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PDB: 737 results

7OUG
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BU of 7oug by Molmil
STLV-1 intasome:B56 in complex with the strand-transfer inhibitor raltegravir
Descriptor: DNA (5'-D(*AP*CP*TP*GP*TP*GP*TP*TP*TP*GP*GP*CP*GP*CP*TP*TP*CP*TP*CP*TP*C)-3'), DNA (5'-D(*GP*AP*GP*AP*GP*AP*AP*GP*CP*GP*CP*CP*AP*AP*AP*CP*AP*CP*A)-3'), Integrase, ...
Authors:Barski, M.S, Ballandras-Colas, A, Cronin, N.B, Pye, V.E, Cherepanov, P, Maertens, G.N.
Deposit date:2021-06-11
Release date:2021-08-18
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Structural basis for the inhibition of HTLV-1 integration inferred from cryo-EM deltaretroviral intasome structures.
Nat Commun, 12, 2021
7OUH
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BU of 7ouh by Molmil
Structure of the STLV intasome:B56 complex bound to the strand-transfer inhibitor bictegravir
Descriptor: Bictegravir, DNA (5'-D(*AP*CP*TP*GP*TP*GP*TP*TP*TP*GP*GP*CP*GP*CP*TP*TP*CP*TP*CP*TP*C)-3'), DNA (5'-D(*GP*AP*GP*AP*GP*AP*AP*GP*CP*GP*CP*CP*AP*AP*AP*CP*AP*CP*A)-3'), ...
Authors:Barski, M.S, Ballandras-Colas, A, Cronin, N.B, Pye, V.E, Cherepanov, P, Maertens, G.N.
Deposit date:2021-06-11
Release date:2021-08-18
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (3.5 Å)
Cite:Structural basis for the inhibition of HTLV-1 integration inferred from cryo-EM deltaretroviral intasome structures.
Nat Commun, 12, 2021
7OUF
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BU of 7ouf by Molmil
Structure of the STLV intasome:B56 complex bound to the strand-transfer inhibitor XZ450
Descriptor: 4-azanyl-~{N}-[[2,4-bis(fluoranyl)phenyl]methyl]-6-[3-(dimethylamino)-3-oxidanylidene-propyl]-1-oxidanyl-2-oxidanylidene-1,8-naphthyridine-3-carboxamide, DNA (5'-D(*AP*CP*TP*GP*TP*GP*TP*TP*TP*GP*GP*CP*GP*CP*TP*TP*CP*TP*CP*TP*C)-3'), DNA (5'-D(*GP*AP*GP*AP*GP*AP*AP*GP*CP*GP*CP*CP*AP*AP*AP*CP*AP*CP*A)-3'), ...
Authors:Barski, M.S, Ballandras-Colas, A, Cronin, N.B, Pye, V.E, Cherepanov, P, Maertens, G.N.
Deposit date:2021-06-11
Release date:2021-08-18
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Structural basis for the inhibition of HTLV-1 integration inferred from cryo-EM deltaretroviral intasome structures.
Nat Commun, 12, 2021
7OWG
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BU of 7owg by Molmil
human DEPTOR in a complex with mutant human mTORC1 A1459P
Descriptor: DEP domain-containing mTOR-interacting protein, Regulatory-associated protein of mTOR, Serine/threonine-protein kinase mTOR, ...
Authors:Heimhalt, M, Berndt, A, Wagstaff, J, Anandapadamanaban, M, Perisic, O, Maslen, S, McLaughlin, S, Yu, W.-H, Masson, G.R, Boland, A, Ni, X, Yamashita, K, Murshudov, G.N, Skehel, M, Freund, S.M, Williams, R.L.
Deposit date:2021-06-18
Release date:2021-09-08
Last modified:2024-07-17
Method:ELECTRON MICROSCOPY (4.7 Å)
Cite:Bipartite binding and partial inhibition links DEPTOR and mTOR in a mutually antagonistic embrace.
Elife, 10, 2021
6IJ9
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BU of 6ij9 by Molmil
Crystal Structure of Arabidopsis thaliana UGT89C1 complexed with UDP
Descriptor: UDP-glycosyltransferase 89C1, URIDINE-5'-DIPHOSPHATE
Authors:Zong, G.N, Wang, X.Q.
