PDB Search results for query - 일본 단백질구조 데이터 뱅크

PDB: 115 results

MHC CLASS I H-2KB HEAVY CHAIN COMPLEXED WITH BETA-2 MICROGLOBULIN AND CHICKEN OVALBUMIN
Descriptor:	BETA-2 MICROGLOBULIN, CHICKEN OVALBUMIN, MHC CLASS I H-2KB HEAVY CHAIN
Authors:	Fremont, D.H, Wilson, I.A.
Deposit date:	1994-11-01
Release date:	1996-06-20
Last modified:	2024-06-05
Method:	X-RAY DIFFRACTION (2.5 Å)
Cite:	Crystal structure of an H-2Kb-ovalbumin peptide complex reveals the interplay of primary and secondary anchor positions in the major histocompatibility complex binding groove. Proc.Natl.Acad.Sci.USA, 92, 1995

1VAD

MHC CLASS I H-2KB HEAVY CHAIN COMPLEXED WITH BETA-2 MICROGLOBULIN AND YEAST ALPHA-GLUCOSIDASE
Descriptor:	BETA-2 MICROGLOBULIN, MHC CLASS I H-2KB HEAVY CHAIN, YEAST ALPHA-GLUCOSIDASE
Authors:	Fremont, D.H, Wilson, I.A.
Deposit date:	1994-11-01
Release date:	1996-06-20
Last modified:	2024-06-05
Method:	X-RAY DIFFRACTION (2.5 Å)
Cite:	Crystal structure of an H-2Kb-ovalbumin peptide complex reveals the interplay of primary and secondary anchor positions in the major histocompatibility complex binding groove. Proc.Natl.Acad.Sci.USA, 92, 1995

3M5R

Crystal Structure of Swine Flu Virus NS1 Effector Domain from H1N1 Influenza A/California/07/2009
Descriptor:	Nonstructural protein 1
Authors:	Fremont, D.H, Yu, Y.Y.L, Nelson, C.A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:	2010-03-13
Release date:	2010-04-07
Last modified:	2023-09-06
Method:	X-RAY DIFFRACTION (2 Å)
Cite:	Crystal Structure of Swine Flu Virus NS1 Effector Domain from H1N1 Influenza A/California/07/2009 To be Published

3OQ3

Structural Basis of Type-I Interferon Sequestration by a Poxvirus Decoy Receptor
Descriptor:	1,2-ETHANEDIOL, 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, ACETATE ION, ...
Authors:	Fremont, D.H, Lee, C.A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:	2010-09-02
Release date:	2011-05-18
Last modified:	2023-09-06
Method:	X-RAY DIFFRACTION (2.1 Å)
Cite:	Structural Basis of Type-I Interferon Sequestration by a Poxvirus Decoy Receptor To be Published

2VAB

MHC CLASS I H-2KB HEAVY CHAIN COMPLEXED WITH BETA-2 MICROGLOBULIN AND SENDAI VIRUS NUCLEOPROTEIN
Descriptor:	BETA-2 MICROGLOBULIN, MHC CLASS I H-2KB HEAVY CHAIN, SENDAI VIRUS NUCLEOPROTEIN
Authors:	Fremont, D.H, Wilson, I.A.
Deposit date:	1994-11-01
Release date:	1996-06-20
Last modified:	2024-06-05
Method:	X-RAY DIFFRACTION (2.5 Å)
Cite:	Crystal structures of two viral peptides in complex with murine MHC class I H-2Kb. Science, 257, 1992

2VAA

MHC CLASS I H-2KB HEAVY CHAIN COMPLEXED WITH BETA-2 MICROGLOBULIN AND VESICULAR STOMATITIS VIRUS NUCLEOPROTEIN
Descriptor:	BETA-2 MICROGLOBULIN, MHC CLASS I H-2KB HEAVY CHAIN, VESICULAR STOMATITIS VIRUS NUCLEOPROTEIN
Authors:	Fremont, D.H, Wilson, I.A.
Deposit date:	1994-11-01
Release date:	1996-06-20
Last modified:	2024-06-05
Method:	X-RAY DIFFRACTION (2.3 Å)
Cite:	Crystal structures of two viral peptides in complex with murine MHC class I H-2Kb. Science, 257, 1992

