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PDB: 142 件

6NB9
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Amyloid-Beta (20-34) with L-isoaspartate 23
分子名称: Amyloid-beta A4 protein
著者Sawaya, M.R, Warmack, R.A, Boyer, D.R, Zee, C.T, Richards, L.S, Cascio, D, Gonen, T, Clarke, S.G, Eisenberg, D.S.
登録日2018-12-06
公開日2019-08-07
最終更新日2022-09-07
実験手法ELECTRON CRYSTALLOGRAPHY (1.05 Å)
主引用文献Structure of amyloid-beta (20-34) with Alzheimer's-associated isomerization at Asp23 reveals a distinct protofilament interface.
Nat Commun, 10, 2019
6OIZ
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BU of 6oiz by Molmil
Amyloid-Beta (20-34) wild type
分子名称: Amyloid beta A4 protein
著者Sawaya, M.R, Warmack, R.A, Zee, C.T, Gonen, T, Clarke, S.G, Eisenberg, D.S.
登録日2019-04-10
公開日2019-08-07
最終更新日2024-05-15
実験手法ELECTRON CRYSTALLOGRAPHY (1.1 Å)
主引用文献Structure of amyloid-beta (20-34) with Alzheimer's-associated isomerization at Asp23 reveals a distinct protofilament interface.
Nat Commun, 10, 2019
6C9K
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BU of 6c9k by Molmil
Single-Particle reconstruction of DARP14 - A designed protein scaffold displaying ~17kDa DARPin proteins
分子名称: DARP14 - Subunit A with DARPin, DARP14 - Subunit B
著者Gonen, S, Liu, Y, Yeates, T.O, Gonen, T.
登録日2018-01-26
公開日2018-03-21
最終更新日2024-03-13
実験手法ELECTRON MICROSCOPY (3.49 Å)
主引用文献Near-atomic cryo-EM imaging of a small protein displayed on a designed scaffolding system.
Proc. Natl. Acad. Sci. U.S.A., 115, 2018
6M7M
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BU of 6m7m by Molmil
rac-GSTSTA from degenerate octameric repeats in InaZ, residues 707-712
分子名称: L-GSTSTA from ice nucleation protein, inaZ, and its enantiomer, ...
著者Zee, C, Glynn, C, Gallagher-Jones, M, Miao, J, Santiago, C.G, Cascio, D, Gonen, T, Sawaya, M.R, Rodriguez, J.A.
登録日2018-08-20
公開日2019-04-03
最終更新日2024-03-13
実験手法X-RAY DIFFRACTION (1.101 Å)
主引用文献Homochiral and racemic MicroED structures of a peptide repeat from the ice-nucleation protein InaZ.
IUCrJ, 6, 2019
6M9J
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BU of 6m9j by Molmil
Racemic-GSTSTA from degenerate octameric repeats in InaZ, residues 707-712
分子名称: Ice nucleation protein
著者Zee, C, Glynn, C, Gallagher-Jones, M, Miao, J, Santiago, C.G, Cascio, D, Gonen, T, Sawaya, M.R, Rodriguez, J.A.
登録日2018-08-23
公開日2019-03-27
最終更新日2024-03-13
実験手法ELECTRON CRYSTALLOGRAPHY (0.9 Å)
主引用文献Homochiral and racemic MicroED structures of a peptide repeat from the ice-nucleation protein InaZ.
IUCrJ, 6, 2019
7KUH
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BU of 7kuh by Molmil
MicroED structure of mVDAC
分子名称: Voltage-dependent anion-selective channel protein 1
著者Martynowycz, M.W, Khan, F, Hattne, J, Abramson, J, Gonen, T.
登録日2020-11-25
公開日2020-12-23
最終更新日2024-03-06
実験手法ELECTRON CRYSTALLOGRAPHY (3.12 Å)
主引用文献MicroED structure of lipid-embedded mammalian mitochondrial voltage-dependent anion channel.
