7JSY
Proteinase K soaked with I3C determined by MicroED from a single milled microcrystal
Summary for 7JSY
| Entry DOI | 10.2210/pdb7jsy/pdb |
| EMDB information | 22463 |
| Descriptor | Proteinase K, 5-amino-2,4,6-triiodobenzene-1,3-dicarboxylic acid (3 entities in total) |
| Functional Keywords | proteinase k, hydrolase |
| Biological source | Parengyodontium album (Engyodontium album, Tritirachium album) |
| Total number of polymer chains | 1 |
| Total formula weight | 31166.12 |
| Authors | Martynowycz, M.W.,Gonen, T. (deposition date: 2020-08-16, release date: 2020-10-14, Last modification date: 2024-11-13) |
| Primary citation | Martynowycz, M.W.,Gonen, T. Ligand Incorporation into Protein Microcrystals for MicroED by On-Grid Soaking. Structure, 29:88-, 2021 Cited by PubMed Abstract: A high throughout method for soaking ligands into protein microcrystals on TEM grids is presented. Every crystal on the grid is soaked simultaneously using only standard cryoelectron microscopy vitrification equipment. The method is demonstrated using proteinase K microcrystals soaked with the 5-amino-2,4,6-triodoisophthalic acid (I3C) magic triangle. A soaked microcrystal is milled to a thickness of approximately 200 nm using a focused ion beam, and MicroED data are collected. A high-resolution structure of the protein with four ligands at high occupancy is determined. Both the number of ligands bound and their occupancy is higher using on-grid soaking of microcrystals compared with much larger crystals treated similarly and investigated by X-ray crystallography. These results indicate that on-grid soaking ligands into microcrystals results in efficient uptake of ligands into protein microcrystals. PubMed: 33007196DOI: 10.1016/j.str.2020.09.003 PDB entries with the same primary citation |
| Experimental method | ELECTRON CRYSTALLOGRAPHY (1.78 Å) |
Structure validation
Download full validation report
