7EXE
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![BU of 7exe by Molmil](/molmil-images/mine/7exe) | |
7E62
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![BU of 7e62 by Molmil](/molmil-images/mine/7e62) | Mouse TAB2 NZF in complex with Lys6-linked diubiquitin | 分子名称: | 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, TGF-beta-activated kinase 1 and MAP3K7-binding protein 2, Ubiquitin, ... | 著者 | Sato, Y, Li, Y, Okatsu, K, Fukai, S. | 登録日 | 2021-02-21 | 公開日 | 2021-08-18 | 最終更新日 | 2023-11-29 | 実験手法 | X-RAY DIFFRACTION (1.99 Å) | 主引用文献 | Structural basis for specific recognition of K6-linked polyubiquitin chains by the TAB2 NZF domain. Biophys.J., 120, 2021
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1VFG
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![BU of 1vfg by Molmil](/molmil-images/mine/1vfg) | Crystal structure of tRNA nucleotidyltransferase complexed with a primer tRNA and an incoming ATP analog | 分子名称: | DIPHOSPHOMETHYLPHOSPHONIC ACID ADENOSYL ESTER, RNA (75-MER), poly A polymerase | 著者 | Tomita, K, Fukai, S, Ishitani, R, Ueda, T, Takeuchi, N, Vassylyev, D.G, Nureki, O, RIKEN Structural Genomics/Proteomics Initiative (RSGI) | 登録日 | 2004-04-13 | 公開日 | 2004-08-10 | 最終更新日 | 2023-12-27 | 実験手法 | X-RAY DIFFRACTION (2.8 Å) | 主引用文献 | Structural basis for template-independent RNA polymerization. Nature, 430, 2004
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5XWS
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![BU of 5xws by Molmil](/molmil-images/mine/5xws) | Crystal structure of SALM5 LRR-Ig | 分子名称: | 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Leucine-rich repeat and fibronectin type-III domain-containing protein 5 | 著者 | Goto-Ito, S, Yamagata, A, Sato, Y, Fukai, S. | 登録日 | 2017-06-30 | 公開日 | 2018-06-06 | 最終更新日 | 2020-07-29 | 実験手法 | X-RAY DIFFRACTION (3.084 Å) | 主引用文献 | Structural basis of trans-synaptic interactions between PTP delta and SALMs for inducing synapse formation. Nat Commun, 9, 2018
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5XWT
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![BU of 5xwt by Molmil](/molmil-images/mine/5xwt) | Crystal structure of PTPdelta Ig1-Fn1 in complex with SALM5 LRR-Ig | 分子名称: | 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, ... | 著者 | Goto-Ito, S, Yamagata, A, Sato, Y, Fukai, S. | 登録日 | 2017-06-30 | 公開日 | 2018-06-06 | 最終更新日 | 2020-07-29 | 実験手法 | X-RAY DIFFRACTION (4.178 Å) | 主引用文献 | Structural basis of trans-synaptic interactions between PTP delta and SALMs for inducing synapse formation. Nat Commun, 9, 2018
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5XGC
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![BU of 5xgc by Molmil](/molmil-images/mine/5xgc) | Crystal structure of SmgGDS-558 | 分子名称: | Rap1 GTPase-GDP dissociation stimulator 1 | 著者 | Shimizu, H, Toma-Fukai, S, Shimizu, T. | 登録日 | 2017-04-13 | 公開日 | 2017-06-28 | 最終更新日 | 2024-03-27 | 実験手法 | X-RAY DIFFRACTION (2.1 Å) | 主引用文献 | Structure-based analysis of the guanine nucleotide exchange factor SmgGDS reveals armadillo-repeat motifs and key regions for activity and GTPase binding J. Biol. Chem., 292, 2017
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5Y31
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![BU of 5y31 by Molmil](/molmil-images/mine/5y31) | Crystal structure of human LGI1-ADAM22 complex | 分子名称: | 2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, Disintegrin and metalloproteinase domain-containing protein 22, ... | 著者 | Yamagata, A, Fukai, S. | 登録日 | 2017-07-27 | 公開日 | 2018-05-02 | 最終更新日 | 2020-07-29 | 実験手法 | X-RAY DIFFRACTION (7.125 Å) | 主引用文献 | Structural basis of epilepsy-related ligand-receptor complex LGI1-ADAM22. Nat Commun, 9, 2018
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5Y30
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![BU of 5y30 by Molmil](/molmil-images/mine/5y30) | |
5Y2Z
