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PDB: 434 results

8YSA
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The co-crystal structure of SARS-CoV-2 Mpro in complex with compound H102
Descriptor: 3C-like proteinase nsp5, BOC-TBG-PHE-ELL
Authors:Zheng, W.Y, Fu, L.F, Feng, Y, Han, P, Qi, J.X.
Deposit date:2024-03-22
Release date:2024-05-08
Method:X-RAY DIFFRACTION (1.5 Å)
Cite:Discovery, Biological Activity, and Structural Mechanism of a Potent Inhibitor of SARS-CoV-2 Main Protease
To Be Published
8X39
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Crystal structure of cellulosomal double-dockerin module of Clo1313_0689 from Clostridium thermocellum
Descriptor: CALCIUM ION, Serine protease
Authors:Chen, C, Dong, S, Feng, Y.
Deposit date:2023-11-12
Release date:2024-04-03
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:A cellulosomal double-dockerin module from Clostridium thermocellum shows distinct structural and cohesin-binding features.
Protein Sci., 33, 2024
5NLL
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CLOSTRIDIUM BEIJERINCKII FLAVODOXIN: OXIDIZED
Descriptor: FLAVIN MONONUCLEOTIDE, FLAVODOXIN
Authors:Ludwig, M.L, Pattridge, K.A, Metzger, A.L, Dixon, M.M, Eren, M, Feng, Y, Swenson, R.
Deposit date:1996-12-23
Release date:1997-03-12
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Control of oxidation-reduction potentials in flavodoxin from Clostridium beijerinckii: the role of conformation changes.
Biochemistry, 36, 1997
5NUL
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CLOSTRIDIUM BEIJERINCKII FLAVODOXIN MUTANT: G57T SEMIQUINONE (150K)
Descriptor: FLAVIN MONONUCLEOTIDE, FLAVODOXIN
Authors:Ludwig, M.L, Pattridge, K.A, Metzger, A.L, Dixon, M.M, Eren, M, Feng, Y, Swenson, R.
Deposit date:1996-12-20
Release date:1997-03-12
Last modified:2021-11-03
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Control of oxidation-reduction potentials in flavodoxin from Clostridium beijerinckii: the role of conformation changes.
Biochemistry, 36, 1997
8X3A
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BU of 8x3a by Molmil
Solution NMR structure of cellulosomal double-dockerin module of Clo1313_0689 from Clostridium thermocellum
Descriptor: CALCIUM ION, Serine protease
Authors:Chen, C, Feng, Y.
Deposit date:2023-11-12
Release date:2024-04-03
Last modified:2024-05-15
Method:SOLUTION NMR
Cite:A cellulosomal double-dockerin module from Clostridium thermocellum shows distinct structural and cohesin-binding features.
Protein Sci., 33, 2024
1FLA
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BU of 1fla by Molmil
CLOSTRIDIUM BEIJERINCKII FLAVODOXIN MUTANT: G57D REDUCED
Descriptor: FLAVIN MONONUCLEOTIDE, FLAVODOXIN
Authors:Ludwig, M.L, Pattridge, K.A, Metzger, A.L, Dixon, M.M, Eren, M, Feng, Y, Swenson, R.
Deposit date:1996-12-18
Release date:1997-03-12
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Control of oxidation-reduction potentials in flavodoxin from Clostridium beijerinckii: the role of conformation changes.
Biochemistry, 36, 1997
1FLD
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BU of 1fld by Molmil
CLOSTRIDIUM BEIJERINCKII FLAVODOXIN MUTANT: G57T OXIDIZED
Descriptor: FLAVIN MONONUCLEOTIDE, FLAVODOXIN
Authors:Ludwig, M.L, Pattridge, K.A, Metzger, A.L, Dixon, M.M, Eren, M, Feng, Y, Swenson, R.
Deposit date:1996-12-17
Release date:1997-03-12
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Control of oxidation-reduction potentials in flavodoxin from Clostridium beijerinckii: the role of conformation changes.
Biochemistry, 36, 1997
1FLN
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BU of 1fln by Molmil
CLOSTRIDIUM BEIJERINCKII FLAVODOXIN MUTANT: D58P REDUCED
Descriptor: FLAVIN MONONUCLEOTIDE, FLAVODOXIN
Authors:Ludwig, M.L, Pattridge, K.A, Metzger, A.L, Dixon, M.M, Eren, M, Feng, Y, Swenson, R.
Deposit date:1996-12-18
Release date:1997-03-12
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Control of oxidation-reduction potentials in flavodoxin from Clostridium beijerinckii: the role of conformation changes.
Biochemistry, 36, 1997
1FVX
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BU of 1fvx by Molmil
CLOSTRIDIUM BEIJERINCKII FLAVODOXIN MUTANT: G57N OXIDIZED
Descriptor: FLAVIN MONONUCLEOTIDE, FLAVODOXIN
Authors:Ludwig, M.L, Pattridge, K.A, Metzger, A.L, Dixon, M.M, Eren, M, Feng, Y, Swenson, R.
