Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 287 results

3NEI
DownloadVisualize
BU of 3nei by Molmil
Crystal structure of Precorrin-4 C11-methyltransferase from Rhodobacter capsulatus (no SAH bound)
Descriptor: GLYCEROL, Precorrin-4 C(11)-methyltransferase, SULFATE ION
Authors:Seyedarabi, A, Pickersgill, R.W.
Deposit date:2010-06-08
Release date:2011-06-15
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Crystal structure of Precorrin-4 C11-methyltransferase from Rhodobacter capsulatus (no SAH bound)
To be Published
3NDC
DownloadVisualize
BU of 3ndc by Molmil
Crystal structure of Precorrin-4 C11-methyltransferase from Rhodobacter capsulatus
Descriptor: Precorrin-4 C(11)-methyltransferase, S-ADENOSYL-L-HOMOCYSTEINE
Authors:Seyedarabi, A, Pickersgill, R.W.
Deposit date:2010-06-07
Release date:2011-06-15
Last modified:2023-11-01
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of Precorrin-4 C11-methyltransferase from Rhodobacter capsulatus
To be Published
7UXE
DownloadVisualize
BU of 7uxe by Molmil
Pseudomonas phage E217 small terminase (TerS)
Descriptor: Small terminase
Authors:Lokareddy, R.K, Hou, C.-F.D, Doll, S.G, Li, F, Gillilan, R, Forti, F, Briani, F, Cingolani, G.
Deposit date:2022-05-05
Release date:2022-09-28
Last modified:2024-06-12
Method:ELECTRON MICROSCOPY (3.38 Å)
Cite:Terminase Subunits from the Pseudomonas-Phage E217.
J.Mol.Biol., 434, 2022
8P2E
DownloadVisualize
BU of 8p2e by Molmil
Homotypic interacting B1 fab bound to Chondroitin Sulfate A
Descriptor: B1 fab heavy, B1 fab light
Authors:Raghavan, S.S.R, Dagil, R, Wang, K.T, Salanti, A.
Deposit date:2023-05-16
Release date:2024-06-05
Last modified:2024-09-11
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:Tumor-agnostic cancer therapy using antibodies targeting oncofetal chondroitin sulfate.
Nat Commun, 15, 2024
4HTG
DownloadVisualize
BU of 4htg by Molmil
Porphobilinogen Deaminase from Arabidopsis Thaliana
Descriptor: 3-[(5Z)-5-{[3-(2-carboxyethyl)-4-(carboxymethyl)-5-methyl-1H-pyrrol-2-yl]methylidene}-4-(carboxymethyl)-2-oxo-2,5-dihydro-1H-pyrrol-3-yl]propanoic acid, ACETATE ION, Porphobilinogen deaminase, ...
Authors:Roberts, A, Gill, R, Hussey, R.J, Erskine, P.T, Cooper, J.B, Wood, S.P, Chrystal, E.J.T, Shoolingin-Jordan, P.M.
Deposit date:2012-11-01
Release date:2013-02-27
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.45 Å)
Cite:Insights into the mechanism of pyrrole polymerization catalysed by porphobilinogen deaminase: high-resolution X-ray studies of the Arabidopsis thaliana enzyme.
Acta Crystallogr.,Sect.D, 69, 2013
8OPP
DownloadVisualize
BU of 8opp by Molmil
Structure of human terminal uridylyltransferase 7 (hTUT7/ZCCHC6) bound with pre-let7g miRNA and UTPalphaS
Descriptor: RNA (25-MER), Terminal uridylyltransferase 7, [[(2~{R},3~{S},4~{R},5~{R})-5-[2,4-bis(oxidanylidene)pyrimidin-1-yl]-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-sulfanyl-phosphoryl] phosphono hydrogen phosphate
Authors:Yi, G, Ye, M, Gilbert, R.J.
Deposit date:2023-04-07
Release date:2024-07-24
Last modified:2024-09-25
Method:ELECTRON MICROSCOPY (3.76 Å)
Cite:Structural basis for activity switching in polymerases determining the fate of let-7 pre-miRNAs.
Nat.Struct.Mol.Biol., 31, 2024
4FBY
DownloadVisualize
BU of 4fby by Molmil
fs X-ray diffraction of Photosystem II
Descriptor: 1,2-DI-O-ACYL-3-O-[6-DEOXY-6-SULFO-ALPHA-D-GLUCOPYRANOSYL]-SN-GLYCEROL, 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE, ...
