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PDB: 129 results

8RJ4
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E. coli adenylate kinase in complex with two ADP molecules and Mg2+ as a result of enzymatic AP4A hydrolysis
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Adenylate kinase, CHLORIDE ION, ...
Authors:Tischlik, S, Ronge, P, Wolf-Watz, M, Sauer-Eriksson, A.E.
Deposit date:2023-12-20
Release date:2024-07-10
Last modified:2024-08-28
Method:X-RAY DIFFRACTION (2.11 Å)
Cite:Magnesium induced structural reorganization in the active site of adenylate kinase.
Sci Adv, 10, 2024
8RJ9
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E. coli adenylate kinase Asp84Ala variant in complex with two ADP molecules as a result of enzymatic AP4A hydrolysis.
Descriptor: ADENOSINE-5'-DIPHOSPHATE, Adenylate kinase
Authors:Tischlik, S, Ronge, P, Wolf-Watz, M, Sauer-Eriksson, A.E.
Deposit date:2023-12-20
Release date:2024-07-10
Last modified:2024-08-28
Method:X-RAY DIFFRACTION (1.59 Å)
Cite:Magnesium induced structural reorganization in the active site of adenylate kinase.
Sci Adv, 10, 2024
6HCK
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BU of 6hck by Molmil
The Transcriptional Regulator PrfA from Listeria Monocytogenes in complex with dipeptide Leu-Leu
Descriptor: LEUCINE, Listeriolysin regulatory protein, SODIUM ION
Authors:Grundstrom, C, Oelker, M, Krypotou, E, Scortti, M, Luisi, B.F, Vazquez-Boland, J, Sauer-Eriksson, A.E.
Deposit date:2018-08-15
Release date:2019-02-13
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (2.7 Å)
Cite:Control of Bacterial Virulence through the Peptide Signature of the Habitat.
Cell Rep, 26, 2019
6EXM
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The Transcriptional Regulator PrfA from Listeria Monocytogenes in complex with a ring-fused 2-pyridone (MK202)
Descriptor: ISOPROPYL ALCOHOL, Listeriolysin positive regulatory factor A, SODIUM ION, ...
Authors:Grundstrom, C, Begum, A, Hall, M, Kulen, M, Lindgren, M, Johansson, J, Almqvist, F, Sauer, U.H, Sauer-Eriksson, A.E.
Deposit date:2017-11-08
Release date:2018-05-02
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Structure-Based Design of Inhibitors Targeting PrfA, the Master Virulence Regulator of Listeria monocytogenes.
J. Med. Chem., 61, 2018
6EUT
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The Transcriptional Regulator PrfA from Listeria Monocytogenes in complex with a ring-fused 2-pyridone (KSK67)
Descriptor: (3~{R})-8-cyclopropyl-7-[(4-methylnaphthalen-1-yl)methyl]-5-oxidanylidene-2,3-dihydro-[1,3]thiazolo[3,2-a]pyridine-3-carboxylic acid, GLYCEROL, ISOPROPYL ALCOHOL, ...
Authors:Begum, A, Hall, M, Grundstrom, C, Kulen, M, Lindgren, M, Johansson, J, Almqvist, F, Sauer, U.H, Sauer-Eriksson, A.E.
Deposit date:2017-10-31
Release date:2018-05-02
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure-Based Design of Inhibitors Targeting PrfA, the Master Virulence Regulator of Listeria monocytogenes.
J. Med. Chem., 61, 2018
6EUZ
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The Transcriptional Regulator PrfA from Listeria Monocytogenes in complex with a ring-fused 2-pyridone (MK37)
Descriptor: (3~{R})-8-methoxy-7-(naphthalen-1-ylmethyl)-5-oxidanylidene-2,3-dihydro-[1,3]thiazolo[3,2-a]pyridine-3-carboxylic acid, ISOPROPYL ALCOHOL, Listeriolysin positive regulatory factor A, ...
Authors:Begum, A, Hall, M, Grundstrom, C, Kulen, M, Lindgren, M, Johansson, J, Almqvist, F, Sauer, U.H, Sauer-Eriksson, A.E.
