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PDB: 80 results

8AIP
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Crystal Structure of Two-domain bacterial laccase from the actinobacterium Streptomyces carpinensis VKM Ac-1300
Descriptor: COPPER (II) ION, OXYGEN MOLECULE, Two-Domain Laccase
Authors:Gabdulkhakov, A.G, Tishchenko, T.V, Trubitsina, L, Trubitsin, I, Leontievsky, A, Lisov, A.
Deposit date:2022-07-27
Release date:2023-08-16
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.35 Å)
Cite:A Novel Two-Domain Laccase with Middle Redox Potential: Physicochemical and Structural Properties.
Biochemistry Mosc., 88, 2023
3THK
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BU of 3thk by Molmil
Structure of SH3 chimera with a type II ligand linked to the chain C-terminal
Descriptor: BETA-MERCAPTOETHANOL, Proline-rich peptide, SULFATE ION, ...
Authors:Gabdulkhakov, A.G, Gushchina, L.V, Nikulin, A.D, Nikonov, S.V, Filimonov, V.V.
Deposit date:2011-08-19
Release date:2011-11-23
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:High-Resolution Crystal Structure of Spectrin SH3 Domain Fused with a Proline-Rich Peptide.
J.Biomol.Struct.Dyn., 29, 2011
6FC7
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BU of 6fc7 by Molmil
Crystal Structure of Two-Domain Laccase mutant H165F from Streptomyces griseoflavus with high copper ions occupancy
Descriptor: COPPER (II) ION, GLYCEROL, OXYGEN MOLECULE, ...
Authors:Gabdulkhakov, A.G, Tishchenko, T.V.
Deposit date:2017-12-20
Release date:2019-01-30
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Investigations of Accessibility of T2/T3 Copper Center of Two-Domain Laccase fromStreptomyces griseoflavusAc-993.
Int J Mol Sci, 20, 2019
7Z8D
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BU of 7z8d by Molmil
Structure of Photosynthetic Reaction Center From Rhodobacter Sphaeroides strain RV by fixed-target serial synchrotron crystallography (room temperature, 26keV)
Descriptor: (2R)-2,3-dihydroxypropyl (9Z)-octadec-9-enoate, (2R)-2-hydroxy-3-(phosphonooxy)propyl (9E)-octadec-9-enoate, 1,2-ETHANEDIOL, ...
Authors:Gabdulkhakov, A.G, Selikhanov, G.K, Guenther, S, Petrova, T, Meents, A, Fufina, T.Y, Vasilieva, L.G.
Deposit date:2022-03-17
Release date:2023-03-29
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.14 Å)
Cite:Structure of Photosynthetic Reaction Center From Rhodobacter Sphaeroides strain RV by fixed-target serial synchrotron crystallography (room temperature, 26keV)
To Be Published
3TG8
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BU of 3tg8 by Molmil
Mutant ribosomal protein L1 lacking ala158 from thermus thermophilus
Descriptor: 50S ribosomal protein L1, CHLORIDE ION, TETRAETHYLENE GLYCOL
Authors:Gabdulkhakov, A.G, Nevskaya, N.A, Nikonov, S.V.
Deposit date:2011-08-17
Release date:2011-12-07
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structural analysis of interdomain mobility in ribosomal L1 proteins.
Acta Crystallogr.,Sect.D, 67, 2011
3QOY
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BU of 3qoy by Molmil
Crystal structure of ribosomal protein L1 from Aquifex aeolicus
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 50S ribosomal protein L1, ACETIC ACID, ...
Authors:Gabdulkhakov, A.G, Tishchenko, S.V, Nikonova, E.U, Shkliaeva, A.A, Garber, M.B, Nikonov, S.V, Nevskaya, N.A.
Deposit date:2011-02-11
Release date:2011-12-28
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal Structure of Ribosomal Protein L1 from the Bacterium Aquifex Aeolicus
Crystallography Reports, 56, 2011
8AF1
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BU of 8af1 by Molmil
Beta-Lytic Protease from Lysobacter capsici
Descriptor: CHLORIDE ION, FORMIC ACID, GLYCEROL, ...
