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PDB: 142 results

7MRP
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BU of 7mrp by Molmil
MicroED structure of lysozyme from milled crystals at 1.75A
Descriptor: CHLORIDE ION, Lysozyme C, SODIUM ION
Authors:Martynowycz, M.W, Gonen, T.
Deposit date:2021-05-07
Release date:2022-05-11
Method:ELECTRON CRYSTALLOGRAPHY (1.75 Å)
Cite:Preparing crystalline lamellae by focused ion-beam milling for microcrystal electron diffraction (MicroED) experiments
To be Published
6VHC
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BU of 6vhc by Molmil
1.4A damaged structure of GSNQNNF used to determine initial phases from radiation damage
Descriptor: ACETATE ION, GSNQNNF, ZINC ION
Authors:Martynowycz, M.W, Hattne, J, Gonen, T.
Deposit date:2020-01-09
Release date:2020-02-19
Last modified:2024-03-06
Method:ELECTRON CRYSTALLOGRAPHY (1.4 Å)
Cite:Experimental Phasing of MicroED Data Using Radiation Damage.
Structure, 28, 2020
6VHB
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BU of 6vhb by Molmil
1.4A low-dose structure of GSNQNNF determined from initial phases generated using radiation damage
Descriptor: ACETATE ION, GSNQNNF, ZINC ION
Authors:Martynowycz, M.W, Hattne, J, Gonen, T.
Deposit date:2020-01-09
Release date:2020-02-19
Last modified:2024-03-06
Method:ELECTRON CRYSTALLOGRAPHY (1.4 Å)
Cite:Experimental Phasing of MicroED Data Using Radiation Damage.
Structure, 28, 2020
6MXF
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BU of 6mxf by Molmil
MicroED structure of thiostrepton at 1.9 A resolution
Descriptor: Thiostrepton
Authors:Jones, C.G, Martynowycz, M.W, Hattne, J, Fulton, T, Stoltz, B.M, Rodriguez, J.A, Nelson, H.M, Gonen, T.
Deposit date:2018-10-30
Release date:2018-11-21
Last modified:2023-11-15
Method:ELECTRON CRYSTALLOGRAPHY (1.91 Å)
Cite:The CryoEM Method MicroED as a Powerful Tool for Small Molecule Structure Determination.
ACS Cent Sci, 4, 2018
5TY4
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BU of 5ty4 by Molmil
MicroED structure of a complex between monomeric TGF-b and its receptor, TbRII, at 2.9 A resolution
Descriptor: TGF-beta receptor type-2, mmTGF-b2-7m
Authors:Weiss, S.C, de la Cruz, M.J, Hattne, J, Shi, D, Reyes, F.E, Callero, G, Gonen, T.
Deposit date:2016-11-18
Release date:2017-04-26
Last modified:2023-10-04
Method:ELECTRON CRYSTALLOGRAPHY (2.9 Å)
Cite:Atomic-resolution structures from fragmented protein crystals with the cryoEM method MicroED.
Nat. Methods, 14, 2017
5VOS
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BU of 5vos by Molmil
VGSNKGAIIGL from Amyloid Beta determined by MicroED
Descriptor: Amyloid beta A4 protein
Authors:Rodriguez, J.A, Sawaya, M.R, Cascio, D, Eisenberg, D.S, Griner, S.L, Gonen, T.
Deposit date:2017-05-03
Release date:2018-01-03
Last modified:2024-03-13
Method:ELECTRON CRYSTALLOGRAPHY (1.42 Å)
Cite:Common fibrillar spines of amyloid-beta and human islet amyloid polypeptide revealed by microelectron diffraction and structure-based inhibitors.
J. Biol. Chem., 293, 2018
6M7M
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BU of 6m7m by Molmil
rac-GSTSTA from degenerate octameric repeats in InaZ, residues 707-712
Descriptor: L-GSTSTA from ice nucleation protein, inaZ, and its enantiomer, ...
Authors:Zee, C, Glynn, C, Gallagher-Jones, M, Miao, J, Santiago, C.G, Cascio, D, Gonen, T, Sawaya, M.R, Rodriguez, J.A.
Deposit date:2018-08-20
Release date:2019-04-03
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (1.101 Å)
Cite:Homochiral and racemic MicroED structures of a peptide repeat from the ice-nucleation protein InaZ.
IUCrJ, 6, 2019
6M9J
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BU of 6m9j by Molmil
Racemic-GSTSTA from degenerate octameric repeats in InaZ, residues 707-712
Descriptor: Ice nucleation protein
Authors:Zee, C, Glynn, C, Gallagher-Jones, M, Miao, J, Santiago, C.G, Cascio, D, Gonen, T, Sawaya, M.R, Rodriguez, J.A.
Deposit date:2018-08-23
Release date:2019-03-27
Last modified:2024-03-13
Method:ELECTRON CRYSTALLOGRAPHY (0.9 Å)
Cite:Homochiral and racemic MicroED structures of a peptide repeat from the ice-nucleation protein InaZ.