Authors:Kern, J, Alonso-Mori, R, Hellmich, J, Tran, R, Hattne, J, Laksmono, H, Gloeckner, C, Echols, N, Sierra, R.G, Sellberg, J, Lassalle-Kaiser, B, Gildea, R.J, Glatzel, P, Grosse-Kunstleve, R.W, Latimer, M.J, Mcqueen, T.A, Difiore, D, Fry, A.R, Messerschmidt, M.M, Miahnahri, A, Schafer, D.W, Seibert, M.M, Sokaras, D, Weng, T.-C, Zwart, P.H, White, W.E, Adams, P.D, Bogan, M.J, Boutet, S, Williams, G.J, Messinger, J, Sauter, N.K, Zouni, A, Bergmann, U, Yano, J, Yachandra, V.K.
Deposit date:2012-05-23
Release date:2012-06-20
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (6.56 Å)
Cite:Room temperature femtosecond X-ray diffraction of photosystem II microcrystals.
Proc.Natl.Acad.Sci.USA, 109, 2012
3NFT
DownloadVisualize
BU of 3nft by Molmil
Near-atomic resolution analysis of BipD- A component of the type-III secretion system of Burkholderia pseudomallei
Descriptor: Translocator protein bipD
Authors:Pal, M, Erskine, P.T, Gill, R.S, Wood, S.P, Cooper, J.B.
Deposit date:2010-06-10
Release date:2010-07-14
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.51 Å)
Cite:Near-atomic resolution analysis of BipD, a component of the type III secretion system of Burkholderia pseudomallei.
Acta Crystallogr.,Sect.F, 66, 2010
4FAY
DownloadVisualize
BU of 4fay by Molmil
Crystal structure of a trimeric bacterial microcompartment shell protein PduB with glycerol metabolites
Descriptor: ACETATE ION, GLYCEROL, Microcompartments protein
Authors:Pang, A.H, Prentice, M.B, Pickersgill, R.W.
Deposit date:2012-05-22
Release date:2012-11-21
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.56 Å)
Cite:Substrate channels revealed in the trimeric Lactobacillus reuteri bacterial microcompartment shell protein PduB.
Acta Crystallogr.,Sect.D, 68, 2012
1BTJ
DownloadVisualize
BU of 1btj by Molmil
HUMAN SERUM TRANSFERRIN, RECOMBINANT N-TERMINAL LOBE, APO FORM, CRYSTAL FORM 2
Descriptor: PROTEIN (SERUM TRANSFERRIN)
Authors:Jeffrey, P.D, Bewley, M.C, Macgillivray, R.T.A, Mason, A.B, Woodworth, R.C, Baker, E.N.
Deposit date:1998-09-01
Release date:1999-01-13
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Ligand-induced conformational change in transferrins: crystal structure of the open form of the N-terminal half-molecule of human transferrin.
Biochemistry, 37, 1998
2V5P
DownloadVisualize
BU of 2v5p by Molmil
COMPLEX STRUCTURE OF HUMAN IGF2R DOMAINS 11-13 BOUND TO IGF-II
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CATION-INDEPENDENT MANNOSE-6-PHOSPHATE RECEPTOR, INSULIN-LIKE GROWTH FACTOR II, ...
Authors:Brown, J, Delaine, C, Zaccheo, O.J, Siebold, C, Gilbert, R.J, van Boxel, G, Denley, A, Wallace, J.C, Hassan, A.B, Forbes, B.E, Jones, E.Y.
Deposit date:2007-07-06
Release date:2007-12-11
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (4.1 Å)
Cite:Structure and Functional Analysis of the Igf-II/Igf2R Interaction
Embo J., 27, 2008
1BP5
DownloadVisualize
BU of 1bp5 by Molmil
HUMAN SERUM TRANSFERRIN, RECOMBINANT N-TERMINAL LOBE, APO FORM
Descriptor: PROTEIN (SERUM TRANSFERRIN)
Authors:Jeffrey, P.D, Bewley, M.C, Macgillivray, R.T.A, Mason, A.B, Woodworth, R.C, Baker, E.N.
