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PDB: 131 results

8VXQ
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BU of 8vxq by Molmil
Cryo-EM structure of phage DEV ejection proteins gp72:gp73
Descriptor: N4 gp52-like protein, gp72
Authors:Iglesias, S.M, Cingolani, G.
Deposit date:2024-02-05
Release date:2024-04-03
Last modified:2024-10-16
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Integrative structural analysis of Pseudomonas phage DEV reveals a genome ejection motor.
Nat Commun, 15, 2024
5JJ3
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BU of 5jj3 by Molmil
Refined Structure of the Mature Virion Conformation of P22 Portal Protein
Descriptor: Portal protein
Authors:Lokareddy, R.K, Sankhala, R.S, Cingolani, G.
Deposit date:2016-04-22
Release date:2017-02-08
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (7 Å)
Cite:Portal protein functions akin to a DNA-sensor that couples genome-packaging to icosahedral capsid maturation.
Nat Commun, 8, 2017
1Y2A
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BU of 1y2a by Molmil
Structure of mammalian importin bound to the non-classical PLSCR1-NLS
Descriptor: Importin alpha-2 Subunit, decamer fragment of Phospholipid scramblase 1
Authors:Chen, M.-H, Ben-Efraim, I, Mitrousis, G, Walker-Kopp, N, Sims, P.J, Cingolani, G.
Deposit date:2004-11-22
Release date:2005-02-01
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Phospholipid Scramblase 1 Contains a Nonclassical Nuclear Localization Signal with Unique Binding Site in Importin alpha
J.Biol.Chem., 280, 2005
9BGM
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BU of 9bgm by Molmil
Pseudomonas phage DEV neck and tail (portal, head-to-tail and tail tube proteins)
Descriptor: gp75 tail tube, gp80 portal protein, gp83 head-to-tail
Authors:Iglesias, S.M, Hou, C.-F.D, Li, F, Cingolani, G.
Deposit date:2024-04-19
Release date:2024-09-04
Last modified:2024-10-16
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Integrative structural analysis of Pseudomonas phage DEV reveals a genome ejection motor.
Nat Commun, 15, 2024
9B42
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BU of 9b42 by Molmil
Pseudomonas phage Pa193 neck and extended tail (collar, gateway, tail tube, and sheath proteins)
Descriptor: gp29 Collar, gp30 Gateway, gp32 Sheath, ...
Authors:Iglesias, S.M, Cingolani, G.
Deposit date:2024-03-20
Release date:2024-10-16
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Cryo-EM analysis of Pseudomonas phage Pa193 structural components.
Commun Biol, 7, 2024
9B41
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BU of 9b41 by Molmil
Pseudomonas phage Pa193 Neck (portal and head-to-tail proteins)
Descriptor: gp19 Portal, gp28 Head-to-tail protein
Authors:Iglesias, S.M, Cingolani, G.
Deposit date:2024-03-20
Release date:2024-10-16
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Cryo-EM analysis of Pseudomonas phage Pa193 structural components.
Commun Biol, 7, 2024
9BGN
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BU of 9bgn by Molmil
Pseudomonas phage DEV 5-fold vertex (major coat protein)
Descriptor: gp77 major coat protein
Authors:Iglesias, S.M, Hou, C.F.D, Li, F, Cingolani, G.
Deposit date:2024-04-19
Release date:2024-09-04
Last modified:2024-10-16
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Integrative structural analysis of Pseudomonas phage DEV reveals a genome ejection motor.
Nat Commun, 15, 2024
9B45
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BU of 9b45 by Molmil
Pseudomonas phage Pa193 baseplate complex and tail fiber
Descriptor: gp34 helical bundle, gp35 Sheath initiator, gp37 Baseplate tube, ...
Authors:Iglesias, S.M, Cingolani, G.
Deposit date:2024-03-20
Release date:2024-10-16
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Cryo-EM analysis of Pseudomonas phage Pa193 structural components.
Commun Biol, 7, 2024
9B40
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BU of 9b40 by Molmil
Pseudomonas phage Pa193 5-fold vertex (capsid, decorating, and scaffolding proteins)
Descriptor: gp24 Scaffolding protein, gp25 Decorating protein, gp26 Major capsid
Authors:Iglesias, S.M, Cingolani, G.