Deposit date:2017-10-31
Release date:2018-05-02
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.95 Å)
Cite:Structure-Based Design of Inhibitors Targeting PrfA, the Master Virulence Regulator of Listeria monocytogenes.
J. Med. Chem., 61, 2018
6EXL
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The Transcriptional Regulator PrfA from Listeria Monocytogenes in complex with a ring-fused 2-pyridone (MK206) - folded HTH motif
Descriptor: ISOPROPYL ALCOHOL, Listeriolysin positive regulatory factor A, SODIUM ION, ...
Authors:Hall, M, Grundstrom, C, Begum, A, Kulen, M, Lindgren, M, Johansson, J, Almqvist, F, Sauer, U.H, Sauer-Eriksson, A.E.
Deposit date:2017-11-08
Release date:2018-05-02
Last modified:2024-01-17
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structure-Based Design of Inhibitors Targeting PrfA, the Master Virulence Regulator of Listeria monocytogenes.
J. Med. Chem., 61, 2018
6ZJD
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BU of 6zjd by Molmil
Crystal structure of human adenylate kinase 3, AK3, in complex with inhibitor ATP
Descriptor: ADENOSINE-5'-TRIPHOSPHATE, CHLORIDE ION, GTP:AMP phosphotransferase AK3, ...
Authors:Grundstrom, C, Rogne, P, Wolf-Watz, M, Sauer-Eriksson, A.E.
Deposit date:2020-06-28
Release date:2020-09-16
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Structural Basis for GTP versus ATP Selectivity in the NMP Kinase AK3.
Biochemistry, 59, 2020
6ZJB
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Crystal structure of human adenylate kinase 3, AK3, in complex with inhibitor Gp5A
Descriptor: GTP:AMP phosphotransferase AK3, mitochondrial, MAGNESIUM ION, ...
Authors:Grundstrom, C, Rogne, P, Wolf-Watz, M, Sauer-Eriksson, A.E.
Deposit date:2020-06-28
Release date:2020-09-16
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.822 Å)
Cite:Structural Basis for GTP versus ATP Selectivity in the NMP Kinase AK3.
Biochemistry, 59, 2020
6ZJE
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BU of 6zje by Molmil
Crystal structure of human adenylate kinase 3, AK3, in complex with inhibitor Ap5A
Descriptor: BIS(ADENOSINE)-5'-PENTAPHOSPHATE, CHLORIDE ION, GTP:AMP phosphotransferase AK3, ...
Authors:Grundstrom, C, Rogne, P, Wolf-Watz, M, Sauer-Eriksson, A.E.
Deposit date:2020-06-28
Release date:2020-09-16
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.48 Å)
Cite:Structural Basis for GTP versus ATP Selectivity in the NMP Kinase AK3.
Biochemistry, 59, 2020
5HJG
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BU of 5hjg by Molmil
Crystal Structure of Human Transthyretin in Complex with Tetrabromobisphenol A (TBBPA)
Descriptor: 4,4'-propane-2,2-diylbis(2,6-dibromophenol), SODIUM ION, Transthyretin
Authors:Begum, A, Iakovleva, I, Brannstrom, K, Zhang, J, Andersson, P, Olofsson, A, Sauer-Eriksson, A.E.
Deposit date:2016-01-13
Release date:2016-05-04
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.4 Å)
Cite:Tetrabromobisphenol A Is an Efficient Stabilizer of the Transthyretin Tetramer.
Plos One, 11, 2016
5EJE
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BU of 5eje by Molmil
Crystal structure of E. coli Adenylate kinase G56C/T163C double mutant in complex with Ap5a
Descriptor: Adenylate kinase, BIS(ADENOSINE)-5'-PENTAPHOSPHATE, COBALT (II) ION
Authors:Sauer, U.H, Kovermann, M, Grundstrom, C, Wolf-Watz, M, Sauer-Eriksson, A.E.
Deposit date:2015-11-01
Release date:2016-11-09
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Structural basis for ligand binding to an enzyme by a conformational selection pathway.