Deposit date:1998-08-12
Release date:1999-01-13
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Ligand-induced conformational change in transferrins: crystal structure of the open form of the N-terminal half-molecule of human transferrin.
Biochemistry, 37, 1998
2VSM
DownloadVisualize
BU of 2vsm by Molmil
Nipah virus attachment glycoprotein in complex with human cell surface receptor ephrinB2
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, EPHRIN-B2, HEMAGGLUTININ-NEURAMINIDASE, ...
Authors:Bowden, T.A, Aricescu, A.R, Gilbert, R.J, Grimes, J.M, Jones, E.Y, Stuart, D.I.
Deposit date:2008-04-25
Release date:2008-05-20
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structural Basis of Nipah and Hendra Virus Attachment to Their Cell-Surface Receptor Ephrin-B2
Nat.Struct.Mol.Biol., 15, 2008
2V5N
DownloadVisualize
BU of 2v5n by Molmil
STRUCTURE OF HUMAN IGF2R DOMAINS 11-12
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CATION-INDEPENDENT MANNOSE-6-PHOSPHATE RECEPTOR
Authors:Brown, J, Delaine, C, Zaccheo, O.J, Siebold, C, Gilbert, R.J, van Boxel, G, Denley, A, Wallace, J.C, Hassan, A.B, Forbes, B.E, Jones, E.Y.
Deposit date:2007-07-06
Release date:2007-12-11
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Structure and Functional Analysis of the Igf-II/Igf2R Interaction
Embo J., 27, 2008
2V5O
DownloadVisualize
BU of 2v5o by Molmil
STRUCTURE OF HUMAN IGF2R DOMAINS 11-14
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, CATION-INDEPENDENT MANNOSE-6-PHOSPHATE RECEPTOR, CHLORIDE ION
Authors:Brown, J, Delaine, C, Zaccheo, O.J, Siebold, C, Gilbert, R.J, van Boxel, G, Denley, A, Wallace, J.C, Hassan, A.B, Forbes, B.E, Jones, E.Y.
Deposit date:2007-07-06
Release date:2007-12-11
Last modified:2023-12-13
Method:X-RAY DIFFRACTION (2.91 Å)
Cite:Structure and Functional Analysis of the Igf-II/Igf2R Interaction
Embo J., 27, 2008
1OEB
DownloadVisualize
BU of 1oeb by Molmil
Mona/Gads SH3C domain
Descriptor: CADMIUM ION, GRB2-RELATED ADAPTOR PROTEIN 2, LYMPHOCYTE CYTOSOLIC PROTEIN 2
Authors:Harkiolaki, M, Lewitzky, M, Gilbert, R.J.C, Jones, E.Y, Bourette, R.P, Mouchiroud, G, Sondermann, H, Moarefi, I, Feller, S.M.
Deposit date:2003-03-24
Release date:2003-04-02
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (1.76 Å)
Cite:Structural Basis for SH3 Domain-Mediated High-Affinity Binding between Mona/Gads and Slp-76
Embo J., 22, 2003
2X44
DownloadVisualize
BU of 2x44 by Molmil
Structure of a strand-swapped dimeric form of CTLA-4
Descriptor: CYTOTOXIC T-LYMPHOCYTE PROTEIN 4
Authors:Sonnen, A.F.-P, Yu, C, Evans, E.J, Stuart, D.I, Davis, S.J, Gilbert, R.J.C.
Deposit date:2010-01-28
Release date:2010-04-07
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Domain Metastability: A Molecular Basis for Immunoglobulin Deposition?
J.Mol.Biol., 399, 2010
1J9Y
DownloadVisualize
BU of 1j9y by Molmil
Crystal structure of mannanase 26A from Pseudomonas cellulosa
Descriptor: MANNANASE A, ZINC ION
Authors:Hogg, D, Woo, E.-J, Bolam, D.N, McKie, V.A, Gilbert, H.J, Pickersgill, R.W.
Deposit date:2001-05-29
Release date:2001-06-20
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Crystal structure of mannanase 26A from Pseudomonas cellulosa and analysis of residues involved in substrate binding
J.Biol.Chem., 276, 2001
5J67
DownloadVisualize
BU of 5j67 by Molmil
Structure of Astrotactin-2, a conserved vertebrate-specific and perforin-like membrane protein involved in neuronal development
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Astrotactin-2, D-MYO-INOSITOL-1,4,5-TRIPHOSPHATE, ...