Proc.Natl.Acad.Sci.USA, 117, 2020
3J07
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BU of 3j07 by Molmil
Model of a 24mer alphaB-crystallin multimer
分子名称: Alpha-crystallin B chain
著者Jehle, S, Vollmar, B, Bardiaux, B, Dove, K.K, Rajagopal, P, Gonen, T, Oschkinat, H, Klevit, R.E.
登録日2011-04-27
公開日2016-01-20
最終更新日2024-05-01
実験手法ELECTRON MICROSCOPY (20 Å), SOLID-STATE NMR, SOLUTION SCATTERING
主引用文献N-terminal domain of {alpha}B-crystallin provides a conformational switch for multimerization and structural heterogeneity.
Proc.Natl.Acad.Sci.USA, 108, 2011
7JSY
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BU of 7jsy by Molmil
Proteinase K soaked with I3C determined by MicroED from a single milled microcrystal
分子名称: 5-amino-2,4,6-triiodobenzene-1,3-dicarboxylic acid, Proteinase K
著者Martynowycz, M.W, Gonen, T.
登録日2020-08-16
公開日2020-10-14
最終更新日2021-01-20
実験手法ELECTRON CRYSTALLOGRAPHY (1.78 Å)
主引用文献Ligand Incorporation into Protein Microcrystals for MicroED by On-Grid Soaking.
Structure, 29, 2021
7MRP
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BU of 7mrp by Molmil
MicroED structure of lysozyme from milled crystals at 1.75A
分子名称: CHLORIDE ION, Lysozyme C, SODIUM ION
著者Martynowycz, M.W, Gonen, T.
登録日2021-05-07
公開日2022-05-11
実験手法ELECTRON CRYSTALLOGRAPHY (1.75 Å)
主引用文献Preparing crystalline lamellae by focused ion-beam milling for microcrystal electron diffraction (MicroED) experiments
To be Published
6VHC
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BU of 6vhc by Molmil
1.4A damaged structure of GSNQNNF used to determine initial phases from radiation damage
分子名称: ACETATE ION, GSNQNNF, ZINC ION
著者Martynowycz, M.W, Hattne, J, Gonen, T.
登録日2020-01-09
公開日2020-02-19
最終更新日2024-03-06
実験手法ELECTRON CRYSTALLOGRAPHY (1.4 Å)
主引用文献Experimental Phasing of MicroED Data Using Radiation Damage.
Structure, 28, 2020
6VHB
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BU of 6vhb by Molmil
1.4A low-dose structure of GSNQNNF determined from initial phases generated using radiation damage
分子名称: ACETATE ION, GSNQNNF, ZINC ION
著者Martynowycz, M.W, Hattne, J, Gonen, T.
登録日2020-01-09
公開日2020-02-19
最終更新日2024-03-06
実験手法ELECTRON CRYSTALLOGRAPHY (1.4 Å)
主引用文献Experimental Phasing of MicroED Data Using Radiation Damage.
Structure, 28, 2020
5TY4
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BU of 5ty4 by Molmil
MicroED structure of a complex between monomeric TGF-b and its receptor, TbRII, at 2.9 A resolution
分子名称: TGF-beta receptor type-2, mmTGF-b2-7m
著者Weiss, S.C, de la Cruz, M.J, Hattne, J, Shi, D, Reyes, F.E, Callero, G, Gonen, T.
登録日2016-11-18
公開日2017-04-26
最終更新日2023-10-04
実験手法ELECTRON CRYSTALLOGRAPHY (2.9 Å)
主引用文献Atomic-resolution structures from fragmented protein crystals with the cryoEM method MicroED.
Nat. Methods, 14, 2017
5K7N
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BU of 5k7n by Molmil
MicroED structure of tau VQIVYK peptide at 1.1 A resolution
分子名称: VQIVYK
著者de la Cruz, M.J, Hattne, J, Shi, D, Seidler, P, Rodriguez, J, Reyes, F.E, Sawaya, M.R, Cascio, D, Eisenberg, D, Gonen, T.
