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PDB: 28 件

1LE5
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Crystal structure of a NF-kB heterodimer bound to an IFNb-kB
分子名称: 5'-D(*AP*AP*GP*GP*AP*AP*TP*TP*TP*CP*CP*C)-3', 5'-D(*TP*GP*GP*GP*AP*AP*AP*TP*TP*CP*CP*T)-3', Nuclear factor NF-kappa-B p50 subunit, ...
著者Berkowitz, B, Huang, D.B, Chen-Park, F.E, Sigler, P.B, Ghosh, G.
登録日2002-04-09
公開日2003-04-15
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (2.75 Å)
主引用文献The X-ray crystal structure of the NF-kB p50/p65 heterodimer bound to the Interferon beta-kB site
J.Biol.Chem., 277, 2002
3PCQ
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Femtosecond X-ray protein Nanocrystallography
分子名称: 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE, 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE, BETA-CAROTENE, ...
著者Chapman, H.N, Fromme, P, Barty, A, White, T.A, Kirian, R.A, Aquila, A, Hunter, M.S, Schulz, J, Deponte, D.P, Weierstall, U, Doak, R.B, Maia, F.R.N.C, Martin, A.V, Schlichting, I, Lomb, L, Coppola, N, Shoeman, R.L, Epp, S.W, Hartmann, R, Rolles, D, Rudenko, A, Foucar, L, Kimmel, N, Weidenspointner, G, Holl, P, Liang, M, Barthelmess, M, Caleman, C, Boutet, S, Bogan, M.J, Krzywinski, J, Bostedt, C, Bajt, S, Gumprecht, L, Rudek, B, Erk, B, Schmidt, C, Homke, A, Reich, C, Pietschner, D, Struder, L, Hauser, G, Gorke, H, Ullrich, J, Herrmann, S, Schaller, G, Schopper, F, Soltau, H, Kuhnel, K.-U, Messerschmidt, M, Bozek, J.D, Hau-Riege, S.P, Frank, M, Hampton, C.Y, Sierra, R, Starodub, D, Williams, G.J, Hajdu, J, Timneanu, N, Seibert, M.M, Andreasson, J, Rocker, A, Jonsson, O, Svenda, M, Stern, S, Nass, K, Andritschke, R, Schroter, C.-D, Krasniqi, F, Bott, M, Schmidt, K.E, Wang, X, Grotjohann, I, Holton, J.M, Barends, T.R.M, Neutze, R, Marchesini, S, Fromme, R, Schorb, S, Rupp, D, Adolph, M, Gorkhover, T, Andersson, I, Hirsemann, H, Potdevin, G, Graafsma, H, Nilsson, B, Spence, J.C.H.
登録日2010-10-21
公開日2011-02-02
最終更新日2024-10-30
実験手法X-RAY DIFFRACTION (8.984 Å)
主引用文献Femtosecond X-ray protein nanocrystallography.
Nature, 470, 2011
4AC5
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Lipidic sponge phase crystal structure of the Bl. viridis reaction centre solved using serial femtosecond crystallography
分子名称: 15-cis-1,2-dihydroneurosporene, BACTERIOCHLOROPHYLL B, BACTERIOPHEOPHYTIN B, ...
著者Johansson, L.C, Arnlund, D, White, T.A, Katona, G, DePonte, D.P, Weierstall, U, Doak, R.B, Shoeman, R.L, Lomb, L, Malmerberg, E, Davidsson, J, Nass, K, Liang, M, Andreasson, J, Aquila, A, Bajt, S, Barthelmess, M, Barty, A, Bogan, M.J, Bostedt, C, Bozek, J.D, Caleman, C, Coffee, R, Coppola, N, Ekeberg, T, Epp, S.W, Erk, B, Fleckenstein, H, Foucar, L, Graafsma, H, Gumprecht, L, Hajdu, J, Hampton, C.Y, Hartmann, R, Hartmann, A, Hauser, G, Hirsemann, H, Holl, P, Hunter, M.S, Kassemeyer, S, Kimmel, N, Kirian, R.A, Maia, F.R.N.C, Marchesini, S, Martin, A.V, Reich, C, Rolles, D, Rudek, B, Rudenko, A, Schlichting, I, Schulz, J, Seibert, M.M, Sierra, R, Soltau, H, Starodub, D, Stellato, F, Stern, S, Struder, L, Timneanu, N, Ullrich, J, Wahlgren, W.Y, Wang, X, Weidenspointner, G, Wunderer, C, Fromme, P, Chapman, H.N, Spence, J.C.H, Neutze, R.
