Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help
PDB: 357 results

3NI3
DownloadVisualize
BU of 3ni3 by Molmil
54-Membered ring macrocyclic beta-sheet peptide
Descriptor: 54-membered ring macrocyclic beta-sheet peptide, ISOPROPYL ALCOHOL
Authors:Sawaya, M.R, Eisenberg, D, Nowick, J.S, Korman, T.P, Khakshoor, O.
Deposit date:2010-06-15
Release date:2010-09-15
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.34 Å)
Cite:X-ray crystallographic structure of an artificial beta-sheet dimer.
J.Am.Chem.Soc., 132, 2010
4R0P
DownloadVisualize
BU of 4r0p by Molmil
Ifqins, an amyloid forming segment from human lysozyme spanning residues 56-61
Descriptor: Lysozyme C
Authors:Sievers, S, Eisenberg, D.S, Sawaya, M.R.
Deposit date:2014-08-01
Release date:2014-12-17
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.52 Å)
Cite:Structure-based design of functional amyloid materials.
J.Am.Chem.Soc., 136, 2014
3NVH
DownloadVisualize
BU of 3nvh by Molmil
MIHFGND segment 137-143 from mouse prion
Descriptor: Major prion protein, trifluoroacetic acid
Authors:Apostol, M.I, Sawaya, M.R, Eisenberg, D.
Deposit date:2010-07-08
Release date:2011-03-02
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.61 Å)
Cite:Atomic structures suggest determinants of transmission barriers in Mammalian prion disease.
Biochemistry, 50, 2011
3OVJ
DownloadVisualize
BU of 3ovj by Molmil
Structure of an amyloid forming peptide KLVFFA from amyloid beta in complex with orange G
Descriptor: 7-hydroxy-8-[(E)-phenyldiazenyl]naphthalene-1,3-disulfonic acid, KLVFFA hexapeptide segment from Amyloid beta
Authors:Landau, M, Eisenberg, D.
Deposit date:2010-09-16
Release date:2011-07-06
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Towards a pharmacophore for amyloid.
Plos Biol., 9, 2011
3Q9H
DownloadVisualize
BU of 3q9h by Molmil
LVFFA segment from Alzheimer's Amyloid-Beta displayed on 42-membered macrocycle scaffold
Descriptor: 1,4-BUTANEDIOL, Cyclic pseudo-peptide LVFFA(ORN)(HAO)LK(ORN), GLYCEROL, ...
Authors:Liu, C, Sawaya, M.R, Eisenberg, D, Nowick, J.S, Cheng, P, Zheng, J.
Deposit date:2011-01-07
Release date:2011-06-08
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.25 Å)
Cite:Characteristics of Amyloid-Related Oligomers Revealed by Crystal Structures of Macrocyclic beta-Sheet Mimics.
J.Am.Chem.Soc., 133, 2011
3N3E
DownloadVisualize
BU of 3n3e by Molmil
Zebrafish AlphaA crystallin
Descriptor: Alpha A crystallin
Authors:Laganowsky, A, Eisenberg, D.
Deposit date:2010-05-19
Release date:2010-08-11
Last modified:2023-09-06
Method:X-RAY DIFFRACTION (1.75 Å)
Cite:Non-3D domain swapped crystal structure of truncated zebrafish alphaA crystallin.
Protein Sci., 19, 2010
3Q9I
DownloadVisualize
BU of 3q9i by Molmil
LVFFA segment from Alzheimer's Amyloid-Beta displayed on 42-membered macrocycle scaffold, bromide derivative
Descriptor: CHLORIDE ION, Cyclic pseudo-peptide LV(4BF)FA(ORN)(HAO)LK(ORN), GLYCEROL, ...
Authors:Liu, C, Sawaya, M.R, Eisenberg, D, Nowick, J.S, Cheng, P, Zheng, J.
Deposit date:2011-01-07
Release date:2011-06-08
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.99 Å)
Cite:Characteristics of Amyloid-Related Oligomers Revealed by Crystal Structures of Macrocyclic beta-Sheet Mimics.
J.Am.Chem.Soc., 133, 2011
1EWF
DownloadVisualize
BU of 1ewf by Molmil
THE 1.7 ANGSTROM CRYSTAL STRUCTURE OF BPI
Descriptor: 1,2-DIACYL-SN-GLYCERO-3-PHOSPHOCHOLINE, BACTERICIDAL/PERMEABILITY-INCREASING PROTEIN
Authors:Kleiger, G, Beamer, L.J, Grothe, R, Mallick, P, Eisenberg, D.
Deposit date:2000-04-25
Release date:2000-06-21
Last modified:2021-11-03
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:The 1.7 A crystal structure of BPI: a study of how two dissimilar amino acid sequences can adopt the same fold.
J.Mol.Biol., 299, 2000
3LOW
DownloadVisualize
BU of 3low by Molmil
Crystal structure of Beta 2 Microglobulin domain-swapped dimer
Descriptor: Beta-2-microglobulin, GLYCEROL
Authors:Liu, C, Eisenberg, D.
