4XQN

Crystal structure of AgrA LytTR domain in complex with promoters

Summary for 4XQN

Related4XQJ 4XQQ
DescriptorDNA (5'-D(*AP*CP*AP*GP*TP*TP*AP*AP*GP*AP*AP*T)-3'), DNA (5'-D(P*AP*AP*TP*TP*CP*TP*TP*AP*AP*CP*TP*GP*T)-3'), Accessory gene regulator A, ... (5 entities in total)
Functional Keywordsdna-dna binding protein complex, dna/dna binding protein
Biological sourceStaphylococcus aureus (strain COL)
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Total number of polymer chains12
Total molecular weight78740.63
Authors
Gopal, B.,Rajasree, K. (deposition date: 2015-01-19, release date: 2016-04-06, Last modification date: 2019-12-18)
Primary citation
Rajasree, K.,Fasim, A.,Gopal, B.
Conformational features of theStaphylococcus aureusAgrA-promoter interactions rationalize quorum-sensing triggered gene expression.
Biochem Biophys Rep, 6:124-134, 2016
PubMed: 28955870 (PDB entries with the same primary citation)
DOI: 10.1016/j.bbrep.2016.03.012
MImport into Mendeley
Experimental method
X-RAY DIFFRACTION (2.3 Å)
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Structure validation

RfreeClashscoreRamachandran outliersSidechain outliersRSRZ outliers 0.251200 4.3%MetricValuePercentile RanksWorseBetterPercentile relative to all X-ray structuresPercentile relative to X-ray structures of similar resolution
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PDB entries from 2020-10-21