登録日2011-12-14
公開日2012-02-15
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (8.2 Å)
主引用文献Lipidic Phase Membrane Protein Serial Femtosecond Crystallography.
Nat.Methods, 9, 2012
4V2K
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Crystal structure of the thiosulfate dehydrogenase TsdA in complex with thiosulfate
分子名称: HEME C, THIOSULFATE, THIOSULFATE DEHYDROGENASE
著者Grabarczyk, D.B, Chappell, P.E, Eisel, B, Johnson, S, Lea, S.M, Berks, B.C.
登録日2014-10-10
公開日2015-02-18
最終更新日2024-01-10
実験手法X-RAY DIFFRACTION (1.29 Å)
主引用文献Mechanism of Thiosulfate Oxidation in the Soxa Family of Cysteine-Ligated Cytochromes
J.Biol.Chem., 290, 2015
1H32
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Reduced SoxAX complex from Rhodovulum sulfidophilum
分子名称: 1,2-ETHANEDIOL, CYTOCHROME C, DIHEME CYTOCHROME C, ...
著者Bamford, V.A, Bruno, S, Rasmussen, T, Appia-Ayme, C, Cheesman, M.R, Berks, B.C, Hemmings, A.M.
登録日2002-08-21
公開日2002-11-07
最終更新日2024-10-09
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Structural Basis for the Oxidation of Thiosulfate by a Sulfur Cycle Enzyme
Embo J., 21, 2002
4UWQ
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Crystal structure of the disulfide-linked complex of the thiosulfodyrolase SoxB with the carrier-protein SoxYZ from Thermus thermophilus
分子名称: MANGANESE (II) ION, SOXY PROTEIN, SOXZ, ...
著者Grabarczyk, D.B, Chappell, P.E, Johnson, S, Stelzl, L.S, Lea, S.M, Berks, B.C.
登録日2014-08-14
公開日2015-12-09
最終更新日2024-10-23
実験手法X-RAY DIFFRACTION (3.28 Å)
主引用文献Structural Basis for Specificity and Promiscuity in a Carrier Protein/Enzyme System from the Sulfur Cycle
Proc.Natl.Acad.Sci.USA, 112, 2015
3ZWU
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Pseudomonas fluorescens PhoX in complex with vanadate, a transition state analogue
分子名称: ALKALINE PHOSPHATASE PHOX, CALCIUM ION, CHLORIDE ION, ...
著者Yong, S.C, Roversi, P, Lillington, J.E.D, Zeldin, O.B, Garman, E.F, Lea, S.M, Berks, B.C.
登録日2011-08-02
公開日2012-08-08
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.39 Å)
主引用文献A Complex Iron-Calcium Cofactor Catalyzing Phosphotransfer Chemistry
Science, 345, 2014
7ZEI
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Thermostable GH159 glycoside hydrolase from Caldicellulosiruptor at 1.7 A
分子名称: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL, CALCIUM ION, ...
著者Baudrexl, M, Fida, T, Berk, B, Schwarz, W, Zverlov, V.V, Groll, M, Liebl, W.
登録日2022-03-31
公開日2022-08-03
最終更新日2024-05-01
実験手法X-RAY DIFFRACTION (1.7 Å)
主引用文献Biochemical and Structural Characterization of Thermostable GH159 Glycoside Hydrolases Exhibiting alpha-L-Arabinofuranosidase Activity.
Front Mol Biosci, 9, 2022
2WDE
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Termus thermophilus Sulfate thiohydrolase SoxB in complex with thiosulfate
分子名称: MANGANESE (II) ION, SULFUR OXIDATION PROTEIN SOXB, TERTIARY-BUTYL ALCOHOL, ...
著者Sauve, V, Roversi, P, Leath, K.J, Garman, E.F, Antrobus, R, Lea, S.M, Berks, B.C.
登録日2009-03-24
公開日2009-06-16
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.85 Å)
主引用文献Mechanism for the Hydrolysis of a Sulfur-Sulfur Bond Based on the Crystal Structure of the Thiosulfohydrolase Soxb.
J.Biol.Chem., 284, 2009
2WDF
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BU of 2wdf by Molmil
Termus thermophilus Sulfate thiohydrolase SoxB
分子名称: MANGANESE (II) ION, SULFUR OXIDATION PROTEIN SOXB, TERTIARY-BUTYL ALCOHOL
著者Sauve, V, Roversi, P, Leath, K.J, Garman, E.F, Antrobus, R, Lea, S.M, Berks, B.C.