Deposit date:2010-02-04
Release date:2010-12-08
Last modified:2019-07-17
Method:X-RAY DIFFRACTION (2.3 Å)
Cite:Beta2-microglobulin forms three-dimensional domain-swapped amyloid fibrils with disulfide linkages.
Nat.Struct.Mol.Biol., 18, 2011
3Q9J
DownloadVisualize
BU of 3q9j by Molmil
AIIFL segment derived from Alzheimer's Amyloid-Beta displayed on 42-membered macrocycle scaffold
Descriptor: CHLORIDE ION, Cyclic pseudo-peptide AIIFL(ORN)(HAO)YK(ORN), GLYCEROL, ...
Authors:Liu, C, Sawaya, M.R, Eisenberg, D, Nowick, J.S, Cheng, P, Zheng, J.
Deposit date:2011-01-07
Release date:2011-06-08
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (2.55 Å)
Cite:Characteristics of Amyloid-Related Oligomers Revealed by Crystal Structures of Macrocyclic beta-Sheet Mimics.
J.Am.Chem.Soc., 133, 2011
3SGS
DownloadVisualize
BU of 3sgs by Molmil
Amyloid-related segment of alphaB-crystallin residues 95-100
Descriptor: Alpha-crystallin B chain
Authors:Laganowsky, A, Sawaya, M.R, Cascio, D, Eisenberg, D.
Deposit date:2011-06-15
Release date:2012-03-21
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (1.703 Å)
Cite:Atomic view of a toxic amyloid small oligomer.
Science, 335, 2012
2ONX
DownloadVisualize
BU of 2onx by Molmil
NNQQ peptide corresponding to residues 8-11 of yeast prion sup35 (alternate crystal form)
Descriptor: peptide corresponding to residues 8-11 of yeast prion sup35
Authors:Sawaya, M.R, Sambashivan, S, Nelson, R, Ivanova, M, Sievers, S.A, Apostol, M.I, Thompson, M.J, Balbirnie, M, Wiltzius, J.J, McFarlane, H, Madsen, A.O, Riekel, C, Eisenberg, D.
Deposit date:2007-01-24
Release date:2007-02-06
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (1.52 Å)
Cite:Atomic structures of amyloid cross-beta spines reveal varied steric zippers.
Nature, 447, 2007
2OKZ
DownloadVisualize
BU of 2okz by Molmil
MVGGVV peptide derived from Alzheimer's A-beta
Descriptor: peptide from Alzheimer's A-beta
Authors:Sawaya, M.R, Sambashivan, S, Eisenberg, D.
Deposit date:2007-01-18
Release date:2007-01-30
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Atomic structures of amyloid cross-beta spines reveal varied steric zippers.
Nature, 447, 2007
2OMM
DownloadVisualize
BU of 2omm by Molmil
GNNQQNY peptide corresponding to residues 7-13 of yeast prion sup35
Descriptor: GNNQQNY peptide corresponding to residues 7-13 of yeast prion sup35
Authors:Sawaya, M.R, Nelson, R, Eisenberg, D.
Deposit date:2007-01-22
Release date:2007-01-30
Last modified:2023-08-30
Method:X-RAY DIFFRACTION (2 Å)
Cite:Atomic structures of amyloid cross-beta spines reveal varied steric zippers.
Nature, 447, 2007
2OL9
DownloadVisualize
BU of 2ol9 by Molmil
Peptide corresponding to residues 170-175 of human prion
Descriptor: peptide from human prion
Authors:Apostol, M.A, Sawaya, M.R, Eisenberg, D.
Deposit date:2007-01-18
Release date:2007-01-30
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (0.85 Å)
Cite:Atomic structures of amyloid cross-beta spines reveal varied steric zippers.
Nature, 447, 2007
3SGO
DownloadVisualize
BU of 3sgo by Molmil
Amyloid-related segment of alphaB-crystallin residues 90-100
Descriptor: Alpha-crystallin B chain
Authors:Laganowsky, A, Sawaya, M.R, Cascio, D, Eisenberg, D.
Deposit date:2011-06-15
Release date:2012-03-21
Last modified:2024-02-28
Method:X-RAY DIFFRACTION (2.557 Å)
Cite:Atomic view of a toxic amyloid small oligomer.
Science, 335, 2012
2OLX
DownloadVisualize
BU of 2olx by Molmil
Structure of NNQQ Peptide from Yeast Prion SUP35
Descriptor: NNQQ peptide derived from Yeast Prion Sup35
Authors:Nelson, R, Sawaya, M.R, Eisenberg, D.
Deposit date:2007-01-19
Release date:2007-01-30
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.42 Å)
Cite:Atomic structures of amyloid cross-beta spines reveal varied steric zippers.
Nature, 447, 2007
2ONV
DownloadVisualize
BU of 2onv by Molmil
Crystal Structure of the amyloid-fibril forming peptide GGVVIA derived from the Alzheimer's amyloid Abeta (Abeta37-42).
