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PDB: 357 results

5HGE
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BU of 5hge by Molmil
Filamentous Assembly of Green Fluorescent Protein Supported by a C-terminal fusion of 18-residues, viewed in space group P212121
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, Green fluorescent protein
Authors:Sawaya, M.R, Heller, D.M, McPartland, L, Hochschild, A, Eisenberg, D.S.
Deposit date:2016-01-08
Release date:2017-01-11
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.863 Å)
Cite:Green Fluorescent Protein Fusion that Self Assembles as Polar Filaments
to be published
6N37
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BU of 6n37 by Molmil
SegA-sym, conformation of TDP-43 low complexity domain segment A sym
Descriptor: TAR DNA-binding protein 43
Authors:Cao, Q, Boyer, D.R, Sawaya, M.R, Eisenberg, D.S.
Deposit date:2018-11-14
Release date:2019-06-26
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Cryo-EM structures of four polymorphic TDP-43 amyloid cores.
Nat.Struct.Mol.Biol., 26, 2019
6N3C
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BU of 6n3c by Molmil
SegB, conformation of TDP-43 low complexity domain segment A
Descriptor: TAR DNA-binding protein 43
Authors:Cao, Q, Boyer, D.R, Sawaya, M.R, Eisenberg, D.S.
Deposit date:2018-11-14
Release date:2019-06-26
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (3.3 Å)
Cite:Cryo-EM structures of four polymorphic TDP-43 amyloid cores.
Nat.Struct.Mol.Biol., 26, 2019
5HW9
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BU of 5hw9 by Molmil
Filamentous Assembly of Green Fluorescent Protein Supported by a C-terminal fusion of 18-residues, viewed in space group P21
Descriptor: Green fluorescent protein
Authors:Sawaya, M.R, Heller, D.M, McPartland, L, Hochschild, A, Eisenberg, D.S.
Deposit date:2016-01-29
Release date:2017-02-01
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (3 Å)
Cite:Green Fluorescent Protein Fusion that Self Assembles as Polar Filaments
to be published
5HBD
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BU of 5hbd by Molmil
Filamentous Assembly of Green Fluorescent Protein Supported by a C-terminal fusion of 18-residues, viewed in space group C2
Descriptor: Green fluorescent protein
Authors:Sawaya, M.R, Hochschild, A, Heller, D.M, McPartland, L, Eisenberg, D.S.
Deposit date:2015-12-31
Release date:2017-01-04
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:Green Fluorescent Protein Fusion that Self Assembles as Polar Filaments
to be published
6N3B
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BU of 6n3b by Molmil
SegA-asym, conformation of TDP-43 low complexity domain segment A asym
Descriptor: TAR DNA-binding protein 43
Authors:Cao, Q, Boyer, D.R, Sawaya, M.R, Eisenberg, D.S.
Deposit date:2018-11-14
Release date:2019-06-26
Last modified:2024-03-20
Method:ELECTRON MICROSCOPY (3.8 Å)
Cite:Cryo-EM structures of four polymorphic TDP-43 amyloid cores.
Nat.Struct.Mol.Biol., 26, 2019
1HTO
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BU of 1hto by Molmil
CRYSTALLOGRAPHIC STRUCTURE OF A RELAXED GLUTAMINE SYNTHETASE FROM MYCOBACTERIUM TUBERCULOSIS
Descriptor: ADENOSINE MONOPHOSPHATE, CITRIC ACID, GLUTAMINE SYNTHETASE, ...
Authors:Gill, H.S, Eisenberg, D, TB Structural Genomics Consortium (TBSGC)
Deposit date:2001-01-01
Release date:2002-07-24
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Multicopy crystallographic refinement of a relaxed glutamine synthetase from Mycobacterium tuberculosis highlights flexible loops in the enzymatic mechanism and its regulation.
Biochemistry, 41, 2002
3LOZ
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BU of 3loz by Molmil
Crystal structure of Beta 2 Microglobulin amyloidogenic segment LSFSKD
Descriptor: Beta-2-microglobulin segment LSFSKD
Authors:Liu, C, Sawaya, M, Eisenberg, D.
Deposit date:2010-02-04
Release date:2010-12-08
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Beta2-microglobulin forms three-dimensional domain-swapped amyloid fibrils with disulfide linkages.
Nat.Struct.Mol.Biol., 18, 2011
4M5T
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BU of 4m5t by Molmil
Disulfide trapped human alphaB crystallin core domain in complex with C-terminal peptide
Descriptor: Alpha-crystallin B chain, SULFATE ION
Authors:Laganowsky, A, Cascio, D, Hochberg, G, Sawaya, M.R, Benesch, J.L.P, Robinson, C.V, Eisenberg, D.
Deposit date:2013-08-08
Release date:2014-04-09
Last modified:2019-07-17
Method:X-RAY DIFFRACTION (2 Å)
Cite:The structured core domain of alpha B-crystallin can prevent amyloid fibrillation and associated toxicity.
