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PDB: 68 件
2PLF
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BU of 2plf by Molmil
The structure of aIF2gamma subunit from the archaeon Sulfolobus solfataricus in the nucleotide-free form.
分子名称: Translation initiation factor 2 gamma subunit
著者Nikonov, O.S, Stolboushkina, E.A, Nikulin, A.D, Hasenohrl, D, Blaesi, U, Manstein, D.J, Fedorov, R.V, Garber, M.B, Nikonov, S.V.
登録日2007-04-19
公開日2007-11-06
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献New Insights into the Interactions of the Translation Initiation Factor 2 from Archaea with Guanine Nucleotides and Initiator tRNA.
J.Mol.Biol., 373, 2007
5D6G
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BU of 5d6g by Molmil
CRYSTAL STRUCTURE OF FRAGMENT OF RIBOSOMAL PROTEIN P0 IN COMPLEX WITH 74NT 23S RNA FROM METHANOCOCCUS JANNASCHII
分子名称: 23S ribosomal RNA, 50S ribosomal protein L10, MAGNESIUM ION
著者Gabdulkhakov, A.G, Mitroshin, I.V, Garber, M.B.
登録日2015-08-12
公開日2016-09-14
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (3.3 Å)
主引用文献CRYSTAL STRUCTURE OF FRAGMENT OF RIBOSOMAL PROTEIN P0 IN COMPLEX WITH 74NT 23S RNA FROM METHANOCOCCUS JANNASCHII
To Be Published
4RJL
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BU of 4rjl by Molmil
Gamma subunit of the translation initiation factor 2 from Sulfolobus solfataricus complexed with GDPCP
分子名称: 2,5,8,11,14,17,20,23-OCTAOXAPENTACOSAN-25-OL, FORMIC ACID, MAGNESIUM ION, ...
著者Kravchenko, O.V, Nikonov, O.S, Arhipova, V.I, Stolboushkina, E.A, Gabdulkhakov, A.G, Nikulin, A.D, Garber, M.B, Nikonov, S.V.
登録日2014-10-09
公開日2015-11-11
最終更新日2023-09-20
実験手法X-RAY DIFFRACTION (1.6401 Å)
主引用文献Crystal structure of gamma subunit of the translation initiation factor 2 from Sulfolobus solfataricus in complex with GDPCP at 1.64A resolution
To be Published
3CW2
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BU of 3cw2 by Molmil
Crystal structure of the intact archaeal translation initiation factor 2 from Sulfolobus solfataricus .
分子名称: Translation initiation factor 2 subunit alpha, Translation initiation factor 2 subunit beta, Translation initiation factor 2 subunit gamma
著者Stolboushkina, E.A, Nikonov, S.V, Nikulin, A.D, Blaesi, U, Manstein, D.J, Fedorov, R.V, Garber, M.B, Nikonov, O.S.
登録日2008-04-21
公開日2009-01-06
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献Crystal structure of the intact archaeal translation initiation factor 2 demonstrates very high conformational flexibility in the alpha- and beta-subunits.
J.Mol.Biol., 382, 2008
5VYC
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BU of 5vyc by Molmil
Crystal structure of the human 40S ribosomal subunit in complex with DENR-MCT-1.
分子名称: 40S ribosomal protein S10, 40S ribosomal protein S11, 40S ribosomal protein S12, ...
著者Lomakin, I.B, Stolboushkina, E.A, Vaidya, A.T, Garber, M.B, Dmitriev, S.E, Steitz, T.A.
登録日2017-05-24
公開日2017-07-19
最終更新日2023-10-04
実験手法X-RAY DIFFRACTION (6 Å)
主引用文献Crystal Structure of the Human Ribosome in Complex with DENR-MCT-1.
Cell Rep, 20, 2017
5NPM
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BU of 5npm by Molmil
CRYSTAL STRUCTURE OF MUTANT RIBOSOMAL PROTEIN TTHL1 LACKING 8 N-TERMINAL RESIDUES IN COMPLEX WITH 80NT 23S RNA FROM THERMUS THERMOPHILUS
分子名称: 23S ribosomal RNA, 50S ribosomal protein L1, MALONATE ION, ...
著者Gabdulkhakov, A.G, Tishchenko, T.V, Nevskaya, N.A, Nikonov, S.V, Garber, M.B.
登録日2017-04-17
公開日2018-05-16
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2.7 Å)
主引用文献[Influence of Nonconserved Regions of L1 Protuberance of Thermus thermophilus Ribosome on the Affinity of L1 Protein to 23s rRNA].