Authors:Gabdulkhakov, A.G, Tishchenko, T.V, Kudryakova, I.V, Afoshin, A.S, Vasilyeva, N.V.
Deposit date:2022-07-15
Release date:2023-08-16
Last modified:2024-11-06
Method:X-RAY DIFFRACTION (1.57 Å)
Cite:Structural and Functional Characterization of beta-lytic Protease from Lysobacter capsici VKM B-2533 T.
Int J Mol Sci, 23, 2022
6FDJ
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BU of 6fdj by Molmil
Crystal Structure of Two-Domain Laccase mutant H165A from Streptomyces griseoflavus with high copper ions occupancy
Descriptor: COPPER (II) ION, GLYCEROL, OXYGEN MOLECULE, ...
Authors:Gabdulkhakov, A.G, Tishchenko, T.V.
Deposit date:2017-12-25
Release date:2019-01-30
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.308 Å)
Cite:Investigations of Accessibility of T2/T3 Copper Center of Two-Domain Laccase fromStreptomyces griseoflavusAc-993.
Int J Mol Sci, 20, 2019
3V3Z
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BU of 3v3z by Molmil
I(L177)H mutant structure of photosynthetic reaction center from Rhodobacter sphaeroides
Descriptor: 1,4-DIETHYLENE DIOXIDE, BACTERIOCHLOROPHYLL A, BACTERIOPHEOPHYTIN A, ...
Authors:Gabdulkhakov, A.G, Fufina, T.Y, Vasilieva, L.G, Shuvalov, V.A.
Deposit date:2011-12-14
Release date:2012-03-14
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:The site-directed mutation I(L177)H in Rhodobacter sphaeroides reaction center affects coordination of P(A) and B(B) bacteriochlorophylls.
Biochim.Biophys.Acta, 1817, 2012
3UMY
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BU of 3umy by Molmil
Crystal structure of mutant ribosomal protein T217A TthL1 in complex with 80nt 23S RNA from Thermus thermophilus
Descriptor: 50S ribosomal protein L1, CHLORIDE ION, MAGNESIUM ION, ...
Authors:Gabdulkhakov, A.G, Nevskaya, N.A, Nikonov, S.V.
Deposit date:2011-11-15
Release date:2012-10-31
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Crystal structure of mutant ribosomal protein T217A TthL1 in complex with 80nt 23S RNA from Thermus thermophilus
To be Published
3V3Y
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BU of 3v3y by Molmil
Photosynthetic Reaction Center From Rhodobacter Sphaeroides strain RV
Descriptor: 1,4-DIETHYLENE DIOXIDE, BACTERIOCHLOROPHYLL A, BACTERIOPHEOPHYTIN A, ...
Authors:Gabdulkhakov, A.G, Fufina, T.Y, Vasilieva, L.G, Shuvalov, V.A.
Deposit date:2011-12-14
Release date:2012-03-14
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:The site-directed mutation I(L177)H in Rhodobacter sphaeroides reaction center affects coordination of P(A) and B(B) bacteriochlorophylls.
Biochim.Biophys.Acta, 1817, 2012
3U56
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BU of 3u56 by Molmil
Crystal structure of mutant ribosomal protein T217V TthL1 in complex with 80nt 23S RNA from Thermus thermophilus
Descriptor: 50S ribosomal protein L1, MAGNESIUM ION, MALONATE ION, ...
Authors:Gabdulkhakov, A.G, Nevskaya, N.A, NIkonov, S.V.
Deposit date:2011-10-11
Release date:2012-10-31
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Crystal structure of ribosomal protein tthl1 in complex with 80nt 23s rna from thermus thermophilus
To be Published
5COL
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BU of 5col by Molmil
RIBOSOMAL PROTEIN L11 FROM METHANOCOCCUS JANNASCHII
Descriptor: 50S ribosomal protein L11, CHLORIDE ION, CITRIC ACID, ...
Authors:Gabdulkhakov, A.G, Mitroshin, I.V, Garber, M.B.