IUCrJ, 6, 2019
6N4U
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BU of 6n4u by Molmil
MicroED structure of Proteinase K at 2.75A resolution from a single milled crystal.
Descriptor: CALCIUM ION, Proteinase K, SULFATE ION
Authors:Martynowycz, M.W, Zhao, W, Hattne, J, Jensen, G.J, Gonen, T.
Deposit date:2018-11-20
Release date:2019-02-06
Last modified:2023-10-11
Method:ELECTRON CRYSTALLOGRAPHY (2.75 Å)
Cite:Collection of Continuous Rotation MicroED Data from Ion Beam-Milled Crystals of Any Size.
Structure, 27, 2019
6C9I
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BU of 6c9i by Molmil
Single-Particle reconstruction of DARP14 - A designed protein scaffold displaying ~17kDa DARPin proteins - Scaffold
Descriptor: DARP14 - Subunit A with DARPin, DARP14 - Subunit B
Authors:Gonen, S, Liu, Y, Yeates, T.O, Gonen, T.
Deposit date:2018-01-26
Release date:2018-03-21
Last modified:2024-03-13
Method:ELECTRON MICROSCOPY (3.09 Å)
Cite:Near-atomic cryo-EM imaging of a small protein displayed on a designed scaffolding system.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
6NB9
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BU of 6nb9 by Molmil
Amyloid-Beta (20-34) with L-isoaspartate 23
Descriptor: Amyloid-beta A4 protein
Authors:Sawaya, M.R, Warmack, R.A, Boyer, D.R, Zee, C.T, Richards, L.S, Cascio, D, Gonen, T, Clarke, S.G, Eisenberg, D.S.
Deposit date:2018-12-06
Release date:2019-08-07
Last modified:2022-09-07
Method:ELECTRON CRYSTALLOGRAPHY (1.05 Å)
Cite:Structure of amyloid-beta (20-34) with Alzheimer's-associated isomerization at Asp23 reveals a distinct protofilament interface.
Nat Commun, 10, 2019
6OIZ
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BU of 6oiz by Molmil
Amyloid-Beta (20-34) wild type
Descriptor: Amyloid beta A4 protein
Authors:Sawaya, M.R, Warmack, R.A, Zee, C.T, Gonen, T, Clarke, S.G, Eisenberg, D.S.
Deposit date:2019-04-10
Release date:2019-08-07
Last modified:2024-05-15
Method:ELECTRON CRYSTALLOGRAPHY (1.1 Å)
Cite:Structure of amyloid-beta (20-34) with Alzheimer's-associated isomerization at Asp23 reveals a distinct protofilament interface.
Nat Commun, 10, 2019
6C9K
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BU of 6c9k by Molmil
Single-Particle reconstruction of DARP14 - A designed protein scaffold displaying ~17kDa DARPin proteins
Descriptor: DARP14 - Subunit A with DARPin, DARP14 - Subunit B
Authors:Gonen, S, Liu, Y, Yeates, T.O, Gonen, T.
Deposit date:2018-01-26
Release date:2018-03-21
Last modified:2024-03-13
Method:ELECTRON MICROSCOPY (3.49 Å)
Cite:Near-atomic cryo-EM imaging of a small protein displayed on a designed scaffolding system.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
3J07
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BU of 3j07 by Molmil
Model of a 24mer alphaB-crystallin multimer
Descriptor: Alpha-crystallin B chain
Authors:Jehle, S, Vollmar, B, Bardiaux, B, Dove, K.K, Rajagopal, P, Gonen, T, Oschkinat, H, Klevit, R.E.
Deposit date:2011-04-27
Release date:2016-01-20
Last modified:2024-05-01
Method:ELECTRON MICROSCOPY (20 Å), SOLID-STATE NMR, SOLUTION SCATTERING
Cite:N-terminal domain of {alpha}B-crystallin provides a conformational switch for multimerization and structural heterogeneity.
Proc.Natl.Acad.Sci.USA, 108, 2011
3J4R
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BU of 3j4r by Molmil
Pseudo-atomic model of the AKAP18-PKA Complex in a linear conformation derived from electron microscopy
Descriptor: A-kinase anchor protein 18, cAMP-dependent protein kinase catalytic subunit alpha, cAMP-dependent protein kinase type II-alpha regulatory subunit
Authors:Reichow, S.L, Gonen, T.
Deposit date:2013-09-25
Release date:2013-11-13
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (35 Å)
Cite:Intrinsic disorder within an AKAP-protein kinase A complex guides local substrate phosphorylation.
Elife, 2, 2013
3J6K
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BU of 3j6k by Molmil
2.5A structure of lysozyme solved by MicroED
Descriptor: Lysozyme C
Authors:Nannenga, B.L, Shi, D, Leslie, A.G.W, Gonen, T.
Deposit date:2014-03-18
Release date:2014-08-13
Last modified:2015-04-08
Method:ELECTRON CRYSTALLOGRAPHY (2.496 Å)
Cite:High-resolution structure determination by continuous-rotation data collection in MicroED.