Proc.Natl.Acad.Sci.USA, 111, 2014
2APQ
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BU of 2apq by Molmil
Crystal Structure of an Active Site Mutant of Bovine Pancreatic Ribonuclease A (H119A-RNase A) with a 10-Glutamine expansion in the C-terminal hinge-loop.
Descriptor: PHOSPHATE ION, Ribonuclease
Authors:Sambashivan, S, Liu, Y, Sawaya, M.R, Gingery, M, Eisenberg, D.
Deposit date:2005-08-16
Release date:2005-09-13
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Amyloid-like fibrils of ribonuclease A with three-dimensional domain-swapped and native-like structure.
Nature, 437, 2005
3DMK
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BU of 3dmk by Molmil
Crystal structure of Down Syndrome Cell Adhesion Molecule (DSCAM) isoform 1.30.30, N-terminal eight Ig domains
Descriptor: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose, Down Syndrome Cell Adhesion Molecule (DSCAM) isoform 1.30.30, ...
Authors:Sawaya, M.R, Wojtowicz, W.M, Eisenberg, D, Zipursky, S.L.
Deposit date:2008-07-01
Release date:2008-10-07
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (4.19 Å)
Cite:A double S shape provides the structural basis for the extraordinary binding specificity of Dscam isoforms.
Cell(Cambridge,Mass.), 134, 2008
1U5H
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BU of 1u5h by Molmil
Structure of Citrate Lyase beta subunit from Mycobacterium tuberculosis
Descriptor: FORMIC ACID, citE
Authors:Goulding, C.W, Lekin, T, Kim, C.Y, Segelke, B, Terwilliger, T.C, Eisenberg, D, TB Structural Genomics Consortium (TBSGC)
Deposit date:2004-07-27
Release date:2004-10-12
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.65 Å)
Cite:The structure and computational analysis of Mycobacterium tuberculosis protein CitE suggest a novel enzymatic function.
J.Mol.Biol., 365, 2007
4M5S
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BU of 4m5s by Molmil
Human alphaB crystallin core domain in complex with C-terminal peptide
Descriptor: Alpha-crystallin B chain, SUCCINIC ACID
Authors:Laganowsky, A, Cascio, D, Sawaya, M.R, Eisenberg, D.
Deposit date:2013-08-08
Release date:2014-04-09
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.37 Å)
Cite:The structured core domain of alpha B-crystallin can prevent amyloid fibrillation and associated toxicity.
Proc.Natl.Acad.Sci.USA, 111, 2014
5E5X
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BU of 5e5x by Molmil
Structure of the amyloid forming peptide ANFLVH (residues 13-18) from islet amyloid polypeptide
Descriptor: ANFLVH (residues 13-18) from islet amyloid polypeptide
Authors:Soriaga, A.B, Eisenberg, D.
Deposit date:2015-10-09
Release date:2015-12-16
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.61 Å)
Cite:Crystal Structures of IAPP Amyloidogenic Segments Reveal a Novel Packing Motif of Out-of-Register Beta Sheets.
J.Phys.Chem.B, 120, 2016
5E5Z
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BU of 5e5z by Molmil
Structure of the amyloid forming peptide LVHSSN (residues
Descriptor: LVHSSN (residues 16-21) from islet amyloid polypeptide
Authors:Soriaga, A.B, Eisenberg, D.
Deposit date:2015-10-09
Release date:2015-12-16
Last modified:2024-03-06
Method:X-RAY DIFFRACTION (1.664 Å)
Cite:Crystal Structures of IAPP Amyloidogenic Segments Reveal a Novel Packing Motif of Out-of-Register Beta Sheets.
J.Phys.Chem.B, 120, 2016
4MJH
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BU of 4mjh by Molmil
Human Hsp27 core domain in complex with C-terminal peptide
Descriptor: Heat shock protein beta-1
Authors:Laganowsky, A, Cascio, D, Sawaya, M.R, Eisenberg, D.
Deposit date:2013-09-03
Release date:2014-04-09
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.599 Å)
Cite:The structured core domain of alpha B-crystallin can prevent amyloid fibrillation and associated toxicity.
Proc.Natl.Acad.Sci.USA, 111, 2014
1G6U
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BU of 1g6u by Molmil
CRYSTAL STRUCTURE OF A DOMAIN SWAPPED DIMER
Descriptor: DOMAIN SWAPPED DIMER, SULFATE ION, trifluoroacetic acid
Authors:Ogihara, N.L, Ghirlanda, G, Bryson, J.W, Gingery, M, DeGrado, W.F, Eisenberg, D.
Deposit date:2000-11-07
Release date:2001-02-21
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.48 Å)
Cite:Design of three-dimensional domain-swapped dimers and fibrous oligomers.