登録日2016-05-26
公開日2017-04-05
最終更新日2024-02-28
実験手法ELECTRON CRYSTALLOGRAPHY (1.1 Å)
主引用文献Atomic-resolution structures from fragmented protein crystals with the cryoEM method MicroED.
Nat. Methods, 14, 2017
5VOS
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BU of 5vos by Molmil
VGSNKGAIIGL from Amyloid Beta determined by MicroED
分子名称: Amyloid beta A4 protein
著者Rodriguez, J.A, Sawaya, M.R, Cascio, D, Eisenberg, D.S, Griner, S.L, Gonen, T.
登録日2017-05-03
公開日2018-01-03
最終更新日2024-03-13
実験手法ELECTRON CRYSTALLOGRAPHY (1.42 Å)
主引用文献Common fibrillar spines of amyloid-beta and human islet amyloid polypeptide revealed by microelectron diffraction and structure-based inhibitors.
J. Biol. Chem., 293, 2018
8D2V
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BU of 8d2v by Molmil
Zebrafish MFSD2A isoform B in inward open ligand 1B conformation
分子名称: DODECYL-BETA-D-MALTOSIDE, FAB heavy chain, FAB light chain, ...
著者Nguyen, C, Lei, H.T, Lai, L.T.F, Gallentino, M.J, Mu, X, Matthies, D, Gonen, T.
登録日2022-05-30
公開日2023-05-10
最終更新日2023-05-24
実験手法ELECTRON MICROSCOPY (4.1 Å)
主引用文献Lipid flipping in the omega-3 fatty-acid transporter.
Nat Commun, 14, 2023
8D2U
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BU of 8d2u by Molmil
Zebrafish MFSD2A isoform B in inward open ligand 1A conformation
分子名称: DODECYL-BETA-D-MALTOSIDE, FAB heavy chain, FAB light chain, ...
著者Nguyen, C, Lei, H.T, Lai, L.T.F, Gallentino, M.J, Mu, X, Matthies, D, Gonen, T.
登録日2022-05-30
公開日2023-05-10
最終更新日2023-05-24
実験手法ELECTRON MICROSCOPY (3.3 Å)
主引用文献Lipid flipping in the omega-3 fatty-acid transporter.
Nat Commun, 14, 2023
8D2S
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BU of 8d2s by Molmil
Zebrafish MFSD2A isoform B in inward open ligand bound conformation
分子名称: DODECYL-BETA-D-MALTOSIDE, FAB heavy chain, FAB light chain, ...
著者Nguyen, C, Lei, H.T, Lai, L.T.F, Gallentino, M.J, Mu, X, Matthies, D, Gonen, T.
登録日2022-05-30
公開日2023-05-10
最終更新日2023-05-24
実験手法ELECTRON MICROSCOPY (2.9 Å)
主引用文献Lipid flipping in the omega-3 fatty-acid transporter.
Nat Commun, 14, 2023
8D2W
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BU of 8d2w by Molmil
Zebrafish MFSD2A isoform B in inward open ligand 2B conformation
分子名称: DODECYL-BETA-D-MALTOSIDE, FAB heavy chain, FAB light chain, ...
著者Nguyen, C, Lei, H.T, Lai, L.T.F, Gallentino, M.J, Mu, X, Matthies, D, Gonen, T.
登録日2022-05-30
公開日2023-05-10
最終更新日2023-05-24
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Lipid flipping in the omega-3 fatty-acid transporter.
Nat Commun, 14, 2023
8D2T
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BU of 8d2t by Molmil
Zebrafish MFSD2A isoform B in inward open ligand-free conformation
分子名称: DODECYL-BETA-D-MALTOSIDE, FAB heavy chain, FAB light chain, ...
著者Nguyen, C, Lei, H.T, Lai, L.T.F, Gallentino, M.J, Mu, X, Matthies, D, Gonen, T.
登録日2022-05-30
公開日2023-05-10
最終更新日2023-05-24
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Lipid flipping in the omega-3 fatty-acid transporter.