Deposit date:2024-03-20
Release date:2024-10-16
Method:ELECTRON MICROSCOPY (2.9 Å)
Cite:Cryo-EM analysis of Pseudomonas phage Pa193 structural components.
Commun Biol, 7, 2024
5JJ1
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BU of 5jj1 by Molmil
Structure of the Immature Procapsid Conformation of P22 Portal Protein
Descriptor: Portal protein
Authors:Lokareddy, R.K, Cingolani, G.
Deposit date:2016-04-22
Release date:2017-02-08
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Portal protein functions akin to a DNA-sensor that couples genome-packaging to icosahedral capsid maturation.
Nat Commun, 8, 2017
4DKW
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BU of 4dkw by Molmil
Structure of P22 Large terminase nuclease domain
Descriptor: Large terminase protein, MAGNESIUM ION, SULFATE ION
Authors:Roy, A, Cingolani, G.
Deposit date:2012-02-04
Release date:2012-06-27
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.02 Å)
Cite:Structure of p22 headful packaging nuclease.
J.Biol.Chem., 287, 2012
9BGO
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BU of 9bgo by Molmil
Pseudomonas phage DEV gp72 ejection protein (pre-ejection conformation)
Descriptor: gp72
Authors:Iglesias, S.M, Hou, C.F.D, Li, F, Cingolani, G.
Deposit date:2024-04-19
Release date:2024-09-04
Last modified:2024-10-16
Method:ELECTRON MICROSCOPY (4.2 Å)
Cite:Integrative structural analysis of Pseudomonas phage DEV reveals a genome ejection motor.
Nat Commun, 15, 2024
9COD
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BU of 9cod by Molmil
C15 symmetrized DEV collar
Descriptor: SGNH hydrolase-type esterase domain-containing protein
Authors:Iglesias, S.M, Hou, C.F.D, Li, F, Cingolani, G.
Deposit date:2024-07-16
Release date:2024-10-16
Method:ELECTRON MICROSCOPY (4.7 Å)
Cite:Integrative structural analysis of Pseudomonas phage DEV reveals a genome ejection motor.
Nat Commun, 15, 2024
2RF6
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BU of 2rf6 by Molmil
Crystal Structure of the Vaccinia Virus Dual-Specificity Phosphatase VH1
Descriptor: Dual specificity protein phosphatase, SULFATE ION
Authors:Koksal, A.C, Cingolani, G.
Deposit date:2007-09-28
Release date:2008-09-30
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Crystal Structure of the Vaccinia Virus Dual-Specificity Phosphatase VH1
To be Published
6E3D
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BU of 6e3d by Molmil
Atomic structure of Mycobacterium tuberculosis DppA
Descriptor: Periplasmic dipeptide-binding lipoprotein DPPA, tetra-peptide picked up from the expression host
Authors:Ko, Y, Mitra, A, Niederweis, M, Cingolani, G.
Deposit date:2018-07-13
Release date:2019-09-11
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.271 Å)
Cite:Heme and hemoglobin utilization by Mycobacterium tuberculosis.
Nat Commun, 10, 2019
3TJ3
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BU of 3tj3 by Molmil
Structure of importin a5 bound to the N-terminus of Nup50
Descriptor: Importin subunit alpha-1, Nuclear pore complex protein Nup50
Authors:Pumroy, R, Nardozzi, J.D, Hart, D.J, Root, M.J, Cingolani, G.
Deposit date:2011-08-23
Release date:2011-11-30
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.702 Å)
Cite:Nucleoporin Nup50 stabilizes closed conformation of armadillo repeat 10 in importin alpha 5.
J.Biol.Chem., 287, 2012
4R30
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BU of 4r30 by Molmil
Structure of human laforin dual specificity phosphatase domain
Descriptor: BETA-MERCAPTOETHANOL, Laforin, SULFATE ION
Authors:Sankhala, R.S, Koksal, A.C, Cingolani, G.
Deposit date:2014-08-13
Release date:2014-12-31
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Dimeric quaternary structure of human laforin.
