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PDB: 65 results
5U9I
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BU of 5u9i by Molmil
Crystal structure of the FKBP domain of human aryl hydrocarbon receptor-interacting protein-like 1 (AIPL1) complexed with S-farnesyl-L-cysteine methyl ester
Descriptor: Aryl hydrocarbon receptor-interacting protein-like 1 (AIPL1), FARNESYL
Authors:Yadav, R.P, Gakhar, L, Liping, Y, Artemyev, N.O.
Deposit date:2016-12-16
Release date:2017-07-26
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Unique structural features of the AIPL1-FKBP domain that support prenyl lipid binding and underlie protein malfunction in blindness.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
5V35
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BU of 5v35 by Molmil
Crystal structure of V71F mutant of the FKBP domain of human aryl hydrocarbon receptor-interacting protein-like 1 (AIPL1) complexed with S-farnesyl-L-cysteine methyl ester
Descriptor: Aryl hydrocarbon receptor-interacting protein-like 1 (AIPL1), FARNESYL
Authors:Yadav, R.P, Gakhar, L, Liping, Y, Artemyev, N.O.
Deposit date:2017-03-06
Release date:2017-07-26
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Unique structural features of the AIPL1-FKBP domain that support prenyl lipid binding and underlie protein malfunction in blindness.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
5U9K
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BU of 5u9k by Molmil
Crystal structure of V71F mutant of the FKBP domain of human aryl hydrocarbon receptor-interacting protein-like 1 (AIPL1)
Descriptor: Aryl hydrocarbon receptor-interacting protein-like 1 (AIPL1)
Authors:Yadav, R.P, Gakhar, L, Liping, Y, Artemyev, N.O.
Deposit date:2016-12-16
Release date:2017-07-26
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Unique structural features of the AIPL1-FKBP domain that support prenyl lipid binding and underlie protein malfunction in blindness.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
5U9A
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BU of 5u9a by Molmil
Crystal structure of the FKBP domain of human aryl hydrocarbon receptor-interacting protein-like 1 (AIPL1)
Descriptor: Aryl hydrocarbon receptor-interacting protein-like 1 (AIPL1)
Authors:Yadav, R.P, Gakhar, L, Liping, Y, Artemyev, N.O.
Deposit date:2016-12-15
Release date:2017-07-26
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Unique structural features of the AIPL1-FKBP domain that support prenyl lipid binding and underlie protein malfunction in blindness.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
5U9J
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BU of 5u9j by Molmil
Crystal structure of the FKBP domain of human aryl hydrocarbon receptor-interacting protein-like 1 (AIPL1) complexed with geranyl geranyl pyrophoshate
Descriptor: Aryl hydrocarbon receptor-interacting protein-like 1 (AIPL1), GERAN-8-YL GERAN, ISOPROPYL ALCOHOL, ...
Authors:Yadav, R.P, Gakhar, L, Liping, Y, Artemyev, N.O.
Deposit date:2016-12-16
Release date:2017-07-26
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Unique structural features of the AIPL1-FKBP domain that support prenyl lipid binding and underlie protein malfunction in blindness.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
7UHW
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BU of 7uhw by Molmil
Horse liver alcohol dehydrogenase G173A, complexed with NAD+ and 2,3,4,5,6-pentafluorobenzyl alcohol at 120 K
Descriptor: (4R)-2-METHYLPENTANE-2,4-DIOL, 2,3,4,5,6-PENTAFLUOROBENZYL ALCOHOL, Alcohol dehydrogenase E chain, ...
Authors:Plapp, B.V, Gakhar, L.
Deposit date:2022-03-27
Release date:2022-04-06
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Dependence of crystallographic atomic displacement factors on temperature (25-150 K) for complexes of horse liver alcohol dehydrogenases
Acta Crystallogr.,Sect.D, D78, 2022
7UHX
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BU of 7uhx by Molmil
Horse liver alcohol dehydrogenase G173A, complexed with NAD+ and 2,3,4,5,6-pentafluorobenzyl alcohol at 150 K
Descriptor: (4R)-2-METHYLPENTANE-2,4-DIOL, 2,3,4,5,6-PENTAFLUOROBENZYL ALCOHOL, Alcohol dehydrogenase E chain, ...
Authors:Plapp, B.V, Gakhar, L.
Deposit date:2022-03-27
Release date:2022-04-06
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Dependence of crystallographic atomic displacement factors on temperature (25-150 K) for complexes of horse liver alcohol dehydrogenases
Acta Crystallogr.,Sect.D, D78, 2022
7UHV
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BU of 7uhv by Molmil
Horse liver alcohol dehydrogenase G173A, complexed with NAD+ and 2,3,4,5,6-pentafluorobenzyl alcohol at 50 K
Descriptor: (4R)-2-METHYLPENTANE-2,4-DIOL, 2,3,4,5,6-PENTAFLUOROBENZYL ALCOHOL, Alcohol dehydrogenase E chain, ...
Authors:Plapp, B.V, Gakhar, L.