Nat Commun, 14, 2023
8D2X
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BU of 8d2x by Molmil
Zebrafish MFSD2A isoform B in inward open ligand 3C conformation
分子名称: DODECYL-BETA-D-MALTOSIDE, FAB heavy chain, FAB light chain, ...
著者Nguyen, C, Lei, H.T, Lai, L.T.F, Gallentino, M.J, Mu, X, Matthies, D, Gonen, T.
登録日2022-05-30
公開日2023-05-10
最終更新日2023-05-24
実験手法ELECTRON MICROSCOPY (3.4 Å)
主引用文献Lipid flipping in the omega-3 fatty-acid transporter.
Nat Commun, 14, 2023
3J4R
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BU of 3j4r by Molmil
Pseudo-atomic model of the AKAP18-PKA Complex in a linear conformation derived from electron microscopy
分子名称: A-kinase anchor protein 18, cAMP-dependent protein kinase catalytic subunit alpha, cAMP-dependent protein kinase type II-alpha regulatory subunit
著者Reichow, S.L, Gonen, T.
登録日2013-09-25
公開日2013-11-13
最終更新日2024-02-21
実験手法ELECTRON MICROSCOPY (35 Å)
主引用文献Intrinsic disorder within an AKAP-protein kinase A complex guides local substrate phosphorylation.
Elife, 2, 2013
3J4Q
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BU of 3j4q by Molmil
Pseudo-atomic model of the AKAP18-PKA complex in a bent conformation derived from electron microscopy
分子名称: A-kinase anchor protein 18, cAMP-dependent protein kinase catalytic subunit alpha, cAMP-dependent protein kinase type II-alpha regulatory subunit
著者Reichow, S.L, Gonen, T.
登録日2013-09-25
公開日2013-11-13
最終更新日2024-02-21
実験手法ELECTRON MICROSCOPY (35 Å)
主引用文献Intrinsic disorder within an AKAP-protein kinase A complex guides local substrate phosphorylation.
Elife, 2, 2013
8FYN
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BU of 8fyn by Molmil
MicroED structure of A2A from plasma milled lamellae
分子名称: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, (2S)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, 4-{2-[(7-amino-2-furan-2-yl[1,2,4]triazolo[1,5-a][1,3,5]triazin-5-yl)amino]ethyl}phenol, ...
著者Martynowycz, M.W, Shiriaeva, A, Clabbers, M.T.B, Nicolas, W.J, Weaver, S.J, Hattne, J, Gonen, T.
登録日2023-01-26
公開日2023-03-08
最終更新日2023-03-22
実験手法ELECTRON CRYSTALLOGRAPHY (2 Å)
主引用文献A robust approach for MicroED sample preparation of lipidic cubic phase embedded membrane protein crystals.
Nat Commun, 14, 2023
7SW4
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BU of 7sw4 by Molmil
MicroED structure of proteinase K from a 540 nm thick lamella measured at 200 kV
分子名称: Proteinase K
著者Martynowycz, M.W, Clabbers, M.T.B, Unge, J, Hattne, J, Gonen, T.
登録日2021-11-19
公開日2022-09-07
最終更新日2023-10-18
実験手法ELECTRON CRYSTALLOGRAPHY (2.4 Å)
主引用文献Benchmarking the ideal sample thickness in cryo-EM.
Proc.Natl.Acad.Sci.USA, 118, 2021
7SW9
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BU of 7sw9 by Molmil
MicroED structure of proteinase K from a 170 nm thick lamella measured at 300 kV
分子名称: Proteinase K
著者Martynowycz, M.W, Clabbers, M.T.B, Unge, J, Hattne, J, Gonen, T.
登録日2021-11-19
公開日2022-09-07
最終更新日2023-10-18
実験手法ELECTRON CRYSTALLOGRAPHY (2.1 Å)
主引用文献Benchmarking the ideal sample thickness in cryo-EM.
Proc.Natl.Acad.Sci.USA, 118, 2021

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件を2024-07-17に公開中

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