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PDB: 116 results

1H87
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BU of 1h87 by Molmil
Gadolinium derivative of tetragonal Hen Egg-White Lysozyme at 1.7 A resolution
Descriptor: 10-((2R)-2-HYDROXYPROPYL)-1,4,7,10-TETRAAZACYCLODODECANE 1,4,7-TRIACETIC ACID, CHLORIDE ION, GADOLINIUM ATOM, ...
Authors:Girard, E, Chantalat, L, Vicat, J, Kahn, R.
Deposit date:2001-01-25
Release date:2002-01-15
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.72 Å)
Cite:Gd-Hp-Do3A, a Complex to Obtain High-Phasing-Power Heavy Atom Derivatives for Sad and MAD Experiments. Results with Tetragonal Hen Egg-White Lysozyme
Acta Crystallogr.,Sect.D, 58, 2001
3ZG1
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BU of 3zg1 by Molmil
NI-BOUND FORM OF M123A MUTANT OF CUPRIAVIDUS METALLIDURANS CH34 CNRXS
Descriptor: CHLORIDE ION, DI(HYDROXYETHYL)ETHER, GLYCEROL, ...
Authors:Girard, E, Coves, J.
Deposit date:2012-12-13
Release date:2013-10-23
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Metal Sensing and Signal Transduction by Cnrx from Cupriavidus Metallidurans Ch34: Role of the Only Methionine Assessed by a Functional, Spectroscopic, and Theoretical Study
Metallomics, 6, 2014
2PKV
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BU of 2pkv by Molmil
D-(GGTATACC) ambient pressure
Descriptor: 5'-D(*GP*GP*TP*AP*TP*AP*CP*C)-3'
Authors:Girard, E, Prange, T, Kahn, R, Fourme, R.
Deposit date:2007-04-18
Release date:2007-07-24
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Adaptation of the base-paired double-helix molecular architecture to extreme pressure.
Nucleic Acids Res., 35, 2007
3TVM
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BU of 3tvm by Molmil
Structure of the mouse CD1d-SMC124-iNKT TCR complex
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Girardi, E, Li, Y, Zajonc, D.M.
Deposit date:2011-09-20
Release date:2012-02-01
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Glycolipids that Elicit IFN-gama-Biased Responses from Natural Killer T Cells
Chem.Biol., 18, 2011
5FKP
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BU of 5fkp by Molmil
Crystal structure of the mouse CD1d in complex with the p99 peptide
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, ANTIGEN-PRESENTING GLYCOPROTEIN CD1D1, BETA 2 MICROGLOBULIN, ...
Authors:Girardi, E, Wang, J, Zajonc, D.M.
Deposit date:2015-10-18
Release date:2016-03-30
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structure of an Alpha-Helical Peptide and Lipopeptide Bound to the Non-Classical Mhc Class I Molecule Cd1D
J.Biol.Chem., 291, 2016
5EFI
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BU of 5efi by Molmil
Crystal structure of mouse CD1d in complex with the p99p lipopeptide
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Antigen-presenting glycoprotein CD1d1, ...
Authors:Girardi, E, Wang, J, Zajonc, D.M.
Deposit date:2015-10-23
Release date:2016-03-30
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structure of an alpha-Helical Peptide and Lipopeptide Bound to the Nonclassical Major Histocompatibility Complex (MHC) Class I Molecule CD1d.
J.Biol.Chem., 291, 2016
3T1F
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BU of 3t1f by Molmil
Crystal structure of the mouse CD1d-Glc-DAG-s2 complex
Descriptor: (2S)-1-(alpha-D-glucopyranosyloxy)-3-(hexadecanoyloxy)propan-2-yl (11Z)-octadec-11-enoate, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Girardi, E, Zajonc, D.M.
Deposit date:2011-07-21
Release date:2011-09-21
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Invariant natural killer T cells recognize glycolipids from pathogenic Gram-positive bacteria.
Nat.Immunol., 12, 2011
2VUO
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BU of 2vuo by Molmil
Crystal structure of the rabbit IgG Fc fragment
Descriptor: AZIDE ION, FORMIC ACID, GLYCEROL, ...
Authors:Girardi, E, Holdom, M.D, Davies, A.M, Sutton, B.J, Beavil, A.J.
Deposit date:2008-05-27
Release date:2008-09-16
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:The Crystal Structure of Rabbit Igg-Fc.
Biochem.J., 417, 2009
3TA3
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BU of 3ta3 by Molmil
Structure of the mouse CD1d-Glc-DAG-s2-iNKT TCR complex
Descriptor: (2S)-1-(alpha-D-glucopyranosyloxy)-3-(hexadecanoyloxy)propan-2-yl (11Z)-octadec-11-enoate, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Girardi, E, Yu, E.D, Zajonc, D.M.
Deposit date:2011-08-03
Release date:2011-11-23
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Unique Interplay between Sugar and Lipid in Determining the Antigenic Potency of Bacterial Antigens for NKT Cells.
