Acids Res., 41, 2013
4PG4
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BU of 4pg4 by Molmil
Crystal structure of S. aureus Homoserine Dehydrogenase at pH6.0
Descriptor: ACETATE ION, DI(HYDROXYETHYL)ETHER, DIMETHYL SULFOXIDE, ...
Authors:Navratna, V, Gopal, B.
Deposit date:2014-05-01
Release date:2015-05-06
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural basis for the catalytic mechanism of homoserine dehydrogenase.
Acta Crystallogr.,Sect.D, 71, 2015
4PG6
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BU of 4pg6 by Molmil
Crystal structure of S. aureus Homoserine Dehydrogenase at pH7.0
Descriptor: ACETATE ION, DI(HYDROXYETHYL)ETHER, DIMETHYL SULFOXIDE, ...
Authors:Navratna, V, Gopal, B.
Deposit date:2014-05-01
Release date:2015-05-13
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural basis for the catalytic mechanism of homoserine dehydrogenase.
Acta Crystallogr.,Sect.D, 71, 2015
4PG8
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BU of 4pg8 by Molmil
Crystal structure of S. aureus Homoserine Dehydrogenase at pH8.5
Descriptor: ACETATE ION, DI(HYDROXYETHYL)ETHER, DIMETHYL SULFOXIDE, ...
Authors:Navratna, V, Gopal, B.
Deposit date:2014-05-01
Release date:2015-05-06
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural basis for the catalytic mechanism of homoserine dehydrogenase.
Acta Crystallogr.,Sect.D, 71, 2015
4PG5
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BU of 4pg5 by Molmil
Crystal structure of S. aureus Homoserine Dehydrogenase at pH6.5
Descriptor: ACETATE ION, DI(HYDROXYETHYL)ETHER, DIMETHYL SULFOXIDE, ...
Authors:Navratna, V, Gopal, B.
Deposit date:2014-05-01
Release date:2015-05-06
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural basis for the catalytic mechanism of homoserine dehydrogenase.
Acta Crystallogr.,Sect.D, 71, 2015
4PG7
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BU of 4pg7 by Molmil
Crystal structure of S. aureus Homoserine Dehydrogenase at pH7.5
Descriptor: ACETATE ION, DI(HYDROXYETHYL)ETHER, GLYCEROL, ...
Authors:Navratna, V, Gopal, B.
Deposit date:2014-05-01
Release date:2015-05-06
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural basis for the catalytic mechanism of homoserine dehydrogenase.
Acta Crystallogr.,Sect.D, 71, 2015
3VEP
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BU of 3vep by Molmil
Crystal structure of SigD4 in complex with its negative regulator RsdA
Descriptor: Probable RNA polymerase sigma-D factor, SULFATE ION, Uncharacterized protein Rv3413c/MT3522
Authors:Jaiswal, R.K, Gopal, B.
Deposit date:2012-01-09
Release date:2013-02-13
Last modified:2013-10-09
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Mycobacterium tuberculosis RsdA provides a conformational rationale for selective regulation of sigma-factor activity by proteolysis
Nucleic Acids Res., 41, 2013
8I6D
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BU of 8i6d by Molmil
Crystal structure of Mycobacterium tuberculosis Uracil-DNA glycosylase in complex with 5-Hydroxy-2,4(1H,3H)-pyrimidinedione, Form VI
Descriptor: 1,2-ETHANEDIOL, 5-oxidanyl-1~{H}-pyrimidine-2,4-dione, DI(HYDROXYETHYL)ETHER, ...
Authors:Raj, P, Paul, A, Gopal, B.
Deposit date:2023-01-27
Release date:2023-07-12
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Crystal structures of non-uracil ring fragments in complex with Mycobacterium tuberculosis uracil DNA glycosylase (MtUng) as a starting point for novel inhibitor design: A case study with the barbituric acid fragment.
Eur.J.Med.Chem., 258, 2023
8I67
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Crystal structure of Mycobacterium tuberculosis Uracil-DNA glycosylase in complex with 2,4-Thiazolidinedione, Form I
Descriptor: 1,2-ETHANEDIOL, 1,3-thiazolidine-2,4-dione, Uracil-DNA glycosylase
Authors:Raj, P, Paul, A, Gopal, B.
Deposit date:2023-01-27
Release date:2023-07-12
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.72 Å)
Cite:Crystal structures of non-uracil ring fragments in complex with Mycobacterium tuberculosis uracil DNA glycosylase (MtUng) as a starting point for novel inhibitor design: A case study with the barbituric acid fragment.
Eur.J.Med.Chem., 258, 2023

 

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