Proc. Natl. Acad. Sci. U.S.A., 114, 2017
5EN3
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BU of 5en3 by Molmil
Crystal structure of human transthyretin in complex with luteolin-Cl at 1.25 A resolution
Descriptor: 2-[3,4-bis(oxidanyl)phenyl]-7-chloranyl-5-oxidanyl-chromen-4-one, GLYCEROL, SODIUM ION, ...
Authors:Begum, A, Nilsson, L, Olofsson, A, Sauer-Eriksson, A.E.
Deposit date:2015-11-09
Release date:2016-04-20
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.25 Å)
Cite:Modifications of the 7-Hydroxyl Group of the Transthyretin Ligand Luteolin Provide Mechanistic Insights into Its Binding Properties and High Plasma Specificity.
Plos One, 11, 2016
5IHH
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BU of 5ihh by Molmil
Crystal structure of human transthyretin in complex with luteolin-MeO at 1.35 A resolution
Descriptor: 2-(3,4-dihydroxyphenyl)-5-hydroxy-7-methoxy-4H-1-chromen-4-one, SODIUM ION, Transthyretin
Authors:Begum, A, Nilsson, L, Olofsson, A, Sauer-Eriksson, A.E.
Deposit date:2016-02-29
Release date:2016-04-20
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Modifications of the 7-Hydroxyl Group of the Transthyretin Ligand Luteolin Provide Mechanistic Insights into Its Binding Properties and High Plasma Specificity.
Plos One, 11, 2016
5F1R
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BU of 5f1r by Molmil
The Transcriptional Regulator PrfA from Listeria Monocytogenes in complex with a ring-fused 2-pyridone (C10)
Descriptor: (3~{R})-8-cyclopropyl-7-(naphthalen-1-ylmethyl)-5-oxidanylidene-2,3-dihydro-[1,3]thiazolo[3,2-a]pyridine-3-carboxylic acid, Listeriolysin regulatory protein
Authors:Begum, A, Grundstrom, C, Good, J.A.D, Andersson, C, ALmqvist, F, Johansson, J, Sauer, U.H, Sauer-Eriksson, A.E.
Deposit date:2015-11-30
Release date:2016-03-16
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Attenuating Listeria monocytogenes Virulence by Targeting the Regulatory Protein PrfA.
Cell Chem Biol, 23, 2016
6RZE
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BU of 6rze by Molmil
Crystal structure of E. coli Adenylate kinase R119A mutant
Descriptor: Adenylate kinase, CHLORIDE ION, SODIUM ION
Authors:Grundstrom, C, Rogne, P, Wolf-Watz, M, Sauer-Eriksson, A.E.
Deposit date:2019-06-13
Release date:2019-08-07
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.69 Å)
Cite:Nucleation of an Activating Conformational Change by a Cation-pi Interaction.
Biochemistry, 58, 2019
6S36
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BU of 6s36 by Molmil
Crystal structure of E. coli Adenylate kinase R119K mutant
Descriptor: Adenylate kinase, CHLORIDE ION, MAGNESIUM ION, ...
Authors:Grundstrom, C, Rogne, P, Wolf-Watz, M, Sauer-Eriksson, A.E.
Deposit date:2019-06-24
Release date:2019-08-07
Last modified:2024-01-24
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Nucleation of an Activating Conformational Change by a Cation-pi Interaction.
Biochemistry, 58, 2019
4QXV
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BU of 4qxv by Molmil
CRYSTAL STRUCTURE of HUMAN TRANSTHYRETIN IN COMPLEX WITH LUTEOLIN AT 1.1 A RESOLUTION
Descriptor: 2-(3,4-dihydroxyphenyl)-5,7-dihydroxy-4H-chromen-4-one, GLYCEROL, SODIUM ION, ...
Authors:Begum, A, Olofsson, A, Sauer-Eriksson, A.E.
Deposit date:2014-07-22
Release date:2015-06-03
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (1.12 Å)
Cite:The flavonoid luteolin, but not luteolin-7-o-glucoside, prevents a transthyretin mediated toxic response.
