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PDB: 1542 results

4ASV
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BU of 4asv by Molmil
Solution structure of the N-terminal dimerisation domain of Sgt2
Descriptor: SMALL GLUTAMINE-RICH TETRATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 2
Authors:Simon, A.C, Simpson, P.J, Goldstone, R.M, Krysztofinska, E.M, Murray, J.W, High, S, Isaacson, R.L.
Deposit date:2012-05-03
Release date:2013-01-16
Last modified:2024-06-19
Method:SOLUTION NMR
Cite:Structure of the Sgt2/Get5 Complex Provides Insights Into Get-Mediated Targeting of Tail-Anchored Membrane Proteins
Proc.Natl.Acad.Sci.USA, 110, 2013
9FT0
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BU of 9ft0 by Molmil
Yeast 20S proteasome in complex with epoxyketone inhibitor 42
Descriptor: (2S)-N-[(2S)-1-[[(1S)-2-cyclohexyl-1-[(2R,3S,6R,7S)-3-methanoyl-2,6-dimethyl-6,7-bis(oxidanyl)-1,4-oxazepan-7-yl]ethyl]amino]-3-(4-methoxyphenyl)-1-oxidanylidene-propan-2-yl]-2-(2-morpholin-4-ylethanoylamino)-4-oxidanyl-butanamide, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CHLORIDE ION, ...
Authors:Maurits, E, Huber, E.M, Dekker, P.M, Wang, X, Heinemeyer, W, Florea, B.I, Groll, M, Overkleeft, H.S.
Deposit date:2024-06-23
Release date:2024-07-10
Last modified:2024-07-17
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:Structure-based design of peptide epoxyketones selectively targeting the three human immunoproteasome active sites
to be published
9GLE
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BU of 9gle by Molmil
Jumonji domain-containing protein 2A with crystallization epitope mutations A91T:T93S
Descriptor: 1,2-ETHANEDIOL, Lysine-specific demethylase 4A, NICKEL (II) ION, ...
Authors:Fairhead, M, Strain-Damerell, C, Ye, M, Mackinnon, S.R, Pinkas, D, MacLean, E.M, Koekemoer, L, Damerell, D, Krojer, T, Arrowsmith, C.H, Edwards, A, Bountra, C, Yue, W, Burgess-Brown, N, Marsden, B, von Delft, F, Structural Genomics Consortium (SGC)
Deposit date:2024-08-27
Release date:2024-09-18
Method:X-RAY DIFFRACTION (1.88 Å)
Cite:A fast, parallel method for efficiently exploring crystallization behaviour of large numbers of protein variants
To be published
9GH3
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BU of 9gh3 by Molmil
pleckstrin homology domain interacting protein with crystallization epitope mutations L1408N:R1409E
Descriptor: 1,2-ETHANEDIOL, PH-interacting protein
Authors:Fairhead, M, Strain-Damerell, C, Ye, M, Mackinnon, S.R, Pinkas, D, MacLean, E.M, Koekemoer, L, Damerell, D, Krojer, T, Arrowsmith, C.H, Edwards, A, Yue, W, Burgess-Brown, N, Marsden, B, von Delft, F, Structural Genomics Consortium (SGC)
Deposit date:2024-08-14
Release date:2024-08-21
Method:X-RAY DIFFRACTION (1.19 Å)
Cite:A fast, parallel method for efficiently exploring crystallization behaviour of large numbers of protein variants
To Be Published
8W2J
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BU of 8w2j by Molmil
Human liver phosphofructokinase-1 filament in the T-state conformation
Descriptor: 1,6-di-O-phosphono-beta-D-fructofuranose, ADENOSINE-5'-TRIPHOSPHATE, ATP-dependent 6-phosphofructokinase, ...
Authors:Lynch, E.M, Kollman, J.M, Webb, B.A.
Deposit date:2024-02-20
Release date:2024-09-11
Last modified:2024-09-25
Method:ELECTRON MICROSCOPY (3.1 Å)
Cite:Structural basis for allosteric regulation of human phosphofructokinase-1.