Proc.Natl.Acad.Sci.USA, 98, 2001
4ONK
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BU of 4onk by Molmil
[Leu-5]-Enkephalin mutant - YVVFL
Descriptor: [Leu-5]-Enkephalin mutant - YVVFL
Authors:Sangwan, S, Eisenberg, D, Sawaya, M.R, Do, T.D, Bowers, M.T, Lapointe, N.E, Teplow, D.B, Feinstein, S.C.
Deposit date:2014-01-28
Release date:2014-07-02
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Factors that drive Peptide assembly from native to amyloid structures: experimental and theoretical analysis of [leu-5]-enkephalin mutants.
J.Phys.Chem.B, 118, 2014
4OLR
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BU of 4olr by Molmil
[Leu-5]-Enkephalin mutant - YVVFV
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, [Leu-5]-Enkephalin mutant - YVVFV
Authors:Sangwan, S, Eisenberg, D, Sawaya, M.R, Do, T.D, Bowers, M.T, Lapointe, N.E, Teplow, D.B, Feinstein, S.C.
Deposit date:2014-01-24
Release date:2014-07-02
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.1 Å)
Cite:Factors that drive Peptide assembly from native to amyloid structures: experimental and theoretical analysis of [leu-5]-enkephalin mutants.
J.Phys.Chem.B, 118, 2014
3LOW
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BU of 3low by Molmil
Crystal structure of Beta 2 Microglobulin domain-swapped dimer
Descriptor: Beta-2-microglobulin, GLYCEROL
Authors:Liu, C, Eisenberg, D.
Deposit date:2010-02-04
Release date:2010-12-08
Last modified:2019-07-17
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Beta2-microglobulin forms three-dimensional domain-swapped amyloid fibrils with disulfide linkages.
Nat.Struct.Mol.Biol., 18, 2011
1YJO
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BU of 1yjo by Molmil
Structure of NNQQNY from yeast prion Sup35 with zinc acetate
Descriptor: ACETIC ACID, Eukaryotic peptide chain release factor GTP-binding subunit, ZINC ION
Authors:Nelson, R, Sawaya, M.R, Balbirnie, M, Madsen, A.O, Riekel, C, Grothe, R, Eisenberg, D.
Deposit date:2005-01-15
Release date:2005-06-14
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.3 Å)
Cite:Structure of the cross-beta spine of amyloid-like fibrils.
Nature, 435, 2005
1YJP
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BU of 1yjp by Molmil
Structure of GNNQQNY from yeast prion Sup35
Descriptor: Eukaryotic peptide chain release factor GTP-binding subunit
Authors:Nelson, R, Sawaya, M.R, Balbirnie, M, Madsen, A.O, Riekel, C, Grothe, R, Eisenberg, D.
Deposit date:2005-01-15
Release date:2005-06-14
Last modified:2024-02-14
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structure of the cross-beta spine of amyloid-like fibrils.
Nature, 435, 2005
1YKW
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BU of 1ykw by Molmil
Crystal Structure of a Novel RuBisCO-Like Protein from the Green Sulfur Bacterium Chlorobium tepidum
Descriptor: RuBisCO-like protein
Authors:Li, H, Sawaya, M.R, Tabita, F.R, Eisenberg, D.
Deposit date:2005-01-18
Release date:2005-05-17
Last modified:2023-08-23
Method:X-RAY DIFFRACTION (2 Å)
Cite:Crystal structure of a RuBisCO-like protein from the green sulfur bacterium Chlorobium tepidum.
Structure, 13, 2005
3G7W
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BU of 3g7w by Molmil
Islet Amyloid Polypeptide (IAPP or Amylin) Residues 1 to 22 fused to Maltose Binding Protein
Descriptor: GLYCEROL, Maltose-binding periplasmic protein, Islet amyloid polypeptide fusion protein, ...
Authors:Wiltzius, J.J.W, Sawaya, M.R, Eisenberg, D.
Deposit date:2009-02-11
Release date:2009-06-23
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Atomic structures of IAPP (amylin) fusions suggest a mechanism for fibrillation and the role of insulin in the process
Protein Sci., 18, 2009
1Z6K
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BU of 1z6k by Molmil
Citrate lyase beta subunit complexed with oxaloacetate and magnesium from M. tuberculosis
Descriptor: Citrate Lyase beta subunit, MAGNESIUM ION, OXALOACETATE ION
Authors:Goulding, C.W, Bowers, P.M, Segelke, B, Lekin, T, Kim, C.Y, Terwilliger, T.C, Eisenberg, D, TB Structural Genomics Consortium (TBSGC)
Deposit date:2005-03-22
Release date:2005-05-03
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:The structure and computational analysis of Mycobacterium tuberculosis protein CitE suggest a novel enzymatic function.
J.Mol.Biol., 365, 2007

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數據於2024-05-29公開中

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