Plos Biol., 9, 2011
4ELM
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BU of 4elm by Molmil
Crystal structure of the mouse CD1d-lysosulfatide-Hy19.3 TCR complex
Descriptor: (2S,3R,4E)-2-amino-3-hydroxyoctadec-4-en-1-yl 3-O-sulfo-beta-D-galactopyranoside, 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Girardi, E, Maricic, I, Wang, J, Mac, T.T, Iyer, P, Kumar, V, Zajonc, D.M.
Deposit date:2012-04-11
Release date:2012-07-25
Last modified:2023-12-27
Method:X-RAY DIFFRACTION (3.48 Å)
Cite:Type II natural killer T cells use features of both innate-like and conventional T cells to recognize sulfatide self antigens.
Nat.Immunol., 13, 2012
4ELK
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BU of 4elk by Molmil
Crystal structure of the Hy19.3 type II NKT TCR
Descriptor: ACETATE ION, FORMIC ACID, Hy19.3 TCR alpha chain (mouse variable domain, ...
Authors:Girardi, E, Maricic, I, Wang, J, Mac, T.T, Iyer, P, Kumar, V, Zajonc, D.M.
Deposit date:2012-04-10
Release date:2012-07-25
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Type II natural killer T cells use features of both innate-like and conventional T cells to recognize sulfatide self antigens.
Nat.Immunol., 13, 2012
6QSS
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BU of 6qss by Molmil
Crystal Structure of Ignicoccus islandicus malate dehydrogenase co-crystallized with 10 mM Tb-Xo4
Descriptor: CHLORIDE ION, Malate dehydrogenase, TERBIUM(III) ION, ...
Authors:Roche, J, Girard, E, Madern, D.
Deposit date:2019-02-21
Release date:2019-07-17
Last modified:2024-01-24
Method:SOLUTION SCATTERING (1.892 Å), X-RAY DIFFRACTION
Cite:The archaeal LDH-like malate dehydrogenase from Ignicoccus islandicus displays dual substrate recognition, hidden allostery and a non-canonical tetrameric oligomeric organization.
J.Struct.Biol., 208, 2019
9END
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BU of 9end by Molmil
Crystal structure of Methanopyrus kandleri malate dehydrogenase mutant 3
Descriptor: CHLORIDE ION, Malate dehydrogenase, NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, ...
Authors:Coquille, S, Roche, J, Girard, E, Madern, D.
Deposit date:2024-03-12
Release date:2024-07-10
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Navigating the conformational landscape of an enzyme. Stabilization of a low populated conformer by evolutionary mutations triggers Allostery into a non-allosteric enzyme.
To be published
6BII
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BU of 6bii by Molmil
Crystal Structure of Pyrococcus yayanosii Glyoxylate Hydroxypyruvate Reductase in complex with NADP and malonate (re-refinement of 5AOW)
Descriptor: GLYCEROL, Glyoxylate reductase, MALONATE ION, ...
Authors:Lassalle, L, Shabalin, I.G, Girard, E, Minor, W.
Deposit date:2017-11-02
Release date:2018-01-17
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2 Å)
Cite:New insights into the mechanism of substrates trafficking in Glyoxylate/Hydroxypyruvate reductases.
Sci Rep, 6, 2016
4JMQ
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BU of 4jmq by Molmil
Crystal structure of pb9: The Dit of bacteriophage T5.
Descriptor: Bacteriophage T5 distal tail protein
Authors:Flayhan, A, Vellieux, F.M.D, Girard, E, Maury, O, Boulanger, P, Breyton, C.
Deposit date:2013-03-14
Release date:2013-11-06
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.895 Å)
Cite:Crystal Structure of pb9, the Distal Tail Protein of Bacteriophage T5: a Conserved Structural Motif among All Siphophages.
J.Virol., 88, 2014
2BH8
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BU of 2bh8 by Molmil
Combinatorial Protein 1b11
Descriptor: 1B11
Authors:De Bono, S, Riechmann, L, Girard, E, Williams, R.L, Winter, G.
Deposit date:2005-01-07
Release date:2005-02-07
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:A Segment of Cold Shock Protein Directs the Folding of a Combinatorial Protein
Proc.Natl.Acad.Sci.USA, 102, 2005
5AOV
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BU of 5aov by Molmil
Ternary Crystal Structure of Pyrococcus furiosus Glyoxylate Hydroxypyruvate Reductase in presence of glyoxylate
Descriptor: 1,2-ETHANEDIOL, ACETIC ACID, GLYOXYLATE REDUCTASE, ...
Authors:Lassalle, L, Girard, E.
Deposit date:2015-09-12
Release date:2016-03-02
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:New Insights Into the Mechanism of Substrates Trafficking in Glyoxylate/Hydroxypyruvate Reductases.
Sci.Rep., 6, 2016
2Y3G
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BU of 2y3g by Molmil
Se-Met form of Cupriavidus metallidurans CH34 CnrXs
Descriptor: CHLORIDE ION, GLYCEROL, NICKEL AND COBALT RESISTANCE PROTEIN CNRR, ...