6ORT

Crystal Structure of Bos taurus Mxra8 Ectodomain
Descriptor:	4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID, CHLORIDE ION, Matrix remodeling-associated protein 8
Authors:	Fremont, D.H, Kim, A.S, Nelson, C.A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:	2019-04-30
Release date:	2020-03-04
Last modified:	2023-10-11
Method:	X-RAY DIFFRACTION (2.3 Å)
Cite:	An Evolutionary Insertion in the Mxra8 Receptor-Binding Site Confers Resistance to Alphavirus Infection and Pathogenesis. Cell Host Microbe, 27, 2020

6NK3

Crystal structure of murine Mxra8 ectodomain
Descriptor:	Matrix remodeling-associated protein 8
Authors:	Fremont, D.H, Kim, A.S, Nelson, C.A, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:	2019-01-04
Release date:	2019-05-22
Last modified:	2023-10-11
Method:	X-RAY DIFFRACTION (2.2 Å)
Cite:	Cryo-EM Structure of Chikungunya Virus in Complex with the Mxra8 Receptor. Cell, 177, 2019

1PSH

CRYSTAL STRUCTURE OF PHOSPHOLIPASE A2 FROM INDIAN COBRA REVEALS A TRIMERIC ASSOCIATION
Descriptor:	CALCIUM ION, PHOSPHOLIPASE A2
Authors:	Fremont, D, Xuong, N.-H, Wilson, I.
Deposit date:	1992-07-28
Release date:	1994-01-31
Last modified:	2024-06-05
Method:	X-RAY DIFFRACTION (2.3 Å)
Cite:	Crystal structure of phospholipase A2 from Indian cobra reveals a trimeric association. Proc.Natl.Acad.Sci.USA, 90, 1993

1EYH

CRYSTAL STRUCTURE OF THE EPSIN N-TERMINAL HOMOLOGY (ENTH) DOMAIN AT 1.56 ANGSTROM RESOLUTION
Descriptor:	EPSIN
Authors:	Fremont, D.H.
Deposit date:	2000-05-06
Release date:	2000-06-07
Last modified:	2024-02-07
Method:	X-RAY DIFFRACTION (1.56 Å)
Cite:	CRYSTAL STRUCTURE OF THE EPSIN N-TERMINAL HOMOLOGY (ENTH) DOMAIN AT 1.56 ANGSTROM RESOLUTION To be Published

1IEB

HISTOCOMPATIBILITY ANTIGEN
Descriptor:	2-acetamido-2-deoxy-beta-D-glucopyranose, MHC CLASS II I-EK, SULFATE ION
Authors:	Fremont, D.H, Hendrickson, W.A, Marrack, P, Kappler, J.
Deposit date:	1996-04-05
Release date:	1997-06-05
Last modified:	2023-08-09
Method:	X-RAY DIFFRACTION (2.7 Å)
Cite:	Structures of an MHC class II molecule with covalently bound single peptides. Science, 272, 1996

1IEA

HISTOCOMPATIBILITY ANTIGEN
Descriptor:	2-acetamido-2-deoxy-beta-D-glucopyranose, MHC CLASS II I-EK
Authors:	Fremont, D.H, Hendrickson, W.A, Marrack, P, Kappler, J.
Deposit date:	1996-04-05
Release date:	1997-06-05
Last modified:	2023-08-09
Method:	X-RAY DIFFRACTION (2.3 Å)
Cite:	Structures of an MHC class II molecule with covalently bound single peptides. Science, 272, 1996

1IAK

HISTOCOMPATIBILITY ANTIGEN I-AK
Descriptor:	2-acetamido-2-deoxy-beta-D-glucopyranose, MHC CLASS II I-AK
Authors:	Fremont, D.H, Unanue, E.R, Hendrickson, W.A.
Deposit date:	1997-11-18
Release date:	1998-04-15
Last modified:	2023-08-09
Method:	X-RAY DIFFRACTION (1.9 Å)
Cite:	Crystal structure of I-Ak in complex with a dominant epitope of lysozyme. Immunity, 8, 1998