Deposit date:2018-10-09
Release date:2019-10-16
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (3 Å)
Cite:Crystal Structure of Arabidopsis thaliana UGT89C1 complexed with UDP
To Be Published
6JJH
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BU of 6jjh by Molmil
Crystal structure of a two-quartet RNA parallel G-quadruplex complexed with the porphyrin TMPyP4
Descriptor: (1Z,4Z,9Z,15Z)-5,10,15,20-tetrakis(1-methylpyridin-1-ium-4-yl)-21,23-dihydroporphyrin, POTASSIUM ION, RNA (5'-R(*GP*GP*CP*UP*CP*GP*GP*CP*GP*GP*CP*GP*GP*A)-3')
Authors:Zhang, Y.S, EI Omari, K, Duman, R, Wagner, A, Parkinson, G.N, Wei, D.G.
Deposit date:2019-02-25
Release date:2020-02-26
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.74 Å)
Cite:Native de novo structural determinations of non-canonical nucleic acid motifs by X-ray crystallography at long wavelengths.
Nucleic Acids Res., 48, 2020
6JJF
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BU of 6jjf by Molmil
Crystal structure of a two-quartet DNA mixed-parallel/antiparallel G-quadruplex
Descriptor: COBALT HEXAMMINE(III), DNA (5'-D(*GP*GP*CP*TP*CP*GP*GP*CP*GP*GP*CP*GP*GP*A)-3'), POTASSIUM ION, ...
Authors:Zhang, Y.S, EI Omari, K, Duman, R, Wagner, A, Parkinson, G.N, Wei, D.G.
Deposit date:2019-02-25
Release date:2020-02-26
Last modified:2024-03-27
Method:X-RAY DIFFRACTION (1.47 Å)
Cite:Native de novo structural determinations of non-canonical nucleic acid motifs by X-ray crystallography at long wavelengths.
Nucleic Acids Res., 48, 2020
6HPS
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BU of 6hps by Molmil
Near-infrared dual bioluminescence imaging in vivo using infra-luciferin
Descriptor: Luciferin 4-monooxygenase, [(2~{R},3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methyl ~{N}-[[2-[(~{E})-2-(6-oxidanyl-1,3-benzothiazol-2-yl)ethenyl]-1,3-thiazol-4-yl]carbonyl]sulfamate
Authors:Parkinson, G.N, Stowe, C, Anderson, J.C.
Deposit date:2018-09-21
Release date:2019-10-23
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Near-infrared dual bioluminescence imaging in mouse models of cancer using infraluciferin.
Elife, 8, 2019
6KFL
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BU of 6kfl by Molmil
Crystal structure of a two-quartet DNA G-quadruplex complexed with the porphyrin TMPyP4
Descriptor: (1Z,4Z,9Z,15Z)-5,10,15,20-tetrakis(1-methylpyridin-1-ium-4-yl)-21,23-dihydroporphyrin, COBALT HEXAMMINE(III), DNA (5'-D(*GP*GP*CP*TP*CP*GP*GP*CP*GP*GP*CP*GP*GP*A)-3'), ...
Authors:Zhang, Y.S, Parkinson, G.N, Wei, D.G.
Deposit date:2019-07-08
Release date:2020-07-08
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (1.92 Å)
Cite:Crystal structure of a two-quartet DNA G-quadruplex complexed with the porphyrin TMPyP4
To Be Published
6JJI
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BU of 6jji by Molmil
Crystal structure of a two-quartet RNA parallel G-quadruplex complexed with the porphyrin TMPyP4 (1:1)
Descriptor: (1Z,4Z,9Z,15Z)-5,10,15,20-tetrakis(1-methylpyridin-1-ium-4-yl)-21,23-dihydroporphyrin, POTASSIUM ION, RNA (5'-R(*GP*GP*CP*UP*CP*GP*GP*CP*GP*GP*CP*GP*GP*A)-3')
Authors:Zhang, Y.S, Parkinson, G.N, Wei, D.G.
Deposit date:2019-02-25
Release date:2020-02-26
Last modified:2023-11-22
Method:X-RAY DIFFRACTION (3.1 Å)
Cite:Native de novo structural determinations of non-canonical nucleic acid motifs by X-ray crystallography at long wavelengths.
Nucleic Acids Res., 48, 2020
4C0P
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BU of 4c0p by Molmil
Unliganded Transportin 3
Descriptor: 2,3-DIHYDROXY-1,4-DITHIOBUTANE, TRANSPORTIN-3
Authors:Maertens, G.N, Cook, N.J, Hare, S, Cherepanov, P.