Descriptor: amyloid-fibril forming peptide GGVVIA derived from the Alzheimer's amyloid Abeta
Authors:Sambashivan, S, Sawaya, M.R, Eisenberg, D.
Deposit date:2007-01-24
Release date:2007-02-06
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.61 Å)
Cite:Atomic structures of amyloid cross-beta spines reveal varied steric zippers.
Nature, 447, 2007
2ONW
DownloadVisualize
BU of 2onw by Molmil
Structure of SSTSSA, a fibril forming peptide from Bovine Pancreatic Ribonuclease (RNase A, residues 15-20)
Descriptor: fibril forming peptide from Bovine Pancreatic Ribonuclease (RNase A)
Authors:Sambashivan, S, Sawaya, M.R, Eisenberg, D.
Deposit date:2007-01-24
Release date:2007-02-06
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (1.51 Å)
Cite:Atomic structures of amyloid cross-beta spines reveal varied steric zippers.
Nature, 447, 2007
3OVL
DownloadVisualize
BU of 3ovl by Molmil
Structure of an amyloid forming peptide VQIVYK from the TAU protein in complex with orange G
Descriptor: 7-hydroxy-8-[(E)-phenyldiazenyl]naphthalene-1,3-disulfonic acid, ACETIC ACID, Microtubule-associated protein, ...
Authors:Landau, M, Eisenberg, D.
Deposit date:2010-09-16
Release date:2011-07-06
Last modified:2024-02-21
Method:X-RAY DIFFRACTION (1.81 Å)
Cite:Towards a pharmacophore for amyloid.
Plos Biol., 9, 2011
1JRK
DownloadVisualize
BU of 1jrk by Molmil
Crystal Structure of a Nudix Protein from Pyrobaculum aerophilum Reveals a Dimer with Intertwined Beta Sheets
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, Nudix homolog
Authors:Wang, S, Mura, C, Sawaya, M.R, Cascio, D, Eisenberg, D.
Deposit date:2001-08-13
Release date:2002-04-03
Last modified:2024-04-03
Method:X-RAY DIFFRACTION (2.4 Å)
Cite:Structure of a Nudix protein from Pyrobaculum aerophilum reveals a dimer with two intersubunit beta-sheets.
Acta Crystallogr.,Sect.D, 58, 2002
1K26
DownloadVisualize
BU of 1k26 by Molmil
Structure of a Nudix Protein from Pyrobaculum aerophilum Solved by the Single Wavelength Anomolous Scattering Method
Descriptor: ACETIC ACID, GLYCEROL, IRIDIUM (III) ION, ...
Authors:Wang, S, Mura, C, Sawaya, M.R, Cascio, D, Eisenberg, D.
Deposit date:2001-09-26
Release date:2002-04-03
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.85 Å)
Cite:Structure of a Nudix protein from Pyrobaculum aerophilum reveals a dimer with two intersubunit beta-sheets.
Acta Crystallogr.,Sect.D, 58, 2002
1K2E
DownloadVisualize
BU of 1k2e by Molmil
crystal structure of a nudix protein from Pyrobaculum aerophilum
Descriptor: ACETIC ACID, GLYCEROL, NICKEL (II) ION, ...
Authors:Wang, S, Mura, C, Sawaya, M.R, Cascio, D, Eisenberg, D.
Deposit date:2001-09-26
Release date:2002-04-03
Last modified:2023-08-16
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:Structure of a Nudix protein from Pyrobaculum aerophilum reveals a dimer with two intersubunit beta-sheets.
Acta Crystallogr.,Sect.D, 58, 2002
3T4G
DownloadVisualize
BU of 3t4g by Molmil
AIIGLMV segment from Alzheimer's Amyloid-Beta displayed on 54-membered macrocycle scaffold
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, Cyclic pseudo-peptide (ORN)AIIGLMV(ORN)KF(HAO)(4BF)K
Authors:Zhao, M, Liu, C, Cheng, P.N, Eisenberg, D, Nowick, J.S.
Deposit date:2011-07-26
Release date:2012-10-31
Last modified:2023-11-15
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:Amyloid beta-sheet mimics that antagonize protein aggregation and reduce amyloid toxicity.
Nat Chem, 4, 2012
1F0P
DownloadVisualize
BU of 1f0p by Molmil
MYCOBACTERIUM TUBERCULOSIS ANTIGEN 85B WITH TREHALOSE
Descriptor: (4S)-2-METHYL-2,4-PENTANEDIOL, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, ANTIGEN 85-B, ...
Authors:Anderson, D.H, Harth, G, Horwitz, M.A, Eisenberg, D, TB Structural Genomics Consortium (TBSGC)
Deposit date:2000-05-16
Release date:2001-01-24
Last modified:2023-08-09
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:An interfacial mechanism and a class of inhibitors inferred from two crystal structures of the Mycobacterium tuberculosis 30 kDa major secretory protein (Antigen 85B), a mycolyl transferase.
J.Mol.Biol., 307, 2001

221051

數據於2024-06-12公開中

PDB statisticsPDBj update infoContact PDBjnumon