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![BU of 5y2z by Molmil](/molmil-images/mine/5y2z) | Crystal structure of human LGI1 EPTP-ADAM22 complex | 分子名称: | 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, ... | 著者 | Yamagata, A, Fukai, S. | 登録日 | 2017-07-27 | 公開日 | 2018-05-02 | 最終更新日 | 2023-11-22 | 実験手法 | X-RAY DIFFRACTION (2.67 Å) | 主引用文献 | Structural basis of epilepsy-related ligand-receptor complex LGI1-ADAM22. Nat Commun, 9, 2018
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5YJ9
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![BU of 5yj9 by Molmil](/molmil-images/mine/5yj9) | Crystal structure of Tribolium castaneum PINK1 kinase domain in complex with AMP-PNP | 分子名称: | MAGNESIUM ION, PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER, Serine/threonine-protein kinase PINK1, ... | 著者 | Okatsu, K, Sato, Y, Fukai, S. | 登録日 | 2017-10-09 | 公開日 | 2018-07-25 | 実験手法 | X-RAY DIFFRACTION (2.53 Å) | 主引用文献 | Structural insights into ubiquitin phosphorylation by PINK1. Sci Rep, 8, 2018
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5Z8X
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![BU of 5z8x by Molmil](/molmil-images/mine/5z8x) | Crystal structure of human LRRTM2 | 分子名称: | 2-acetamido-2-deoxy-beta-D-glucopyranose, Leucine-rich repeat transmembrane neuronal protein 2 | 著者 | Yamagata, A, Fukai, S. | 登録日 | 2018-02-01 | 公開日 | 2018-10-10 | 最終更新日 | 2023-11-22 | 実験手法 | X-RAY DIFFRACTION (3.15 Å) | 主引用文献 | Structural insights into modulation and selectivity of transsynaptic neurexin-LRRTM interaction. Nat Commun, 9, 2018
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5Z8Y
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![BU of 5z8y by Molmil](/molmil-images/mine/5z8y) | Crystal structure of human LRRTM2 in complex with Neurexin 1beta | 分子名称: | 2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose, CALCIUM ION, ... | 著者 | Yamagata, A, Fukai, S. | 登録日 | 2018-02-01 | 公開日 | 2018-10-10 | 最終更新日 | 2023-11-22 | 実験手法 | X-RAY DIFFRACTION (3.4 Å) | 主引用文献 | Structural insights into modulation and selectivity of transsynaptic neurexin-LRRTM interaction. Nat Commun, 9, 2018
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6A6I
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![BU of 6a6i by Molmil](/molmil-images/mine/6a6i) | Crystal structure of the winged-helix domain of Cockayne syndrome group B protein in complex with ubiquitin | 分子名称: | CHLORIDE ION, Excision repair cross-complementing rodent repair deficiency, complementation group 6 variant, ... | 著者 | Takahashi, T.S, Sato, Y, Fukai, S. | 登録日 | 2018-06-28 | 公開日 | 2019-02-13 | 最終更新日 | 2023-11-22 | 実験手法 | X-RAY DIFFRACTION (2.6 Å) | 主引用文献 | Structural basis of ubiquitin recognition by the winged-helix domain of Cockayne syndrome group B protein. Nucleic Acids Res., 47, 2019
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6IXF
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![BU of 6ixf by Molmil](/molmil-images/mine/6ixf) | |
6IXE
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![BU of 6ixe by Molmil](/molmil-images/mine/6ixe) | Crystal structure of SeMet apo SH3BP5 (I41) | 分子名称: | SH3 domain-binding protein 5, SUCCINIC ACID | 著者 | Goto-Ito, S, Yamagata, A, Sato, Y, Fukai, S. | 登録日 | 2018-12-10 | 公開日 | 2019-03-20 | 最終更新日 | 2019-03-27 | 実験手法 | X-RAY DIFFRACTION (3.35 Å) | 主引用文献 | Structural basis of guanine nucleotide exchange for Rab11 by SH3BP5. Life Sci Alliance, 2, 2019
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6IXV
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![BU of 6ixv by Molmil](/molmil-images/mine/6ixv) | Crystal structure of SH3BP5-Rab11a | 分子名称: | PHOSPHATE ION, Ras-related protein Rab-11A, SH3 domain-binding protein 5 | 著者 | Goto-Ito, S, Yamagata, A, Sato, Y, Fukai, S. | 登録日 | 2018-12-12 | 公開日 | 2019-03-20 | 最終更新日 | 2024-03-27 | 実験手法 | X-RAY DIFFRACTION (3.8 Å) | 主引用文献 | Structural basis of guanine nucleotide exchange for Rab11 by SH3BP5. Life Sci Alliance, 2, 2019