Deposit date:2013-08-06
Release date:2014-01-22
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.95 Å)
Cite:Structural Basis for Nuclear Import of Splicing Factors by Human Transportin 3.
Proc.Natl.Acad.Sci.USA, 111, 2014
4C0O
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BU of 4c0o by Molmil
Transportin 3 in complex with phosphorylated ASF/SF2
Descriptor: POTASSIUM ION, SERINE/ARGININE-RICH SPLICING FACTOR 1, TRANSPORTIN-3
Authors:Maertens, G.N, Cook, N.J, Cherepanov, P.
Deposit date:2013-08-06
Release date:2014-01-22
Last modified:2023-12-20
Method:X-RAY DIFFRACTION (2.557 Å)
Cite:Structural Basis for Nuclear Import of Splicing Factors by Human Transportin 3.
Proc.Natl.Acad.Sci.USA, 111, 2014
4DPN
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BU of 4dpn by Molmil
Crystal Structure of ConM Complexed with Resveratrol
Descriptor: CALCIUM ION, Concanavalin-A, MANGANESE (II) ION, ...
Authors:Freire, V.N, Gottfried, C, Rocha, B.A.M, Cavada, B.S, Delatorre, P, Santi-Gadelha, T, Gadelha, C.A.A, Batista, G.N, N brega, R.B, Silva-Filho, J.C.
Deposit date:2012-02-13
Release date:2013-03-06
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Crystal Structure of ConM Complexed with Resveratrol
To be Published
6QI5
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BU of 6qi5 by Molmil
Near Atomic Structure of an Atadenovirus Shows a possible gene duplication event and Intergenera Variations in Cementing Proteins
Descriptor: Hexon protein, PIIIa, Penton protein, ...
Authors:Condezo, G.N, Marabini, R, Gomez-Blanco, J, SanMartin, C.
Deposit date:2019-01-17
Release date:2020-08-05
Last modified:2024-05-15
Method:ELECTRON MICROSCOPY (3.4 Å)
Cite:Near-atomic structure of an atadenovirus reveals a conserved capsid-binding motif and intergenera variations in cementing proteins.
Sci Adv, 7, 2021
4RD7
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BU of 4rd7 by Molmil
The crystal structure of a Cupin 2 conserved barrel domain protein from Salinispora arenicola CNS-205
Descriptor: Cupin 2 conserved barrel domain protein, GLYCEROL, SULFATE ION
Authors:Tan, K, Gu, M, Clancy, S, Phillips Jr, G.N, Joachimiak, A, Midwest Center for Structural Genomics (MCSG), Enzyme Discovery for Natural Product Biosynthesis (NatPro)
Deposit date:2014-09-18
Release date:2014-10-01
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (1.571 Å)
Cite:The crystal structure of a Cupin 2 conserved barrel domain protein from Salinispora arenicola CNS-205
To be Published
6UVQ
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BU of 6uvq by Molmil
Crystal structure of Apo AtmM
Descriptor: ACETATE ION, D-glucose O-methyltransferase, MAGNESIUM ION
Authors:Alvarado, S.K, Wang, Z, Miller, M.D, Thorson, J.S, Phillips Jr, G.N.
Deposit date:2019-11-04
Release date:2020-11-25
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.84 Å)
Cite:Structure of Apo AtmM
To Be Published
6UWD
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BU of 6uwd by Molmil
Crystal structure of Apo AtmM
Descriptor: ACETATE ION, D-glucose O-methyltransferase, MAGNESIUM ION
Authors:Alvarado, S.K, Wang, Z, Miller, M.D, Thorson, J.S, Phillips Jr, G.N.
Deposit date:2019-11-05
Release date:2020-11-25
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.04 Å)
Cite:Structure of Apo AtmM
To Be Published
4RNL
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BU of 4rnl by Molmil
The crystal structure of a possible galactose mutarotase from Streptomyces platensis subsp. rosaceus
Descriptor: GLYCEROL, PHOSPHATE ION, possible galactose mutarotase
Authors:Tan, K, Li, H, Endres, M, Phillips Jr, G.N, Joachimiak, A, Midwest Center for Structural Genomics (MCSG), Enzyme Discovery for Natural Product Biosynthesis (NatPro)
Deposit date:2014-10-24
Release date:2014-11-26
Last modified:2024-10-30
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:The crystal structure of a possible galactose mutarotase from Streptomyces platensis subsp. rosaceus
To be Published
6UPP
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BU of 6upp by Molmil
Radiation Damage Test of PixJ Pb state crystals
Descriptor: 1,2-ETHANEDIOL, MAGNESIUM ION, Methyl-accepting chemotaxis protein, ...