Nat Commun, 15, 2024
9GDK
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BU of 9gdk by Molmil
Jumonji domain-containing protein 1C with crystallization epitope mutations L2440Y:G2444H
Descriptor: Probable JmjC domain-containing histone demethylation protein 2C
Authors:Fairhead, M, Strain-Damerell, C, Ye, M, Mackinnon, S.R, Pinkas, D, MacLean, E.M, Koekemoer, L, Damerell, D, Krojer, T, Arrowsmith, C.H, Edwards, A, Bountra, C, Yue, W, Burgess-Brown, N, Marsden, B, von Delft, F, Structural Genomics Consortium (SGC)
Deposit date:2024-08-05
Release date:2024-08-21
Method:X-RAY DIFFRACTION (1.78 Å)
Cite:A fast, parallel method for efficiently exploring crystallization behaviour of large numbers of protein variants
To Be Published
9FSB
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BU of 9fsb by Molmil
Coxsackievirus B3 3C protease in P121 spacegroup
Descriptor: Genome polyprotein
Authors:Fairhead, M, Lithgo, R.M, MacLean, E.M, Bowesman-Jones, H, Aschenbrenner, J.C, Balcomb, B.H, Capkin, E, Chandran, A.V, Godoy, A.S, Marples, P.G, Fearon, D, von Delft, F, Koekemoer, L.
Deposit date:2024-06-20
Release date:2024-08-14
Method:X-RAY DIFFRACTION (1.592 Å)
Cite:Coxsackievirus B3 3C protease in P121 spacegroup
To Be Published
9FSV
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BU of 9fsv by Molmil
Yeast 20S proteasome with human beta2i (1-53) in complex with epoxyketone inhibitor 42
Descriptor: (2S)-N-[(2S)-1-[[(1S)-2-cyclohexyl-1-[(2R,3S,6R,7S)-3-methanoyl-2,6-dimethyl-6,7-bis(oxidanyl)-1,4-oxazepan-7-yl]ethyl]amino]-3-(4-methoxyphenyl)-1-oxidanylidene-propan-2-yl]-2-(2-morpholin-4-ylethanoylamino)-4-oxidanyl-butanamide, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CHLORIDE ION, ...
Authors:Maurits, E, Huber, E.M, Dekker, P.M, Wang, X, Heinemeyer, W, Florea, B.I, Groll, M, Overkleeft, H.S.
Deposit date:2024-06-22
Release date:2024-07-17
Last modified:2024-10-09
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:Structure-based design of peptide epoxyketones selectively targeting the three human immunoproteasome active sites
to be published
8W2G
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BU of 8w2g by Molmil
Human liver phosphofructokinase-1 in the R-state conformation
Descriptor: 1,6-di-O-phosphono-beta-D-fructofuranose, 6-O-phosphono-beta-D-fructofuranose, ADENOSINE-5'-DIPHOSPHATE, ...
Authors:Lynch, E.M, Kollman, J.M, Webb, B.A.
Deposit date:2024-02-20
Release date:2024-09-11
Last modified:2024-09-25
Method:ELECTRON MICROSCOPY (3 Å)
Cite:Structural basis for allosteric regulation of human phosphofructokinase-1.
Nat Commun, 15, 2024
9FST
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BU of 9fst by Molmil
Yeast 20S proteasome with human beta1i (1-51) in complex with epoxyketone inhibitor LU-001i
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, CHLORIDE ION, MAGNESIUM ION, ...
Authors:Maurits, E, Huber, E.M, Dekker, P.M, Wang, X, Heinemeyer, W, Florea, B.I, Groll, M, Overkleeft, H.S.
Deposit date:2024-06-21
Release date:2024-07-17
Method:X-RAY DIFFRACTION (2.75 Å)
Cite:Structure-based design of peptide epoxyketones selectively targeting the three human immunoproteasome active sites
To Be Published
9C5E
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BU of 9c5e by Molmil
Covalent Complex Between Parkin Catalytic (Rcat) Domain and Ubiquitin
Descriptor: E3 ubiquitin-protein ligase parkin, Polyubiquitin-B, ZINC ION
Authors:Connelly, E.M, Rintala-Dempsey, A.C, Gundogdu, M, Freeman, E.A, Koszela, J, Aguirre, J.D, Zhu, G, Kamarainen, O, Tadayon, R, Walden, H, Shaw, G.S.