Deposit date:1996-12-12
Release date:1997-03-12
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Control of oxidation-reduction potentials in flavodoxin from Clostridium beijerinckii: the role of conformation changes.
Biochemistry, 36, 1997
1APC
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BU of 1apc by Molmil
SOLUTION STRUCTURE OF APOCYTOCHROME B562
Descriptor: CYTOCHROME B562
Authors:Wand, A.J, Feng, Y, Sligar, S.G.
Deposit date:1993-10-14
Release date:1994-01-31
Last modified:2024-04-10
Method:SOLUTION NMR
Cite:Solution structure of apocytochrome b562.
Nat.Struct.Biol., 1, 1994
1YYB
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BU of 1yyb by Molmil
Solution structure of 1-26 fragment of human programmed cell death 5 protein
Descriptor: Programmed cell death protein 5
Authors:Liu, D.S, Feng, Y.G, Yao, H.W, Wang, J.F.
Deposit date:2005-02-24
Release date:2005-09-13
Last modified:2022-03-02
Method:SOLUTION NMR
Cite:The N-terminal 26-residue fragment of human programmed cell death 5 protein can form a stable alpha-helix having unique electrostatic potential character.
Biochem.J., 392, 2005
4WVX
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BU of 4wvx by Molmil
Crystal structure of a phosphotriesterase-like lactonase Gkap in native form
Descriptor: 1,2-ETHANEDIOL, COBALT (II) ION, Phosphotriesterase
Authors:An, J, Zhang, Y, Yang, G.Y, Feng, Y.
Deposit date:2014-11-07
Release date:2015-11-11
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Engineering a thermostable lactonase for enhanced phosphotriesterase activity against organophosphate pesticides
To Be Published
2DD8
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BU of 2dd8 by Molmil
Crystal Structure of SARS-CoV Spike Receptor-Binding Domain Complexed with Neutralizing Antibody
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, IGG Heavy Chain, IGG Light Chain, ...
Authors:Prabakaran, P, Gan, J.H, Feng, Y, Zhu, Z.Y, Xiao, X.D, Ji, X, Dimitrov, D.S.
Deposit date:2006-01-24
Release date:2006-04-04
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structure of Severe Acute Respiratory Syndrome Coronavirus Receptor-binding Domain Complexed with Neutralizing Antibody
J.Biol.Chem., 281, 2006
2G75
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BU of 2g75 by Molmil
Crystal Structure of anti-SARS m396 Antibody
Descriptor: IGG Heavy Chain, IGG Light Chain
Authors:Prabakaran, P, Gan, J.H, Feng, Y, Zhu, Z.Y, Xiao, X.D, Ji, X, Dimitrov, D.S.
Deposit date:2006-02-27
Release date:2006-04-04
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2.28 Å)
Cite:Structure of severe acute respiratory syndrome coronavirus receptor-binding domain complexed with neutralizing antibody.
J.Biol.Chem., 281, 2006
1KU5
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BU of 1ku5 by Molmil
Crystal Structure of recombinant histone HPhA from hyperthermophilic archaeon Pyrococcus horikoshii OT3
Descriptor: ACETATE ION, HPhA, SULFATE ION
Authors:Li, T, Sun, F, Ji, X, Feng, Y, Rao, Z.
Deposit date:2002-01-21
Release date:2003-08-26
Last modified:2023-10-25
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Structure based hyperthermostability of archaeal histone HPhA from Pyrococcus horikoshii
J.MOL.BIOL., 325, 2003
7CGW
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BU of 7cgw by Molmil
Complex structure of PD-1 and tislelizumab Fab
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose, Heavy chain of tislelizumab Fab, Light chain of tislelizumab Fab, ...
Authors:Hong, Y, Feng, Y.C, Liu, Y.
Deposit date:2020-07-02
Release date:2021-04-07
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (3.2 Å)
Cite:Tislelizumab uniquely binds to the CC' loop of PD-1 with slow-dissociated rate and complete PD-L1 blockage.
Febs Open Bio, 11, 2021
4X0V
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BU of 4x0v by Molmil
Structure of a GH5 family lichenase from Caldicellulosiruptor sp. F32
Descriptor: Beta-1,3-1,4-glucanase
Authors:Meng, D, Liu, X, Wang, X, Li, F, Feng, Y.
Deposit date:2014-11-24
Release date:2015-11-25
Last modified:2023-11-08
Method:X-RAY DIFFRACTION (2.798 Å)
Cite:Structural Insights into the Substrate Specificity of a Glycoside Hydrolase Family 5 Lichenase from Caldicellulosiruptor sp. F32
Biochem. J., 2017
7CCF
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BU of 7ccf by Molmil
Mechanism insights on steroselective oxidation of phosphorylated ethylphenols with cytochrome P450 CreJ
Descriptor: (3-ethylphenyl) dihydrogen phosphate, Cytochrome P450, PROTOPORPHYRIN IX CONTAINING FE
Authors:Dong, S, Du, L, Li, S.Y, Feng, Y.G.