Authors:Clinger, J.A, Miller, M.D, Burgie, E.S, Vierstra, R.D, Phillips Jr, G.N.
Deposit date:2019-10-18
Release date:2019-12-18
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.56 Å)
Cite:Photoreversible interconversion of a phytochrome photosensory module in the crystalline state.
Proc.Natl.Acad.Sci.USA, 117, 2020
6UV6
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BU of 6uv6 by Molmil
AtmM with bound rebeccamycin analogue
Descriptor: 12-beta-D-glucopyranosyl-12,13-dihydro-5H-indolo[2,3-a]pyrrolo[3,4-c]carbazole-5,7(6H)-dione, D-glucose O-methyltransferase, S-ADENOSYL-L-HOMOCYSTEINE
Authors:Alvarado, S.K, Wang, Z, Miller, M.D, Thorson, J.S, Phillips Jr, G.N.
Deposit date:2019-11-01
Release date:2020-11-25
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2.72 Å)
Cite:Structure of AtmM Bound with Glycosylated Indolocarbazole
To Be Published
6V04
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BU of 6v04 by Molmil
DynU16 crystal structure, a putative protein in the dynemicin biosynthetic locus
Descriptor: CHLORIDE ION, MAGNESIUM ION, SODIUM ION, ...
Authors:Alvarado, S.K, Miller, M.D, Bhardwaj, M, Thorson, J.S, Van Lanen, S.G, Phillips Jr, G.N.
Deposit date:2019-11-18
Release date:2020-11-18
Last modified:2024-05-22
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Structural characterization of DynU16, a START/Bet v1-like protein involved in dynemicin biosynthesis.
Acta Crystallogr.,Sect.F, 77, 2021
4TS6
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BU of 4ts6 by Molmil
Crystal structure of the RIM C2A domain from Drosophila.
Descriptor: GLYCEROL, Rab3 interacting molecule variant 2
Authors:Hatzopoulos, G.N, Shiroma, J, Vakonakis, I.
Deposit date:2014-06-18
Release date:2015-07-01
Last modified:2024-08-07
Method:X-RAY DIFFRACTION (1.92 Å)
Cite:The human cognition-enhancing CORD7 mutation increases active zone number and synaptic release.
Brain, 145, 2022
6VZX
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BU of 6vzx by Molmil
Structure of a Covalently Captured Collagen Triple Helix using Lysine-Glutamate Pairs
Descriptor: collagen mimetic peptide
Authors:Miller, M.D, Hulgan, S.A, Xu, W, Kosgei, A.J, Phillips Jr, G.N, Hartgerink, J.D.
Deposit date:2020-02-28
Release date:2020-09-02
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (1.37 Å)
Cite:Covalent Capture of Collagen Triple Helices Using Lysine-Aspartate and Lysine-Glutamate Pairs.
Biomacromolecules, 21, 2020
4UBG
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BU of 4ubg by Molmil
Resting state of rat cysteine dioxygenase C93G variant
Descriptor: Cysteine dioxygenase type 1, FE (II) ION, SODIUM ION
Authors:Fellner, M, Tchesnokov, E.P, Jameson, G.N, Wilbanks, S.M.
Deposit date:2014-08-13
Release date:2014-11-26
Last modified:2023-09-27
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:The Cys-Tyr Cross-Link of Cysteine Dioxygenase Changes the Optimal pH of the Reaction without a Structural Change.
Biochemistry, 53, 2014
6VQP
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BU of 6vqp by Molmil
Structure of CalU17 from the Calicheamicin Biosynthesis Pathway of Micromonospora echinospora
Descriptor: CalU17, CalU17 His-Tagged protein, GLYCEROL, ...
Authors:Kosgei, A.J, Miller, M.D, Xu, W, Van Lanen, S.G, Thorson, J.S, Phillips Jr, G.N.
Deposit date:2020-02-05
Release date:2021-02-17
Last modified:2023-10-11
Method:X-RAY DIFFRACTION (2 Å)
Cite:Structure of DynF from the Dynemicin Biosynthesis Pathway of Micromonospora chersina
To Be Published

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PDB entries from 2024-10-30

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