Deposit date:2022-03-27
Release date:2022-04-06
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Dependence of crystallographic atomic displacement factors on temperature (25-150 K) for complexes of horse liver alcohol dehydrogenases
Acta Crystallogr.,Sect.D, D78, 2022
4JIO
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BU of 4jio by Molmil
Bro1 V domain and ubiquitin
Descriptor: BRO1, Ubiquitin
Authors:Pashkova, N, Gakhar, L, Piper, R.C.
Deposit date:2013-03-06
Release date:2013-06-19
Last modified:2013-07-10
Method:X-RAY DIFFRACTION (3.6 Å)
Cite:The yeast alix homolog bro1 functions as a ubiquitin receptor for protein sorting into multivesicular endosomes.
Dev.Cell, 25, 2013
4JJY
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BU of 4jjy by Molmil
Alix V domain
Descriptor: Programmed cell death 6-interacting protein
Authors:Pashkova, N, Gakhar, L, Yu, L, Piper, R.C.
Deposit date:2013-03-08
Release date:2013-06-19
Last modified:2013-07-10
Method:X-RAY DIFFRACTION (6.503 Å)
Cite:The yeast alix homolog bro1 functions as a ubiquitin receptor for protein sorting into multivesicular endosomes.
Dev.Cell, 25, 2013
4QLF
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BU of 4qlf by Molmil
Crystal structure of I14G DHFR mutant complexed with folate and NADP+
Descriptor: Dihydrofolate reductase, FOLIC ACID, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Stojkovic, V, Gakhar, L, Kohen, A.
Deposit date:2014-06-12
Release date:2014-11-26
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.44 Å)
Cite:Free energy simulations of active-site mutants of dihydrofolate reductase.
J.Phys.Chem.B, 119, 2015
4QLE
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BU of 4qle by Molmil
Crystal structure of I14A DHFR mutant complexed with folate and NADP+
Descriptor: Dihydrofolate reductase, FOLIC ACID, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Stojkovic, V, Gakhar, L, Kohen, A.
Deposit date:2014-06-12
Release date:2014-11-26
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Free energy simulations of active-site mutants of dihydrofolate reductase.
J.Phys.Chem.B, 119, 2015
4QLG
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BU of 4qlg by Molmil
Crystal structure of I14V DHFR mutant complexed with folate and NADP+
Descriptor: Dihydrofolate reductase, FOLIC ACID, NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE
Authors:Stojkovic, V, Gakhar, L, Kohen, A.
Deposit date:2014-06-12
Release date:2014-11-26
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Free energy simulations of active-site mutants of dihydrofolate reductase.
J.Phys.Chem.B, 119, 2015
4K2P
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BU of 4k2p by Molmil
The Structure of a Quintuple Mutant of the Tiam1 PH-CC-Ex Domain
Descriptor: CALCIUM ION, T-lymphoma invasion and metastasis-inducing protein 1
Authors:Joshi, M, Gakhar, L, Fuentes, E.J.
Deposit date:2013-04-09
Release date:2013-07-10
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.98 Å)
Cite:High-resolution structure of the Tiam1 PHn-CC-Ex domain.
Acta Crystallogr.,Sect.F, 69, 2013
4ID3
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BU of 4id3 by Molmil
Crystal Structure of the BRCT domain of S. Cerevisiae Rev1
Descriptor: DNA repair protein REV1
Authors:Pryor, J.M, Gakhar, L, Washington, M.T.
Deposit date:2012-12-11
Release date:2013-01-02
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.9669 Å)
Cite:Structure and Functional Analysis of the BRCT Domain of Translesion Synthesis DNA Polymerase Rev1.
Biochemistry, 52, 2013
6N85
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BU of 6n85 by Molmil
Resistance to inhibitors of cholinesterase 8A (Ric8A) protein in complex with MBP-tagged transducin-alpha residues 327-350
Descriptor: Maltose/maltodextrin-binding periplasmic protein,Guanine nucleotide-binding protein G(t) subunit alpha-2, Synembryn-A, alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose
Authors:Srivastava, D, Gakhar, L, Artemyev, N.O.
Deposit date:2018-11-28
Release date:2019-07-10
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural underpinnings of Ric8A function as a G-protein alpha-subunit chaperone and guanine-nucleotide exchange factor.
Nat Commun, 10, 2019
4K2O
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BU of 4k2o by Molmil
The Structure of a Triple Mutant of the Tiam1 PH-CC-Ex Domain
Descriptor: T-lymphoma invasion and metastasis-inducing protein 1
Authors:Joshi, M, Gakhar, L, Fuentes, E.J.
Deposit date:2013-04-09
Release date:2013-07-10
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.15 Å)
Cite:High-resolution structure of the Tiam1 PHn-CC-Ex domain.