Authors:Ni, T, Harlos, K, Gilbert, R.J.C.
Deposit date:2016-04-04
Release date:2016-05-25
Last modified:2020-07-29
Method:X-RAY DIFFRACTION (3.16 Å)
Cite:Structure of astrotactin-2: a conserved vertebrate-specific and perforin-like membrane protein involved in neuronal development.
Open Biology, 6, 2016
1B3E
DownloadVisualize
BU of 1b3e by Molmil
HUMAN SERUM TRANSFERRIN, N-TERMINAL LOBE, EXPRESSED IN PICHIA PASTORIS
Descriptor: CARBONATE ION, FE (III) ION, PROTEIN (SERUM TRANSFERRIN)
Authors:Bewley, M.C, Tam, B.M, Grewal, J, He, S, Shewry, S, Murphy, M.E.P, Mason, A.B, Woodworth, R.C, Baker, E.N, Macgillivray, R.T.A.
Deposit date:1998-12-09
Release date:1999-03-26
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:X-ray crystallography and mass spectroscopy reveal that the N-lobe of human transferrin expressed in Pichia pastoris is folded correctly but is glycosylated on serine-32.
Biochemistry, 38, 1999
5C4N
DownloadVisualize
BU of 5c4n by Molmil
CobK precorrin-6A reductase
Descriptor: NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE, Precorrin-6A reductase
Authors:Gu, S, Pickersgill, R.W.
Deposit date:2015-06-18
Release date:2015-12-09
Last modified:2017-08-30
Method:X-RAY DIFFRACTION (1.63 Å)
Cite:Crystal structure of CobK
To Be Published
7PLN
DownloadVisualize
BU of 7pln by Molmil
Structure of the APCbeta domain of Plasmodium vivax perforin-like protein 1
Descriptor: Sporozoite micronemal protein essential for cell traversal, putative
Authors:Williams, S.I, Ni, T, Yu, X, Gilbert, R.J.C.
Deposit date:2021-08-31
Release date:2022-06-29
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (3.15 Å)
Cite:Structural, Functional and Computational Studies of Membrane Recognition by Plasmodium Perforin-Like Proteins 1 and 2
J.Mol.Biol., 434, 2022
5L56
DownloadVisualize
BU of 5l56 by Molmil
Plexin A1 full extracellular region, domains 1 to 10, to 4 angstrom
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Plexin-A1, alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]alpha-D-mannopyranose-(1-6)-[alpha-D-mannopyranose-(1-3)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ...
Authors:Janssen, B.J.C, Kong, Y, Malinauskas, T, Vangoor, V.R, Coles, C.H, Kaufmann, R, Ni, T, Gilbert, R.J.C, Padilla-Parra, S, Pasterkamp, R.J, Jones, E.Y.
Deposit date:2016-05-28
Release date:2016-07-06
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (4 Å)
Cite:Structural Basis for Plexin Activation and Regulation.
Neuron, 91, 2016
5AMV
DownloadVisualize
BU of 5amv by Molmil
Structural insights into the loss of catalytic competence in pectate lyase at low pH
Descriptor: ACETATE ION, CALCIUM ION, GLYCEROL, ...
Authors:Teixeira, S.C.M, Ali, S, Sondergaard, C, Pickersgill, R.
Deposit date:2015-09-02
Release date:2015-09-30
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.57 Å)
Cite:Structural Insights Into the Loss of Catalytic Competence in Pectate Lyase Activity at Low Ph.
FEBS Lett., 589, 2015
5C4R
DownloadVisualize
BU of 5c4r by Molmil
CobK precorrin-6A reductase
Descriptor: Precorrin-6A reductase
Authors:Gu, S, Pickersgill, R.W.
Deposit date:2015-06-18
Release date:2016-11-16
Last modified:2017-08-30
Method:X-RAY DIFFRACTION (3.17 Å)
Cite:Crystal structure of CobK reveals strand-swapping between Rossmann-fold domains and molecular basis of the reduced precorrin product trap.
Sci Rep, 5, 2015

225946

PDB entries from 2024-10-09

PDB statisticsPDBj update infoContact PDBjnumon