Authors:Trepreau, J, Girard, E, Maillard, A.P, de Rosny, E, Petit-Haertlein, I, Kahn, R, Coves, J.
Deposit date:2010-12-20
Release date:2011-03-30
Last modified:2011-07-13
Method:X-RAY DIFFRACTION (1.91 Å)
Cite:Structural Basis for Metal Sensing by Cnrx.
J.Mol.Biol., 408, 2011
2Y3D
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BU of 2y3d by Molmil
Zn-bound form of Cupriavidus metallidurans CH34 CnrXs
Descriptor: CHLORIDE ION, NICKEL AND COBALT RESISTANCE PROTEIN CNRR, ZINC ION
Authors:Trepreau, J, Girard, E, Maillard, A.P, de Rosny, E, Petit-Haertlein, I, Kahn, R, Coves, J.
Deposit date:2010-12-20
Release date:2011-03-30
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structural Basis for Metal Sensing by Cnrx.
J.Mol.Biol., 408, 2011
2Y3H
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BU of 2y3h by Molmil
E63Q mutant of Cupriavidus metallidurans CH34 CnrXs
Descriptor: GLYCEROL, NICKEL AND COBALT RESISTANCE PROTEIN CNRR
Authors:Trepreau, J, Girard, E, Maillard, A.P, de Rosny, E, Petit-Haertlein, I, Kahn, R, Coves, J.
Deposit date:2010-12-20
Release date:2011-03-30
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (1.892 Å)
Cite:Structural Basis for Metal Sensing by Cnrx.
J.Mol.Biol., 408, 2011
2Y3B
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BU of 2y3b by Molmil
Co-bound form of Cupriavidus metallidurans CH34 CnrXs
Descriptor: COBALT (II) ION, GLYCEROL, NICKEL AND COBALT RESISTANCE PROTEIN CNRR
Authors:Trepreau, J, Girard, E, Maillard, A.P, de Rosny, E, Petit-Haertlein, I, Kahn, R, Coves, J.
Deposit date:2010-12-20
Release date:2011-03-30
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.554 Å)
Cite:Structural Basis for Metal Sensing by Cnrx.
J.Mol.Biol., 408, 2011
8P2Q
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BU of 8p2q by Molmil
Crystal structure of Hen Egg White Lysozyme co-crystallized with 10 mM TbXo4-OH
Descriptor: CHLORIDE ION, Lysozyme C, SODIUM ION, ...
Authors:Alsalman, Z, Girard, E.
Deposit date:2023-05-16
Release date:2024-06-05
Last modified:2024-07-17
Method:X-RAY DIFFRACTION (1.69 Å)
Cite:Influence of Chemical Modifications of the Crystallophore on Protein Nucleating Properties and Supramolecular Interactions Network.
Chemistry, 30, 2024
8POB
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BU of 8pob by Molmil
Crystal structure of Hen Egg White Lysozyme co-crystallized with 10 mM TbXo4-SO3
Descriptor: 6-[[4-[(6-carboxypyridin-2-yl)methyl]-7-(3-sulfopropyl)-1,4,7-triazonan-1-yl]methyl]pyridine-2-carboxylic acid, CHLORIDE ION, Lysozyme C, ...
Authors:Alsalman, Z, Girard, E.
Deposit date:2023-07-04
Release date:2024-07-10
Last modified:2024-07-17
Method:X-RAY DIFFRACTION (1.74 Å)
Cite:Influence of Chemical Modifications of the Crystallophore on Protein Nucleating Properties and Supramolecular Interactions Network.
Chemistry, 30, 2024
8PIW
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BU of 8piw by Molmil
Crystal structure of Hen Egg White Lysozyme co-crystallized with 10 mM TbXo4-NMet2
Descriptor: 6-[[4-[(6-carboxypyridin-2-yl)methyl]-7-[3-(dimethylamino)propyl]-1,4,7-triazonan-1-yl]methyl]pyridine-2-carboxylic acid, CHLORIDE ION, Lysozyme C, ...
Authors:Alsalman, Z, Girard, E.
Deposit date:2023-06-22
Release date:2024-07-10
Last modified:2024-07-17
Method:X-RAY DIFFRACTION (1.72 Å)
Cite:Influence of Chemical Modifications of the Crystallophore on Protein Nucleating Properties and Supramolecular Interactions Network.
Chemistry, 30, 2024
7ZQN
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BU of 7zqn by Molmil
d(CGCGCG)2 Z-DNA AT 5400 BARS (540 MPa)
Descriptor: DNA (5'-D(*CP*GP*CP*GP*CP*G)-3'), MAGNESIUM ION
Authors:Prange, T, Colloc'h, N, Girard, E.
Deposit date:2022-05-01
Release date:2023-03-08
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.41 Å)
Cite:Behavior of B- and Z-DNA Crystals under High Hydrostatic Pressure
Crystals, 2022

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PDB entries from 2024-08-21

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