Deposit date:2020-06-17
Release date:2021-03-17
Last modified:2023-11-29
Method:X-RAY DIFFRACTION (2.8 Å)
Cite:Structural Basis for Selective Oxidation of Phosphorylated Ethylphenols by Cytochrome P450 Monooxygenase CreJ.
Appl.Environ.Microbiol., 87, 2021
2F3W
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BU of 2f3w by Molmil
solution structure of 1-110 fragment of staphylococcal nuclease in 2M TMAO
Descriptor: Thermonuclease
Authors:Liu, D, Xie, T, Feng, Y, Shan, L, Ye, K, Wang, J.
Deposit date:2005-11-22
Release date:2006-12-05
Last modified:2022-03-09
Method:SOLUTION NMR
Cite:Folding stability and cooperativity of the three forms of 1-110 residues fragment of staphylococcal nuclease
Biophys.J., 92, 2007
8EFJ
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A structural study of selectivity mechanisms for JNK3 and p38 alpha with indazole scaffold probing compounds
Descriptor: (4P)-4-[5-(2-chloro-6-fluoroanilino)-6-(methoxymethyl)-1H-indazol-1-yl]-N-methylthiophene-2-carboxamide, Mitogen-activated protein kinase 14, octyl beta-D-glucopyranoside
Authors:Park, H, Feng, Y.
Deposit date:2022-09-08
Release date:2023-09-20
Method:X-RAY DIFFRACTION (2.31 Å)
Cite:A structural study of selectivity mechanisms for JNK3 and p38 alpha with indazole scaffold probing compounds
To Be Published
2F3V
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Solution structure of 1-110 fragment of staphylococcal nuclease with V66W mutation
Descriptor: Thermonuclease
Authors:Liu, D, Xie, T, Feng, Y, Shan, L, Ye, K, Wang, J.
Deposit date:2005-11-22
Release date:2006-12-05
Last modified:2021-11-10
Method:SOLUTION NMR
Cite:Folding stability and cooperativity of the three forms of 1-110 residues fragment of staphylococcal nuclease
Biophys.J., 92, 2007
2FDX
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BU of 2fdx by Molmil
CLOSTRIDIUM BEIJERINCKII FLAVODOXIN MUTANT N137A OXIDIZED
Descriptor: FLAVIN MONONUCLEOTIDE, FLAVODOXIN
Authors:Ludwig, M.L, Pattridge, K.A, Metzger, A.L, Dixon, M.M, Eren, M, Feng, Y, Swenson, R.
Deposit date:1996-12-24
Release date:1997-04-01
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Control of oxidation-reduction potentials in flavodoxin from Clostridium beijerinckii: the role of conformation changes.
Biochemistry, 36, 1997
2FLV
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CLOSTRIDIUM BEIJERINCKII FLAVODOXIN MUTANT: G57T REDUCED (150K)
Descriptor: FLAVIN MONONUCLEOTIDE, FLAVODOXIN
Authors:Ludwig, M.L, Pattridge, K.A, Metzger, A.L, Dixon, M.M, Eren, M, Feng, Y, Swenson, R.
Deposit date:1996-12-19
Release date:1997-03-12
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Control of oxidation-reduction potentials in flavodoxin from Clostridium beijerinckii: the role of conformation changes.
Biochemistry, 36, 1997
2FAX
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BU of 2fax by Molmil
CLOSTRIDIUM BEIJERINCKII FLAVODOXIN MUTANT: N137A OXIDIZED (150K)
Descriptor: FLAVIN MONONUCLEOTIDE, FLAVODOXIN
Authors:Ludwig, M.L, Pattridge, K.A, Metzger, A.L, Dixon, M.M, Eren, M, Feng, Y, Swenson, R.
Deposit date:1996-12-24
Release date:1997-03-12
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Control of oxidation-reduction potentials in flavodoxin from Clostridium beijerinckii: the role of conformation changes.
Biochemistry, 36, 1997
2FVX
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CLOSTRIDIUM BEIJERINCKII FLAVODOXIN MUTANT: G57T REDUCED (277K)
Descriptor: FLAVIN MONONUCLEOTIDE, FLAVODOXIN
Authors:Ludwig, M.L, Pattridge, K.A, Metzger, A.L, Dixon, M.M, Eren, M, Feng, Y, Swenson, R.
Deposit date:1996-12-19
Release date:1997-03-12
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Control of oxidation-reduction potentials in flavodoxin from Clostridium beijerinckii: the role of conformation changes.
Biochemistry, 36, 1997

219869

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