Mol.Biol.(Moscow), 52, 2018
3INZ
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BU of 3inz by Molmil
H57T Hfq from Pseudomonas aeruginosa
分子名称: CADMIUM ION, CHLORIDE ION, Protein hfq, ...
著者Moskaleva, O, Melnik, B, Gabdulkhakov, A, Garber, M, Nikonov, S, Stolboushkina, E, Nikulin, A.
登録日2009-08-13
公開日2010-08-04
最終更新日2023-09-06
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献The structures of mutant forms of Hfq from Pseudomonas aeruginosa reveal the importance of the conserved His57 for the protein hexamer organization.
Acta Crystallogr.,Sect.F, 66, 2010
6H6K
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BU of 6h6k by Molmil
The structure of the FKR mutant of the archaeal translation initiation factor 2 gamma subunit in complex with GDPCP, obtained in the absence of magnesium salts in the crystallization solution.
分子名称: 1,2-ETHANEDIOL, PHOSPHOMETHYLPHOSPHONIC ACID GUANYLATE ESTER, SODIUM ION, ...
著者Nikonov, O, Kravchenko, O, Nevskaya, N, Stolboushkina, E, Gabdulkhakov, A, Garber, M, Nikonov, S.
登録日2018-07-27
公開日2019-04-17
最終更新日2024-01-17
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献The third structural switch in the archaeal translation initiation factor 2 (aIF2) molecule and its possible role in the initiation of GTP hydrolysis and the removal of aIF2 from the ribosome.
Acta Crystallogr D Struct Biol, 75, 2019
6I5M
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BU of 6i5m by Molmil
Gamma subunit of the translation initiation factor 2 from Sulfolobus solfataricus in complex with GDP and formate ion
分子名称: FORMIC ACID, GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, ...
著者Kravchenko, O, Nikonov, O, Gabdulkhakov, A, Stolboushkina, E, Arkhipova, V, Garber, M, Nikonov, S.
登録日2018-11-13
公開日2019-01-02
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.4 Å)
主引用文献The third structural switch in the archaeal translation initiation factor 2 (aIF2) molecule and its possible role in the initiation of GTP hydrolysis and the removal of aIF2 from the ribosome.
Acta Crystallogr D Struct Biol, 75, 2019
4M0L
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BU of 4m0l by Molmil
Gamma subunit of the translation initiation factor 2 from Sulfolobus solfataricus complexed with GDP
分子名称: GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, PHOSPHATE ION, ...
著者Nikonov, O.S, Stolboushkina, E.A, Arkhipova, V.I, Gabdulkhakov, A.G, Nikulin, A.D, Lazopulo, A.M, Lazopulo, S.M, Garber, M.B, Nikonov, S.V.
登録日2013-08-01
公開日2013-08-28
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.6 Å)
主引用文献Conformational transitions in the gamma subunit of the archaeal translation initiation factor 2.
Acta Crystallogr.,Sect.D, 70, 2014
4M53
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BU of 4m53 by Molmil
Gamma subunit of the translation initiation factor 2 from Sulfolobus solfataricus in complex with GDPCP
分子名称: BETA-MERCAPTOETHANOL, FORMIC ACID, MAGNESIUM ION, ...
著者Nikonov, O.S, Stolboushkina, E.A, Arkhipova, V.I, Lazopulo, A.M, Lazopulo, S.M, Gabdulkhakov, A.G, Nikulin, A.D, Garber, M.B, Nikonov, S.V.
登録日2013-08-07
公開日2013-08-28
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2 Å)
主引用文献Conformational transitions in the gamma subunit of the archaeal translation initiation factor 2.
Acta Crystallogr.,Sect.D, 70, 2014
5DAR
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BU of 5dar by Molmil
CRYSTAL STRUCTURE OF THE BASE OF THE RIBOSOMAL P STALK FROM METHANOCOCCUS JANNASCHII
分子名称: 50S ribosomal protein L10, 50S ribosomal protein L11, 74 nt fragment of 23S rRNA, ...
著者Gabdulkhakov, A.G, Mitroshin, I.V, Garber, M.B.
登録日2015-08-20
公開日2016-09-14
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.9 Å)
主引用文献CRYSTAL STRUCTURE OF THE BASE OF THE RIBOSOMAL P STALK FROM METHANOCOCCUS JANNASCHII
To Be Published
6QKD
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BU of 6qkd by Molmil
CRYSTAL STRUCTURE OF vhh-based FAB-fragment of antibody BCD-085
分子名称: CHLORIDE ION, FAB HEAVY CHAIN, FAB LIGHT CHAIN, ...