1KTD

CRYSTAL STRUCTURE OF CLASS II MHC MOLECULE IEK BOUND TO PIGEON CYTOCHROME C PEPTIDE
Descriptor:	2-acetamido-2-deoxy-beta-D-glucopyranose, Fusion protein consisting of cytochrome C peptide, glycine rich linker, ...
Authors:	Fremont, D.H, Dai, S, Chiang, H, Crawford, F, Marrack, P, Kappler, J.
Deposit date:	2002-01-15
Release date:	2002-05-01
Last modified:	2020-07-29
Method:	X-RAY DIFFRACTION (2.4 Å)
Cite:	Structural basis of cytochrome c presentation by IE(k). J.Exp.Med., 195, 2002

1KT2

CRYSTAL STRUCTURE OF CLASS II MHC MOLECULE IEK BOUND TO MOTH CYTOCHROME C PEPTIDE
Descriptor:	2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Fusion protein consisting of cytochrome C peptide, ...
Authors:	Fremont, D.H, Dai, S, Chiang, H, Crawford, F, Marrack, P, Kappler, J.
Deposit date:	2002-01-15
Release date:	2002-05-01
Last modified:	2020-07-29
Method:	X-RAY DIFFRACTION (2.8 Å)
Cite:	Structural basis of cytochrome c presentation by IE(k). J.Exp.Med., 195, 2002

1K8I

CRYSTAL STRUCTURE OF MOUSE H2-DM
Descriptor:	2-acetamido-2-deoxy-beta-D-glucopyranose, MHC class II H2-M alpha chain, MHC class II H2-M beta 2 chain
Authors:	Fremont, D.H, Crawford, F, Marrack, P, Hendrickson, W, Kappler, J.
Deposit date:	2001-10-24
Release date:	2001-12-05
Last modified:	2020-07-29
Method:	X-RAY DIFFRACTION (3.1 Å)
Cite:	Crystal structure of mouse H2-M. Immunity, 9, 1998

7MKM

SARS-CoV-2 Spike RBD in complex with neutralizing Fab SARS2-38 (local refinement)
Descriptor:	2-acetamido-2-deoxy-beta-D-glucopyranose, SARS2-38 Fv heavy chain, SARS2-38 Fv light chain, ...
Authors:	Adams, L.J, Fremont, D.H, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:	2021-04-24
Release date:	2021-05-12
Last modified:	2021-12-01
Method:	ELECTRON MICROSCOPY (3.16 Å)
Cite:	A potently neutralizing SARS-CoV-2 antibody inhibits variants of concern by utilizing unique binding residues in a highly conserved epitope. Immunity, 54, 2021

7MKL

SARS-CoV-2 Spike in complex with neutralizing Fab SARS2-38 (three down conformation)
Descriptor:	2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, SARS2-38 Fv heavy chain, ...
Authors:	Adams, L.J, Fremont, D.H, Center for Structural Genomics of Infectious Diseases (CSGID)
Deposit date:	2021-04-24
Release date:	2021-05-12
Last modified:	2021-12-01
Method:	ELECTRON MICROSCOPY (3.2 Å)
Cite:	A potently neutralizing SARS-CoV-2 antibody inhibits variants of concern by utilizing unique binding residues in a highly conserved epitope. Immunity, 54, 2021

4E4D

Crystal structure of mouse RANKL-OPG complex
Descriptor:	CHLORIDE ION, Tumor necrosis factor ligand superfamily member 11, soluble form, ...
Authors:	Nelson, C.A, Fremont, D.H.
Deposit date:	2012-03-12
Release date:	2012-10-24
Last modified:	2023-09-13
Method:	X-RAY DIFFRACTION (2.7 Å)
Cite:	RANKL Employs Distinct Binding Modes to Engage RANK and the Osteoprotegerin Decoy Receptor. Structure, 20, 2012