登録日2009-03-24
公開日2009-06-16
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.08 Å)
主引用文献Mechanism for the Hydrolysis of a Sulfur-Sulfur Bond Based on the Crystal Structure of the Thiosulfohydrolase Soxb.
J.Biol.Chem., 284, 2009
2WDC
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Termus thermophilus Sulfate thiohydrolase SoxB in complex with glycerol
分子名称: ACETATE ION, GLYCEROL, MANGANESE (II) ION, ...
著者Sauve, V, Roversi, P, Leath, K.J, Garman, E.F, Antrobus, R, Lea, S.M, Berks, B.C.
登録日2009-03-24
公開日2009-06-16
最終更新日2024-05-08
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Mechanism for the Hydrolysis of a Sulfur-Sulfur Bond Based on the Crystal Structure of the Thiosulfohydrolase Soxb.
J.Biol.Chem., 284, 2009
2WDD
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BU of 2wdd by Molmil
Termus thermophilus Sulfate thiohydrolase SoxB in complex with Sulfate
分子名称: ACETATE ION, MANGANESE (II) ION, SULFATE ION, ...
著者Sauve, V, Roversi, P, Leath, K.J, Garman, E.F, Antrobus, R, Lea, S.M, Berks, B.C.
登録日2009-03-24
公開日2009-06-16
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.5 Å)
主引用文献Mechanism for the Hydrolysis of a Sulfur-Sulfur Bond Based on the Crystal Structure of the Thiosulfohydrolase Soxb.
J.Biol.Chem., 284, 2009
2LZR
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TatA T22P
分子名称: Sec-independent protein translocase protein TatA
著者Rodriguez, F.M, Berks, B.C, Schnell, J.R.
登録日2012-10-08
公開日2013-03-20
最終更新日2023-06-14
実験手法SOLUTION NMR
主引用文献Structural model for the protein-translocating element of the twin-arginine transport system.
Proc.Natl.Acad.Sci.USA, 110, 2013
2UXV
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SufI Protein from Escherichia Coli
分子名称: PROTEIN SUFI
著者Tarry, M.J, Roversi, P, Sargent, F, Berks, B.C, Lea, S.M.
登録日2007-03-30
公開日2008-05-13
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (2.61 Å)
主引用文献The Escherichia Coli Cell Division Protein and Model Tat Substrate Sufi (Ftsp) Localizes to the Septal Ring and Has a Multicopper Oxidase-Like Structure.
J.Mol.Biol., 386, 2009
2UXT
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SufI Protein from Escherichia Coli
分子名称: PROTEIN SUFI
著者Tarry, M.J, Roversi, P, Sargent, F, Berks, B.C, Lea, S.M.
登録日2007-03-29
公開日2008-05-13
最終更新日2023-12-13
実験手法X-RAY DIFFRACTION (1.9 Å)
主引用文献The Escherichia Coli Cell Division Protein and Model Tat Substrate Sufi (Ftsp) Localizes to the Septal Ring and Has a Multicopper Oxidase-Like Structure.
J.Mol.Biol., 386, 2009
2LZS
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TatA oligomer
分子名称: Sec-independent protein translocase protein TatA
著者Rodriguez, F.M, Berks, B.C, Schnell, J.R.
登録日2012-10-08
公開日2013-03-20
最終更新日2013-04-24
実験手法SOLUTION NMR
主引用文献Structural model for the protein-translocating element of the twin-arginine transport system.
Proc.Natl.Acad.Sci.USA, 110, 2013
4B4A
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Structure of the TatC core of the twin arginine protein translocation system
分子名称: Lauryl Maltose Neopentyl Glycol, SEC-INDEPENDENT PROTEIN TRANSLOCASE PROTEIN TATC
著者Rollauer, S.E, Tarry, M.J, Jaaskelainen, M, Graham, J.E, Jaeger, F, Krehenbrink, M, Roversi, P, McDowell, M.A, Stansfeld, P.J, Johnson, S, Liu, S.M, Lukey, M.J, Marcoux, J, Robinson, C.V, Sansom, M.S, Palmer, T, Hogbom, M, Berks, B.C, Lea, S.M.
登録日2012-07-30
公開日2012-12-05
最終更新日2012-12-19
実験手法X-RAY DIFFRACTION (3.5 Å)
主引用文献Structure of the Tatc Core of the Twin-Arginine Protein Transport System.