Nat.Methods, 11, 2014
3J4Q
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BU of 3j4q by Molmil
Pseudo-atomic model of the AKAP18-PKA complex in a bent conformation derived from electron microscopy
Descriptor: A-kinase anchor protein 18, cAMP-dependent protein kinase catalytic subunit alpha, cAMP-dependent protein kinase type II-alpha regulatory subunit
Authors:Reichow, S.L, Gonen, T.
Deposit date:2013-09-25
Release date:2013-11-13
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (35 Å)
Cite:Intrinsic disorder within an AKAP-protein kinase A complex guides local substrate phosphorylation.
Elife, 2, 2013
3J7B
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BU of 3j7b by Molmil
Catalase solved at 3.2 Angstrom resolution by MicroED
Descriptor: Catalase, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, PROTOPORPHYRIN IX CONTAINING FE
Authors:Nannenga, B.L, Shi, D, Hattne, J, Reyes, F.E, Gonen, T.
Deposit date:2014-06-09
Release date:2014-10-08
Last modified:2024-02-21
Method:ELECTRON CRYSTALLOGRAPHY (3.2 Å)
Cite:Structure of catalase determined by MicroED.
Elife, 3, 2014
3J41
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BU of 3j41 by Molmil
Pseudo-atomic model of the Aquaporin-0/Calmodulin complex derived from electron microscopy
Descriptor: CALCIUM ION, Calmodulin, Lens fiber major intrinsic protein
Authors:Reichow, S.L, Clemens, D.M, Freites, J.A, Nemeth-Cahalan, K.L, Heyden, M, Tobias, D.J, Hall, J.E, Gonen, T.
Deposit date:2013-05-31
Release date:2013-07-31
Last modified:2024-02-21
Method:ELECTRON MICROSCOPY (25 Å)
Cite:Allosteric mechanism of water-channel gating by Ca(2+)-calmodulin.
Nat.Struct.Mol.Biol., 20, 2013
3J4G
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BU of 3j4g by Molmil
Structure of lysozyme solved by MicroED to 2.9 A
Descriptor: Lysozyme C
Authors:Shi, D, Nannenga, B.L, Iadanza, M.G, Gonen, T.
Deposit date:2013-08-12
Release date:2013-11-13
Last modified:2015-04-15
Method:ELECTRON CRYSTALLOGRAPHY (2.901 Å)
Cite:Three-dimensional electron crystallography of protein microcrystals.
Elife, 2, 2013
8W1C
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BU of 8w1c by Molmil
Cryo-EM structure of BTV pre-subcore
Descriptor: Core protein VP3, VP6
Authors:Xia, X, Sung, P.Y, Martynowycz, M.W, Gonen, T, Roy, P, Zhou, Z.H.
Deposit date:2024-02-15
Release date:2024-04-24
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:RNA genome packaging and capsid assembly of bluetongue virus visualized in host cells.
Cell, 187, 2024
8W1O
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BU of 8w1o by Molmil
Cryo-EM structure of BTV virion
Descriptor: Core protein VP3, Outer capsid protein VP2, RNA-1, ...
Authors:Xia, X, Sung, P.Y, Martynowycz, M.W, Gonen, T, Roy, P, Zhou, Z.H.
Deposit date:2024-02-16
Release date:2024-04-24
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (2.8 Å)
Cite:RNA genome packaging and capsid assembly of bluetongue virus visualized in host cells.
Cell, 187, 2024
8W1I
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BU of 8w1i by Molmil
Cryo-EM structure of BTV subcore
Descriptor: Core protein VP3
Authors:Xia, X, Sung, P.Y, Martynowycz, M.W, Gonen, T, Roy, P, Zhou, Z.H.
Deposit date:2024-02-16
Release date:2024-04-24
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (6.5 Å)
Cite:RNA genome packaging and capsid assembly of bluetongue virus visualized in host cells.
Cell, 187, 2024
8W19
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BU of 8w19 by Molmil
Cryo-EM structure of BTV star-subcore
Descriptor: Core protein VP3, VP6
Authors:Xia, X, Sung, P.Y, Martynowycz, M.W, Gonen, T, Roy, P, Zhou, Z.H.
Deposit date:2024-02-15
Release date:2024-04-24
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (4.4 Å)
Cite:RNA genome packaging and capsid assembly of bluetongue virus visualized in host cells.
Cell, 187, 2024
8W12
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BU of 8w12 by Molmil
Cryo-EM structure of VP3-VP6 heterohexamer
Descriptor: Core protein VP3, VP6
Authors:Xia, X, Sung, P.Y, Martynowycz, M.W, Gonen, T, Roy, P, Zhou, Z.H.
Deposit date:2024-02-14
Release date:2024-04-24
Last modified:2024-05-08
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:RNA genome packaging and capsid assembly of bluetongue virus visualized in host cells.
Cell, 187, 2024

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PDB entries from 2024-07-17

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