Plos One, 10, 2015
4QYA
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BU of 4qya by Molmil
Crystal structure of human transthyretin variant V30M in complex with luteolin
Descriptor: 2-(3,4-dihydroxyphenyl)-5,7-dihydroxy-4H-chromen-4-one, SODIUM ION, Transthyretin
Authors:Begum, A, Olofsson, A, Sauer-Eriksson, A.E.
Deposit date:2014-07-24
Release date:2015-06-03
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:The flavonoid luteolin, but not luteolin-7-o-glucoside, prevents a transthyretin mediated toxic response.
Plos One, 10, 2015
4X8H
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BU of 4x8h by Molmil
Crystal structure of E. coli Adenylate kinase P177A mutant
Descriptor: Adenylate kinase
Authors:Sauer-Eriksson, A.E, Kovermann, M, Aden, J, Grundstrom, C, Wolf-Watz, M, Sauer, U.H.
Deposit date:2014-12-10
Release date:2015-07-22
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.5 Å)
Cite:Structural basis for catalytically restrictive dynamics of a high-energy enzyme state.
Nat Commun, 6, 2015
4X8L
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BU of 4x8l by Molmil
Crystal structure of E. coli Adenylate kinase P177A mutant in complex with inhibitor Ap5a
Descriptor: Adenylate kinase, BIS(ADENOSINE)-5'-PENTAPHOSPHATE, MAGNESIUM ION, ...
Authors:Sauer-Eriksson, A.E, Kovermann, M, Aden, J, Grundstrom, C, Wolf-Watz, M, Sauer, U.H.
Deposit date:2014-12-10
Release date:2015-07-22
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Structural basis for catalytically restrictive dynamics of a high-energy enzyme state.
Nat Commun, 6, 2015
4X8O
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Crystal structure of E. coli Adenylate kinase Y171W mutant in complex with inhibitor Ap5a
Descriptor: Adenylate kinase, BIS(ADENOSINE)-5'-PENTAPHOSPHATE, MAGNESIUM ION, ...
Authors:Sauer-Eriksson, A.E, Kovermann, M, Aden, J, Grundstrom, C, Wolf-Watz, M, Sauer, U.H.
Deposit date:2014-12-10
Release date:2015-07-15
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.1 Å)
Cite:Structural basis for catalytically restrictive dynamics of a high-energy enzyme state.
Nat Commun, 6, 2015
4X8M
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BU of 4x8m by Molmil
Crystal structure of E. coli Adenylate kinase Y171W mutant
Descriptor: Adenylate kinase
Authors:Sauer-Eriksson, A.E, Kovermann, M, Aden, J, Grundstrom, C, Wolf-Watz, M, Sauer, U.H.
Deposit date:2014-12-10
Release date:2015-07-15
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structural basis for catalytically restrictive dynamics of a high-energy enzyme state.
Nat Commun, 6, 2015
4M8O
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BU of 4m8o by Molmil
TERNARY COMPLEX OF DNA POLYMERASE EPSILON WITH AN INCOMING dATP
Descriptor: 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE, 2-AMINOETHANESULFONIC ACID, CHLORIDE ION, ...
Authors:Sauer-Eriksson, A.E, Hogg, M, Osterman, P, Johansson, E.
Deposit date:2013-08-13
Release date:2013-11-27
Last modified:2023-09-20
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Structural basis for processive DNA synthesis by yeast DNA polymerase epsilon.
Nat.Struct.Mol.Biol., 21, 2014
4XCO
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BU of 4xco by Molmil
Signal-sequence induced conformational changes in the signal recognition particle
Descriptor: MAGNESIUM ION, RNA, SODIUM ION, ...
Authors:Hainzl, T, Sauer-Eriksson, A.E.
Deposit date:2014-12-18
Release date:2015-06-10
Last modified:2024-01-10
Method:X-RAY DIFFRACTION (2.9 Å)
Cite:Signal-sequence induced conformational changes in the signal recognition particle.
Nat Commun, 6, 2015

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数据于2024-11-06公开中

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