Acta Crystallogr.,Sect.F, 69, 2013
6N84
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BU of 6n84 by Molmil
MBP-fusion protein of transducin-alpha residues 327-350
Descriptor: Maltose/maltodextrin-binding periplasmic protein,Guanine nucleotide-binding protein G(t) subunit alpha-2, SULFATE ION, alpha-D-glucopyranose-(1-4)-alpha-D-glucopyranose
Authors:Srivastava, D, Gakhar, L, Artemyev, N.O.
Deposit date:2018-11-28
Release date:2019-07-10
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Structural underpinnings of Ric8A function as a G-protein alpha-subunit chaperone and guanine-nucleotide exchange factor.
Nat Commun, 10, 2019
6N86
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BU of 6n86 by Molmil
Resistance to inhibitors of cholinesterase 8A (Ric8A) protein
Descriptor: Synembryn-A
Authors:Srivastava, D, Gakhar, L, Artemyev, N.O.
Deposit date:2018-11-28
Release date:2019-07-10
Last modified:2024-03-13
Method:X-RAY DIFFRACTION (3.9 Å)
Cite:Structural underpinnings of Ric8A function as a G-protein alpha-subunit chaperone and guanine-nucleotide exchange factor.
Nat Commun, 10, 2019
4JQW
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BU of 4jqw by Molmil
Crystal Structure of a Complex of NOD1 CARD and Ubiquitin
Descriptor: Nucleotide-binding oligomerization domain-containing protein 1, PHOSPHATE ION, Polyubiquitin-C
Authors:Ver Heul, A.M, Gakhar, L, Piper, R.C, Ramaswamy, S.
Deposit date:2013-03-20
Release date:2014-03-26
Last modified:2024-10-16
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Crystal structure of a complex of NOD1 CARD and ubiquitin
Plos One, 9, 2014
5V6Z
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BU of 5v6z by Molmil
Crystal structure of human caspase-7 soaked with allosteric inhibitor 2-{[2-(4-chlorophenyl)-2-oxoethyl]sulfanyl}benzoic acid
Descriptor: 2-{[2-(4-chlorophenyl)-2-oxoethyl]sulfanyl}benzoic acid, Caspase-7
Authors:Vance, N.R, Gakhar, L, Spies, M.A.
Deposit date:2017-03-17
Release date:2018-03-21
Last modified:2023-10-04
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Crystal structure of human caspase-7 soaked with allosteric inhibitor
To Be Published
5V6U
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BU of 5v6u by Molmil
Crystal structure of human caspase-7 soaked with allosteric inhibitor 2-[(2-acetylphenyl)sulfanyl]benzoic acid
Descriptor: 2-[(2-acetylphenyl)sulfanyl]benzoic acid, Caspase-7
Authors:Vance, N.R, Gakhar, L, Spies, M.A.
Deposit date:2017-03-17
Release date:2017-10-18
Last modified:2024-10-23
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Allosteric Tuning of Caspase-7: A Fragment-Based Drug Discovery Approach.
Angew. Chem. Int. Ed. Engl., 56, 2017
7UA6
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BU of 7ua6 by Molmil
Horse liver alcohol dehydrogenase with NAD and trifluoroethanol at 25K
Descriptor: (4R)-2-METHYLPENTANE-2,4-DIOL, Alcohol dehydrogenase E chain, NICOTINAMIDE-ADENINE-DINUCLEOTIDE (ACIDIC FORM), ...
Authors:Plapp, B.V, Gakhar, L.
Deposit date:2022-03-11
Release date:2022-03-23
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:Dependence of crystallographic atomic displacement factors on temperature (25-150 K) for complexes of horse liver alcohol dehydrogenases
Acta Crystallogr.,Sect.D, D78, 2022
7UEI
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BU of 7uei by Molmil
Horse liver alcohol dehydrogenase with NAD and pentafluorobenzyl alcohol at 100 K, 1.2 A, crystal 16
Descriptor: (4R)-2-METHYLPENTANE-2,4-DIOL, 2,3,4,5,6-PENTAFLUOROBENZYL ALCOHOL, Alcohol dehydrogenase E chain, ...
Authors:Plapp, B.V, Gakhar, L.
Deposit date:2022-03-21
Release date:2022-03-30
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.2 Å)
Cite:Dependence of crystallographic atomic displacement factors on temperature (25-150 K) for complexes of horse liver alcohol dehydrogenases
Acta Crystallogr.,Sect.D, D78, 2022
7UC9
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BU of 7uc9 by Molmil
Horse liver alcohol dehydrogenase with NAD and trifluoroethanol at 45 K
Descriptor: (4R)-2-METHYLPENTANE-2,4-DIOL, Alcohol dehydrogenase E chain, NICOTINAMIDE-ADENINE-DINUCLEOTIDE (ACIDIC FORM), ...
Authors:Plapp, B.V, Gakhar, L.
Deposit date:2022-03-16
Release date:2022-03-30
Last modified:2023-10-18
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:Dependence of crystallographic atomic displacement factors on temperature (25-150 K) for complexes of horse liver alcohol dehydrogenases
Acta Crystallogr.,Sect.D, D78, 2022

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PDB entries from 2024-10-30

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