Deposit date:2015-07-20
Release date:2016-08-17
Last modified:2024-05-08
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:CRYSTAL STRUCTURE OF RIBOSOMAL PROTEIN L11 FROM METHANOCOCCUS JANNASCHII
To Be Published
5D6G
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BU of 5d6g by Molmil
CRYSTAL STRUCTURE OF FRAGMENT OF RIBOSOMAL PROTEIN P0 IN COMPLEX WITH 74NT 23S RNA FROM METHANOCOCCUS JANNASCHII
Descriptor: 23S ribosomal RNA, 50S ribosomal protein L10, MAGNESIUM ION
Authors:Gabdulkhakov, A.G, Mitroshin, I.V, Garber, M.B.
Deposit date:2015-08-12
Release date:2016-09-14
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:CRYSTAL STRUCTURE OF FRAGMENT OF RIBOSOMAL PROTEIN P0 IN COMPLEX WITH 74NT 23S RNA FROM METHANOCOCCUS JANNASCHII
To Be Published
5DAR
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BU of 5dar by Molmil
CRYSTAL STRUCTURE OF THE BASE OF THE RIBOSOMAL P STALK FROM METHANOCOCCUS JANNASCHII
Descriptor: 50S ribosomal protein L10, 50S ribosomal protein L11, 74 nt fragment of 23S rRNA, ...
Authors:Gabdulkhakov, A.G, Mitroshin, I.V, Garber, M.B.
Deposit date:2015-08-20
Release date:2016-09-14
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:CRYSTAL STRUCTURE OF THE BASE OF THE RIBOSOMAL P STALK FROM METHANOCOCCUS JANNASCHII
To Be Published
5D8H
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BU of 5d8h by Molmil
CRYSTAL STRUCTURE OF THE BASE OF THE RIBOSOMAL P STALK FROM METHANOCOCCUS JANNASCHII WITH ANTIBIOTIC THIOSTREPTON
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, 23S ribosomal RNA, 50S ribosomal protein L10, ...
Authors:Gabdulkhakov, A.G, Mitroshin, I.V, Garber, M.B.
Deposit date:2015-08-17
Release date:2016-08-24
Last modified:2019-04-24
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:CRYSTAL STRUCTURE OF THE BASE OF THE RIBOSOMAL P STALK FROM METHANOCOCCUS JANNASCHII WITH ANTIBIOTIC THIOSTREPTON
To Be Published
5ML7
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BU of 5ml7 by Molmil
CRYSTAL STRUCTURE OF L1-STALK FRAGMENT OF 23S rRNA FROM HALOARCULA MARISMORTUI
Descriptor: 23S ribosomal RNA, CALCIUM ION, MAGNESIUM ION
Authors:Gabdulkhakov, A.G, Tishchenko, T.V, Nevskaya, N.A, Nikonov, S.V.
Deposit date:2016-12-06
Release date:2017-12-20
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (3.3 Å)
Cite:Crystal Structure of the 23S rRNA Fragment Specific to r-Protein L1 and Designed Model of the Ribosomal L1 Stalk from Haloarcula marismortui
Crystals, 2017
5O4I
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BU of 5o4i by Molmil
Crystal Structure of mutant M54L/M64L/M96L of Two-Domain Laccase from Streptomyces griseoflavus dialyzed against solution containing 0.25 mM copper sulfate
Descriptor: COPPER (II) ION, GLYCEROL, SULFATE ION, ...
Authors:Gabdulkhakov, A.G, Tishchenko, T.V.
Deposit date:2017-05-29
Release date:2018-03-28
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Incorporation of Copper Ions into T2/T3 Centers of Two-Domain Laccases.
Mol.Biol.(Moscow), 52, 2018
5O3K
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BU of 5o3k by Molmil
Crystal Structure of mutant M54L/M64L/M96L of Two-Domain Laccase from Streptomyces griseoflavus with 1 mM copper sulfate on growth medium
Descriptor: COPPER (II) ION, GLYCEROL, OXYGEN ATOM, ...
Authors:Gabdulkhakov, A.G, Tishchenko, T.V.