4ZLT

Crystal structure of viral chemokine binding protein R17 in complex with CCL3
Descriptor:	2-acetamido-2-deoxy-beta-D-glucopyranose, C-C motif chemokine 3, Putative uncharacterized protein
Authors:	Lubman, O.Y, Fremont, D.H.
Deposit date:	2015-05-01
Release date:	2015-11-18
Last modified:	2023-09-27
Method:	X-RAY DIFFRACTION (3 Å)
Cite:	Parallel Evolution of Chemokine Binding by Structurally Related Herpesvirus Decoy Receptors. Structure, 24, 2016

4ZKQ

Viral chemokine binding protein R17 encoded by rodent gammaherpesvirus Peru ( RHVP)
Descriptor:	2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Putative uncharacterized protein
Authors:	Lubman, O.Y, Fremont, D.H.
Deposit date:	2015-04-30
Release date:	2015-11-18
Last modified:	2020-07-29
Method:	X-RAY DIFFRACTION (1.898 Å)
Cite:	Parallel Evolution of Chemokine Binding by Structurally Related Herpesvirus Decoy Receptors. Structure, 24, 2016

6E47

Crystal Structure of the Murine Norovirus VP1 P domain in complex with the CD300lf Receptor and Glycochenodeoxycholic Acid
Descriptor:	1,2-ETHANEDIOL, CMRF35-like molecule 1, GLYCOCHENODEOXYCHOLIC ACID, ...
Authors:	Nelson, C.A, Fremont, D.H.
Deposit date:	2018-07-16
Release date:	2018-09-12
Last modified:	2023-10-11
Method:	X-RAY DIFFRACTION (1.95 Å)
Cite:	Structural basis for murine norovirus engagement of bile acids and the CD300lf receptor. Proc. Natl. Acad. Sci. U.S.A., 115, 2018

6E48

Crystal Structure of the Murine Norovirus VP1 P domain in complex with the CD300lf Receptor and Lithocholic Acid
Descriptor:	(3beta,5beta,14beta,17alpha)-3-hydroxycholan-24-oic acid, 1,2-ETHANEDIOL, CALCIUM ION, ...
Authors:	Nelson, C.A, Fremont, D.H.
Deposit date:	2018-07-16
Release date:	2018-09-12
Last modified:	2023-10-11
Method:	X-RAY DIFFRACTION (1.801 Å)
Cite:	Structural basis for murine norovirus engagement of bile acids and the CD300lf receptor. Proc. Natl. Acad. Sci. U.S.A., 115, 2018

8DAQ

CryoEM structure of Western equine encephalitis virus VLP
Descriptor:	2-acetamido-2-deoxy-beta-D-glucopyranose, E1 envelope glycoprotein, E2 envelope glycoprotein
Authors:	Zimmerman, M.I, Fremont, D.H, Center for Structural Genomics of Infectious Diseases (CSGID), Center for Structural Biology of Infectious Diseases (CSBID)
Deposit date:	2022-06-13
Release date:	2023-12-20
Method:	ELECTRON MICROSCOPY (4.35 Å)
Cite:	Alternate repeat domain usage in an alphavirus entry receptor enables host species expansion To Be Published

8DAN

CryoEM structure of Western equine encephalitis virus VLP in complex with the avian MXRA8 receptor
Descriptor:	2-acetamido-2-deoxy-beta-D-glucopyranose, E1 envelope glycoprotein, E2 envelope glycoprotein, ...
Authors:	Zimmerman, M.I, Fremont, D.H, Center for Structural Genomics of Infectious Diseases (CSGID), Center for Structural Biology of Infectious Diseases (CSBID)
Deposit date:	2022-06-13
Release date:	2023-12-20
Method:	ELECTRON MICROSCOPY (4.74 Å)
Cite:	Alternate domain repeat usage in an alphavirus entry receptor enables host species expansion To Be Published

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Total results:	115
Displayed results:	25
Sorted by:	Hit score (from highest)
Deposition authors:	"Fremont, D"