J.Biol.Chem., 290, 2015
5BVZ
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BU of 5bvz by Molmil
HK620 Tail Needle crystallized at pH 9 (Crystal form II)
Descriptor: CALCIUM ION, CHLORIDE ION, DNA stabilization protein
Authors:Bhardwaj, A, Cingolani, G.
Deposit date:2015-06-05
Release date:2015-06-24
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural Plasticity of the Protein Plug That Traps Newly Packaged Genomes in Podoviridae Virions.
J.Biol.Chem., 291, 2016
4EI2
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BU of 4ei2 by Molmil
Crystal Structures of MthK RCK gating ring bound to Barium
Descriptor: BARIUM ION, Calcium-gated potassium channel mthK
Authors:Smith, F.J, Cingolani, G, Rothberg, B.S.
Deposit date:2012-04-04
Release date:2012-12-19
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (3.108 Å)
Cite:Crystal Structure of a Ba(2+)-Bound Gating Ring Reveals Elementary Steps in RCK Domain Activation.
Structure, 20, 2012
8G5V
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BU of 8g5v by Molmil
Empty capsid of Hepatitis B virus
Descriptor: Core protein Cp183
Authors:Yang, R, Cingolani, G.
Deposit date:2023-02-14
Release date:2024-01-24
Last modified:2024-08-21
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Structural basis for nuclear import of hepatitis B virus (HBV) nucleocapsid core.
Sci Adv, 10, 2024
8G6V
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BU of 8g6v by Molmil
Hepatitis B virus capsid bound to importin alpha1/beta heterodimer
Descriptor: Core protein Cp183
Authors:Yang, R, Cingolani, G.
Deposit date:2023-02-16
Release date:2024-01-24
Last modified:2024-10-30
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Structural basis for nuclear import of hepatitis B virus (HBV) nucleocapsid core.
Sci Adv, 10, 2024
7JXT
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BU of 7jxt by Molmil
Ovine COX-1 in complex with the subtype-selective derivative 2a
Descriptor: 2-[4,5-bis(2-chlorophenyl)-1H-imidazol-2-yl]-6-(prop-2-en-1-yl)phenyl methoxyacetate, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, PROTOPORPHYRIN IX CONTAINING FE, ...
Authors:Ko, Y, Iaselli, M, Miciaccia, M, Friedrich, L, Schneider, G, Scilimati, A, Cingolani, G.
Deposit date:2020-08-27
Release date:2021-09-01
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (3.35 Å)
Cite:Learning from Nature: From a Marine Natural Product to Synthetic Cyclooxygenase-1 Inhibitors by Automated De Novo Design.
Adv Sci, 8, 2021
7UXE
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BU of 7uxe by Molmil
Pseudomonas phage E217 small terminase (TerS)
Descriptor: Small terminase
Authors:Lokareddy, R.K, Hou, C.-F.D, Doll, S.G, Li, F, Gillilan, R, Forti, F, Briani, F, Cingolani, G.
Deposit date:2022-05-05
Release date:2022-09-28
Last modified:2024-06-12
Method:ELECTRON MICROSCOPY (3.38 Å)
Cite:Terminase Subunits from the Pseudomonas-Phage E217.
J.Mol.Biol., 434, 2022
3LJ5
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BU of 3lj5 by Molmil
Full Length Bacteriophage P22 Portal Protein
Descriptor: Portal protein
Authors:Olia, A.S, Cingolani, G.
Deposit date:2010-01-25
Release date:2011-04-20
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (7.497 Å)
Cite:Three-dimensional structure of a viral genome-delivery portal vertex.
Nat.Struct.Mol.Biol., 18, 2011
8EON
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BU of 8eon by Molmil
Pseudomonas phage E217 baseplate complex
Descriptor: Baseplate component gp33, Baseplate component gp34, Baseplate component gp36, ...
Authors:Li, F, Cingolani, G, Hou, C.
Deposit date:2022-10-03
Release date:2023-07-26
Last modified:2024-06-19
Method:ELECTRON MICROSCOPY (3.6 Å)
Cite:High-resolution cryo-EM structure of the Pseudomonas bacteriophage E217.
Nat Commun, 14, 2023

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PDB entries from 2024-10-30

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