Deposit date:2024-06-06
Release date:2024-08-14
Last modified:2024-10-09
Method:SOLUTION NMR
Cite:Capturing the catalytic intermediates of parkin ubiquitination.
Proc.Natl.Acad.Sci.USA, 121, 2024
8W2H
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BU of 8w2h by Molmil
Human liver phosphofructokinase-1 in the T-state conformation
Descriptor: 1,6-di-O-phosphono-beta-D-fructofuranose, ADENOSINE-5'-TRIPHOSPHATE, ATP-dependent 6-phosphofructokinase, ...
Authors:Lynch, E.M, Kollman, J.M, Webb, B.A.
Deposit date:2024-02-20
Release date:2024-09-11
Last modified:2024-09-25
Method:ELECTRON MICROSCOPY (2.6 Å)
Cite:Structural basis for allosteric regulation of human phosphofructokinase-1.
Nat Commun, 15, 2024
9FWC
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BU of 9fwc by Molmil
Coxsackievirus B3 3C protease in C121 spacegroup
Descriptor: Genome polyprotein
Authors:Fairhead, M, Lithgo, R.M, MacLean, E.M, Bowesman-Jones, H, Aschenbrenner, J.C, Balcomb, B.H, Capkin, E, Chandran, A.V, Godoy, A.S, Marples, P.G, Fearon, D, von Delft, F, Koekemoer, L.
Deposit date:2024-06-28
Release date:2024-07-10
Method:X-RAY DIFFRACTION (1.34 Å)
Cite:Coxsackievirus B3 3C protease in C121 spacegroup
To Be Published
9B8P
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BU of 9b8p by Molmil
Synaptic Vesicle V-ATPase with synaptophysin and SidK, State 3, V1
Descriptor: ADENOSINE-5'-DIPHOSPHATE, ATPase H+-transporting V1 subunit D, H(+)-transporting two-sector ATPase, ...
Authors:Coupland, E.M, Rubinstein, J.L.
Deposit date:2024-03-31
Release date:2024-07-03
Last modified:2024-07-24
Method:ELECTRON MICROSCOPY (3.2 Å)
Cite:High-resolution electron cryomicroscopy of V-ATPase in native synaptic vesicles.
Science, 385, 2024
9FQ2
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BU of 9fq2 by Molmil
Poliovirus 3C protease in H32 spacegroup
Descriptor: Protease 3C
Authors:Fairhead, M, Lithgo, R.M, MacLean, E.M, Bowesman-Jones, H, Aschenbrenner, J.C, Balcomb, B.H, Capkin, E, Chandran, A.V, Godoy, A.S, Marples, P.G, Fearon, D, von Delft, F, Koekemoer, L.
Deposit date:2024-06-14
Release date:2024-06-26
Method:X-RAY DIFFRACTION (2.37 Å)
Cite:Poliovirus 3C protease in H32 spacegroup
To Be Published
9FT1
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BU of 9ft1 by Molmil
Yeast 20S proteasome in complex with epoxyketone inhibitor 13
Descriptor: 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, MAGNESIUM ION, Probable proteasome subunit alpha type-7, ...
Authors:Maurits, E, Huber, E.M, Dekker, P.M, Wang, X, Heinemeyer, W, Florea, B.I, Groll, M, Overkleeft, H.S.
Deposit date:2024-06-23
Release date:2024-07-10
Last modified:2024-07-17
Method:X-RAY DIFFRACTION (2.6 Å)
Cite:Structure-based design of peptide epoxyketones selectively targeting the three human immunoproteasome active sites
to be published
7PPX
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BU of 7ppx by Molmil
ATAD2 in complex with FragLite3
Descriptor: 1,2-ETHANEDIOL, 4-bromanyl-1,2-oxazole, ATPase family AAA domain-containing protein 2, ...
Authors:Turberville, S, Martin, M.P, Hope, I, Wood, D.J, Ng, Y.M, Heath, R, Endicott, J.A, Noble, M.E.M.
Deposit date:2021-09-15
Release date:2022-09-21
Last modified:2024-01-31
Method:X-RAY DIFFRACTION (1.35 Å)
Cite:Mapping Ligand Interactions of Bromodomains BRD4 and ATAD2 with FragLites and PepLites─Halogenated Probes of Druglike and Peptide-like Molecular Interactions.