Deposit date:2017-05-24
Release date:2018-03-28
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Incorporation of Copper Ions into T2/T3 Centers of Two-Domain Laccases.
Mol.Biol.(Moscow), 52, 2018
5O4Q
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BU of 5o4q by Molmil
Crystal Structure of mutant M54L/M64L/M96L of Two-Domain Laccase from Streptomyces griseoflavus with 0.25 mM copper sulfate on growth medium
Descriptor: 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, AZIDE ION, COPPER (II) ION, ...
Authors:Gabdulkhakov, A.G, Tishchenko, T.V.
Deposit date:2017-05-30
Release date:2018-03-28
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Incorporation of Copper Ions into T2/T3 Centers of Two-Domain Laccases.
Mol.Biol.(Moscow), 52, 2018
5NPM
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BU of 5npm by Molmil
CRYSTAL STRUCTURE OF MUTANT RIBOSOMAL PROTEIN TTHL1 LACKING 8 N-TERMINAL RESIDUES IN COMPLEX WITH 80NT 23S RNA FROM THERMUS THERMOPHILUS
Descriptor: 23S ribosomal RNA, 50S ribosomal protein L1, MALONATE ION, ...
Authors:Gabdulkhakov, A.G, Tishchenko, T.V, Nevskaya, N.A, Nikonov, S.V, Garber, M.B.
Deposit date:2017-04-17
Release date:2018-05-16
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:[Influence of Nonconserved Regions of L1 Protuberance of Thermus thermophilus Ribosome on the Affinity of L1 Protein to 23s rRNA].
Mol.Biol.(Moscow), 52, 2018
4LWY
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BU of 4lwy by Molmil
L(M196)H,H(M202)L Double Mutant Structure of Photosynthetic Reaction Center From Rhodobacter Sphaeroides strain RV
Descriptor: 1,2-ETHANEDIOL, 1,4-DIETHYLENE DIOXIDE, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, ...
Authors:Gabdulkhakov, A.G.
Deposit date:2013-07-29
Release date:2014-07-16
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.903 Å)
Cite:Molecular Dynamic Studies of Reaction Centers Mutants from Rhodobacter sphaeroides and his mutant form L(M196)H+H(M202)L
CRYSTALLOGR REP., 59, 2014
3U4M
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BU of 3u4m by Molmil
Crystal structure of ribosomal protein tthl1 in complex with 80nt 23s rna from thermus thermophilus
Descriptor: 50S ribosomal protein L1, CHLORIDE ION, MAGNESIUM ION, ...
Authors:Gabdulkhakov, A.G, Nevskaya, N.A, NIkonov, S.V.
Deposit date:2011-10-10
Release date:2012-08-08
Last modified:2023-09-13
Method:X-RAY DIFFRACTION (2 Å)
Cite:High-resolution crystal structure of the isolated ribosomal L1 stalk.
Acta Crystallogr.,Sect.D, 68, 2012
4LQ4
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BU of 4lq4 by Molmil
crystal structure of mutant ribosomal protein L1 from Methanococcus jannaschii with deletion of 8 residues from C-terminus
Descriptor: 50S ribosomal protein L1, CHLORIDE ION, ISOPROPYL ALCOHOL, ...
Authors:Gabdulkhakov, A.G, Tishchenko, S.V, Shkliaeva, A.A, Garber, M.B, Nikonov, S.V, Sarskikh, A.V.
Deposit date:2013-07-17
Release date:2014-07-02
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Crystal structure of a mutant of archaeal ribosomal protein L1 from Methanococcus jannaschii
Crystallography Reports, 59, 2014
5LHL
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BU of 5lhl by Molmil
Crystal Structure of Two-Domain Laccase from Streptomyces griseoflavus
Descriptor: CHLORIDE ION, COPPER (II) ION, OXYGEN MOLECULE, ...
Authors:Gabdulkhakov, A.G.
Deposit date:2016-07-12
Release date:2017-08-16
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal Structure of Two-Domain Laccase from Streptomyces griseoflavus
To Be Published

 

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