著者Kostareva, O.S, Kolyadenko, I.A, Ulitin, A.B, Ekimova, V.M, Evdokimov, S.R, Garber, M.B, Tishchenko, T.V, Gabdulkhakov, A.G.
登録日2019-01-29
公開日2019-07-24
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献Fab Fragment of VHH-Based Antibody Netakimab: Crystal Structure and Modeling Interaction with Cytokine IL-17A
Crystals, 2019
2RFV
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BU of 2rfv by Molmil
High resolution structure of L-methionine gamma-lyase from Citrobacter freundii
分子名称: CHLORIDE ION, Methionine gamma-lyase
著者Nikulin, A.D, Revtovich, S.V, Morozova, E.A, Nevskaya, N.A, Nikonov, S.V, Garber, M.B, Demidkina, T.V.
登録日2007-10-02
公開日2008-08-19
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (1.355 Å)
主引用文献High-resolution structure of methionine gamma-lyase from Citrobacter freundii.
Acta Crystallogr.,Sect.D, 64, 2008
5D8H
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BU of 5d8h by Molmil
CRYSTAL STRUCTURE OF THE BASE OF THE RIBOSOMAL P STALK FROM METHANOCOCCUS JANNASCHII WITH ANTIBIOTIC THIOSTREPTON
分子名称: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 23S ribosomal RNA, 50S ribosomal protein L10, ...
著者Gabdulkhakov, A.G, Mitroshin, I.V, Garber, M.B.
登録日2015-08-17
公開日2016-08-24
最終更新日2019-04-24
実験手法X-RAY DIFFRACTION (2.8 Å)
主引用文献CRYSTAL STRUCTURE OF THE BASE OF THE RIBOSOMAL P STALK FROM METHANOCOCCUS JANNASCHII WITH ANTIBIOTIC THIOSTREPTON
To Be Published
4M2L
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BU of 4m2l by Molmil
Gamma subunit of the translation initiation factor 2 from Sulfolobus solfataricus in nucleotide-free form
分子名称: 1,2-ETHANEDIOL, PHOSPHATE ION, SULFATE ION, ...
著者Nikonov, O.S, Stolboushkina, E.A, Arkhipova, V.I, Gabdulkhakov, A.G, Nikulin, A.D, Garber, M.B, Nikonov, S.V.
登録日2013-08-05
公開日2014-03-12
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.149 Å)
主引用文献Conformational transitions in the gamma subunit of the archaeal translation initiation factor 2.
Acta Crystallogr.,Sect.D, 70, 2014
4M4S
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BU of 4m4s by Molmil
Gamma subunit of the translation initiation factor 2 from Sulfolobus solfataricus in complex with GDP and formate ion mimic aIF2gamma*GDP*Pi complex (a formate ion substitutes for Pi)
分子名称: FORMIC ACID, GUANOSINE-5'-DIPHOSPHATE, MAGNESIUM ION, ...
著者Nikonov, O.S, Stolboushkina, E.A, Arkhipova, V.I, Gabdulkhakov, A.G, Nikulin, A.D, Garber, M.B, Nikonov, S.V.
登録日2013-08-07
公開日2014-03-12
最終更新日2023-11-08
実験手法X-RAY DIFFRACTION (2.251 Å)
主引用文献Conformational transitions in the gamma subunit of the archaeal translation initiation factor 2.
Acta Crystallogr.,Sect.D, 70, 2014
2PMD
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BU of 2pmd by Molmil
The structures of aIF2gamma subunit from the archaeon Sulfolobus solfataricus in the GDP-bound form.
分子名称: GUANOSINE-5'-DIPHOSPHATE, PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER, PYROPHOSPHATE, ...
著者Nikonov, O.S, Stolboushkina, E.A, Nikulin, A.D, Hasenohrl, D, Blaesi, U, Manstein, D.J, Fedorov, R.V, Garber, M.B, Nikonov, S.V.
登録日2007-04-21
公開日2007-11-06
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.65 Å)
主引用文献New Insights into the Interactions of the Translation Initiation Factor 2 from Archaea with Guanine Nucleotides and Initiator tRNA.
J.Mol.Biol., 373, 2007
6RBB
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BU of 6rbb by Molmil
CRYSTAL STRUCTURE OF the VhH-domain of anti-IL-17A antibody netakimab
分子名称: VHH domain of netakimab
著者Kostareva, O.S, Kolyadenko, I.A, Ulitin, A.B, Ekimova, V.M, Evdokimov, S.R, Garber, M.B, Tishchenko, T.V, Gabdulkhakov, A.G.