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6J6X
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![BU of 6j6x by Molmil](/molmil-images/mine/6j6x) | Crystal structure of apo GGTaseIII | 分子名称: | (4S)-2-METHYL-2,4-PENTANEDIOL, Geranylgeranyl transferase type-2 subunit beta, MAGNESIUM ION, ... | 著者 | Goto-Ito, S, Yamagata, A, Sato, Y, Fukai, S. | 登録日 | 2019-01-16 | 公開日 | 2020-01-22 | 最終更新日 | 2023-11-22 | 実験手法 | X-RAY DIFFRACTION (2.962 Å) | 主引用文献 | Crystal structure of apo GGTaseIII To Be Published
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6J74
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![BU of 6j74 by Molmil](/molmil-images/mine/6j74) | Complex of GGTaseIII and full-length Ykt6 | 分子名称: | Geranylgeranyl transferase type-2 subunit beta, PHOSPHATE ION, Protein prenyltransferase alpha subunit repeat-containing protein 1, ... | 著者 | Goto-Ito, S, Yamagata, A, Sato, Y, Fukai, S. | 登録日 | 2019-01-16 | 公開日 | 2020-01-22 | 最終更新日 | 2023-11-22 | 実験手法 | X-RAY DIFFRACTION (3.212 Å) | 主引用文献 | Complex of GGTaseIII and full-length Ykt6 To Be Published
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6J7F
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![BU of 6j7f by Molmil](/molmil-images/mine/6j7f) | Complex of GGTaseIII, farnesyl-Ykt6 (C-terminal methylated), and GGPP | 分子名称: | DIPHOSPHATE, FARNESYL, GERAN-8-YL GERAN, ... | 著者 | Goto-Ito, S, Yamagata, A, Sato, Y, Fukai, S. | 登録日 | 2019-01-18 | 公開日 | 2020-01-22 | 最終更新日 | 2023-11-22 | 実験手法 | X-RAY DIFFRACTION (2.883 Å) | 主引用文献 | Complex of GGTaseIII, farnesyl-Ykt6 (C-terminal methylated), and GGPP To Be Published
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6IXG
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![BU of 6ixg by Molmil](/molmil-images/mine/6ixg) | |
6J7X
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![BU of 6j7x by Molmil](/molmil-images/mine/6j7x) | Complex of GGTaseIII, farnesyl-Ykt6, and GGPP | 分子名称: | FORMIC ACID, GERANYLGERANYL DIPHOSPHATE, Geranylgeranyl transferase type-2 subunit beta, ... | 著者 | Goto-Ito, S, Yamagata, A, Sato, Y, Fukai, S. | 登録日 | 2019-01-18 | 公開日 | 2020-01-22 | 最終更新日 | 2023-11-22 | 実験手法 | X-RAY DIFFRACTION (2.75 Å) | 主引用文献 | Complex of GGTaseIII, farnesyl-Ykt6 (C-terminal methylated), and GGPP To Be Published
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7W86
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![BU of 7w86 by Molmil](/molmil-images/mine/7w86) | Crystal structure of the DYW domain of DYW1 | 分子名称: | 1,2-ETHANEDIOL, ACETATE ION, GLYCEROL, ... | 著者 | Sawada, Y, Shimizu, H, Toma-Fukai, S, Shimizu, T. | 登録日 | 2021-12-07 | 公開日 | 2022-12-14 | 最終更新日 | 2024-05-29 | 実験手法 | X-RAY DIFFRACTION (1.8 Å) | 主引用文献 | Structural insight into the activation of an Arabidopsis organellar C-to-U RNA editing enzyme by active site complementation. Plant Cell, 35, 2023
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6KIP
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![BU of 6kip by Molmil](/molmil-images/mine/6kip) | |
3WWQ
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![BU of 3wwq by Molmil](/molmil-images/mine/3wwq) | |
3VU8
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![BU of 3vu8 by Molmil](/molmil-images/mine/3vu8) | Metionyl-tRNA synthetase from Thermus thermophilus complexed with methionyl-adenylate analogue | 分子名称: | Methionine--tRNA ligase, N-[METHIONYL]-N'-[ADENOSYL]-DIAMINOSULFONE, ZINC ION | 著者 | Konno, M, Kato-Murayama, M, Toma-Fukai, S, Uchikawa, E, Nureki, O, Yokoyama, S. | 登録日 | 2012-06-22 | 公開日 | 2013-06-26 | 最終更新日 | 2023-11-08 | 実験手法 | X-RAY DIFFRACTION (2.2 Å) | 主引用文献 | The modeling of structures of specific conformation of homosysteine-AMP leading to thiolactone-formation on class Ia aminoacyl-tRNA synthetases To be Published
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