Nature, 49, 2012
1H33
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Oxidised SoxAX complex from Rhodovulum sulfidophilum
分子名称: CYTOCHROME C, DIHEME CYTOCHROME C, HEME C
著者Bamford, V.A, Bruno, S, Rasmussen, T, Appia-Ayme, C, Cheesman, M.R, Berks, B.C, Hemmings, A.M.
登録日2002-08-21
公開日2002-11-07
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.75 Å)
主引用文献Structural Basis for the Oxidation of Thiosulfate by a Sulfur Cycle Enzyme
Embo J., 21, 2002
4A9X
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Pseudomonas fluorescens PhoX in complex with the substrate analogue AppCp
分子名称: 1,2-ETHANEDIOL, CALCIUM ION, MU-OXO-DIIRON, ...
著者Yong, S.C, Roversi, P, Lillington, J.E.D, Zeldin, O.B, Garman, E.F, Lea, S.M, Berks, B.C.
登録日2011-11-29
公開日2012-12-05
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.79 Å)
主引用文献A Complex Iron-Calcium Cofactor Catalyzing Phosphotransfer Chemistry
Science, 345, 2014
2OXH
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The SOXYZ Complex of Paracoccus Pantotrophus
分子名称: 1,2-ETHANEDIOL, SoxY protein, SoxZ protein
著者Sauve, V, Berks, B.C, Hemmings, A.M.
登録日2007-02-20
公開日2007-05-22
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献The SoxYZ Complex Carries Sulfur Cycle Intermediates on a Peptide Swinging Arm.
J.Biol.Chem., 282, 2007
2OZ1
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The SoxAX Complex of Rhodovulum Sulfidophilum
分子名称: Cytochrome c, Diheme cytochrome c, HEME C
著者Kihlken, M.A, Berks, B.C, Hemmings, A.M.
登録日2007-02-23
公開日2008-01-08
最終更新日2023-11-15
実験手法X-RAY DIFFRACTION (2.35 Å)
主引用文献The crystal structure of recombinant Rhodovulum sulfidophilum SoxAX confirms cysteine persulfide coordination to the catalytic heme
To be Published
4A9V
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Pseudomonas fluorescens PhoX
分子名称: 1,2-ETHANEDIOL, CALCIUM ION, CHLORIDE ION, ...
著者Yong, S.C, Roversi, P, Lillington, J.E.D, Zeldin, O.B, Garman, E.F, Lea, S.M, Berks, B.C.
登録日2011-11-28
公開日2012-12-05
最終更新日2023-12-20
実験手法X-RAY DIFFRACTION (1.1 Å)
主引用文献A Complex Iron-Calcium Cofactor Catalyzing Phosphotransfer Chemistry
Science, 345, 2014
1H31
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BU of 1h31 by Molmil
Oxidised SoxAX complex from Rhodovulum sulfidophilum
分子名称: CYTOCHROME C, DIHEME CYTOCHROME C, HEME C
著者Bamford, V.A, Bruno, S, Rasmussen, T, Appia-Ayme, C, Cheesman, M.R, Berks, B.C, Hemmings, A.M.
登録日2002-08-21
公開日2002-11-07
最終更新日2013-03-06
実験手法X-RAY DIFFRACTION (2.55 Å)
主引用文献Structural Basis for the Oxidation of Thiosulfate by a Sulfur Cycle Enzyme
Embo J., 21, 2002
2OXG
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The SoxYZ Complex of Paracoccus pantotrophus
分子名称: 1,2-ETHANEDIOL, SULFATE ION, SoxY protein, ...
著者Sauve, V, Berks, B.C, Hemmings, A.M.
登録日2007-02-20
公開日2007-05-22
最終更新日2023-08-30
実験手法X-RAY DIFFRACTION (1.4 Å)
主引用文献The SoxYZ Complex Carries Sulfur Cycle Intermediates on a Peptide Swinging Arm.
J.Biol.Chem., 282, 2007
2OX5
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The SoxYZ complex of Paracoccus pantotrophus
分子名称: 1,2-ETHANEDIOL, ACETATE ION, SULFATE ION, ...
著者Bruno, S, Sauve, V, Berks, B.C, Hemmings, A.M.
登録日2007-02-19
公開日2007-05-22
最終更新日2011-07-13
実験手法X-RAY DIFFRACTION (1.98 Å)
主引用文献The SoxYZ Complex Carries Sulfur Cycle Intermediates on a Peptide Swinging Arm.
J.Biol.Chem., 282, 2007

 

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