登録日2019-04-10
公開日2020-05-13
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.45 Å)
主引用文献CRYSTAL STRUCTURE OF the VhH-domain of anti-IL-17A antibody netakimab
To Be Published
1AD2
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BU of 1ad2 by Molmil
RIBOSOMAL PROTEIN L1 MUTANT WITH SERINE 179 REPLACED BY CYSTEINE
分子名称: (4R)-2-METHYLPENTANE-2,4-DIOL, MERCURY (II) ION, RIBOSOMAL PROTEIN L1, ...
著者Unge, J, Al-Karadaghi, S, Liljas, A, Jonsson, B.-H, Eliseikina, I, Ossina, N, Nevskaya, N, Fomenkova, N, Garber, M, Nikonov, S.
登録日1997-02-20
公開日1997-05-15
最終更新日2024-02-07
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献A mutant form of the ribosomal protein L1 reveals conformational flexibility.
FEBS Lett., 411, 1997
6R8S
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BU of 6r8s by Molmil
Crystal structure of aIF2gamma subunit I181K from archaeon Sulfolobus solfataricus complexed with GDPCP
分子名称: FORMIC ACID, MAGNESIUM ION, PHOSPHOMETHYLPHOSPHONIC ACID GUANYLATE ESTER, ...
著者Kravchenko, O, Arkhipova, V, Gabdulkhakov, A, Stolboushkina, E, Nikonov, O, Garber, M, Nikonov, S.
登録日2019-04-02
公開日2020-05-06
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.18 Å)
主引用文献Crystal structure of aIF2gamma subunit I181K from archaeon Sulfolobus solfataricus complexed with GDPCP
To Be Published
6R8T
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BU of 6r8t by Molmil
Crystal structure of aIF2gamma subunit I181T from archaeon Sulfolobus solfataricus complexed with GDPCP
分子名称: FORMIC ACID, MAGNESIUM ION, PHOSPHOMETHYLPHOSPHONIC ACID GUANYLATE ESTER, ...
著者Kravchenko, O, Arkhipova, V, Gabdulkhakov, A, Stolboushkina, E, Nikonov, O, Garber, M, Nikonov, S.
登録日2019-04-02
公開日2020-05-06
最終更新日2024-01-24
実験手法X-RAY DIFFRACTION (2.1 Å)
主引用文献Crystal structure of aIF2gamma subunit I181T from archaeon Sulfolobus solfataricus complexed with GDPCP
To Be Published
3I1F
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BU of 3i1f by Molmil
Gamma-subunit of the translation initiation factor 2 from S. solfataricus in complex with Gpp(CH2)p
分子名称: PHOSPHATE ION, PHOSPHOMETHYLPHOSPHONIC ACID GUANYLATE ESTER, Translation initiation factor 2 subunit gamma
著者Stolboushkina, E.A, Nikonov, S.V, Nikulin, A.D, Blaesi, U, Garber, M.B, Nikonov, O.S.
登録日2009-06-26
公開日2010-06-30
最終更新日2023-11-01
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献5-prime-triphosphate end of mRNA recognizes the second GTP-binding site on the gamma-subunit of the archaeal translation initiation factor 2
To be Published
5DSZ
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BU of 5dsz by Molmil
Gamma-subunit of the translation initiation factor 2 from S. solfataricus
分子名称: Translation initiation factor 2 subunit gamma
著者Kravchenko, O.V, Nikonov, O.S, Stolboushkina, E.A, Nevskaya, N.A, Nikulin, A.D, Garber, M.B, Nikonov, S.V.
登録日2015-09-17
公開日2016-08-24
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (2.5 Å)
主引用文献Gamma-subunit of the translation initiation factor 2 from S. solfataricus
To Be Published
3JSY
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BU of 3jsy by Molmil
N-terminal fragment of ribosomal protein L10 from Methanococcus jannaschii
分子名称: Acidic ribosomal protein P0 homolog
著者Kravchenko, O, Mitroshin, I, Nikulin, A.D, Piendl, W, Garber, M, Nikonov, S.
登録日2009-09-11
公開日2010-05-26
最終更新日2024-03-20
実験手法X-RAY DIFFRACTION (1.6 Å)
主引用文献Structure of a two-domain N-terminal fragment of ribosomal protein L10 from Methanococcus jannaschii reveals a specific piece of the archaeal ribosomal stalk
J.Mol.Biol., 399, 2010

 

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