J.Med.Chem., 65, 2022
9GII
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BU of 9gii by Molmil
Jumonji domain-containing protein 2A with crystallization epitope mutation R913A
Descriptor: GLYCEROL, Lysine-specific demethylase 4A, SULFATE ION
Authors:Fairhead, M, Strain-Damerell, C, Ye, M, Mackinnon, S.R, Pinkas, D, MacLean, E.M, Koekemoer, L, Damerell, D, Krojer, T, Arrowsmith, C.H, Edwards, A, Bountra, C, Yue, W, Burgess-Brown, N, Marsden, B, von Delft, F, Structural Genomics Consortium (SGC)
Deposit date:2024-08-19
Release date:2024-09-04
Method:X-RAY DIFFRACTION (1.7 Å)
Cite:A fast, parallel method for efficiently exploring crystallization behaviour of large numbers of protein variants
To be published
7PTF
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BU of 7ptf by Molmil
Pseudomonas aeruginosa DNA gyrase B 24kDa ATPase subdomain complexed with novobiocin
Descriptor: (4R)-2-METHYLPENTANE-2,4-DIOL, 2-(N-MORPHOLINO)-ETHANESULFONIC ACID, DNA gyrase subunit B, ...
Authors:Cotman, A.E, Zega, A, Zidar, N, Ilas, J, Tomasic, T, Masic, L.P, Mundy, J.E.A, Stevenson, C.E.M, Burton, N, Lawson, D.M, Maxwell, A, Kikelj, D.
Deposit date:2021-09-27
Release date:2022-10-05
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.32 Å)
Cite:Discovery and Hit-to-Lead Optimization of Benzothiazole Scaffold-Based DNA Gyrase Inhibitors with Potent Activity against Acinetobacter baumannii and Pseudomonas aeruginosa.
J.Med.Chem., 66, 2023
7PTG
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BU of 7ptg by Molmil
Pseudomonas aeruginosa DNA gyrase B 24kDa ATPase subdomain complexed with EBL2888
Descriptor: 2-[[3,4-bis(chloranyl)-5-methyl-1H-pyrrol-2-yl]carbonylamino]-4-[(1S)-1-phenylethoxy]-1,3-benzothiazole-6-carboxylic acid, DNA gyrase subunit B
Authors:Cotman, A.E, Zega, A, Zidar, N, Ilas, J, Tomasic, T, Masic, L.P, Mundy, J.E.A, Stevenson, C.E.M, Burton, N, Lawson, D.M, Maxwell, A, Kikelj, D.
Deposit date:2021-09-27
Release date:2022-10-05
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (2.2 Å)
Cite:Discovery and Hit-to-Lead Optimization of Benzothiazole Scaffold-Based DNA Gyrase Inhibitors with Potent Activity against Acinetobacter baumannii and Pseudomonas aeruginosa.
J.Med.Chem., 66, 2023
7PQI
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BU of 7pqi by Molmil
Acinetobacter baumannii DNA gyrase B 23kDa ATPase subdomain complexed with novobiocin
Descriptor: 1,2-ETHANEDIOL, DNA gyrase subunit B, NOVOBIOCIN
Authors:Cotman, A.E, Zega, A, Zidar, N, Ilas, J, Tomasic, T, Masic, L.P, Mundy, J.E.A, Stevenson, C.E.M, Burton, N, Lawson, D.M, Maxwell, A, Kikelj, D.
Deposit date:2021-09-17
Release date:2022-09-28
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.9 Å)
Cite:Discovery and Hit-to-Lead Optimization of Benzothiazole Scaffold-Based DNA Gyrase Inhibitors with Potent Activity against Acinetobacter baumannii and Pseudomonas aeruginosa.
J.Med.Chem., 66, 2023
7PQM
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BU of 7pqm by Molmil
Acinetobacter baumannii DNA gyrase B 23kDa ATPase subdomain complexed with EBL2888
Descriptor: 2-[[3,4-bis(chloranyl)-5-methyl-1H-pyrrol-2-yl]carbonylamino]-4-[(1S)-1-phenylethoxy]-1,3-benzothiazole-6-carboxylic acid, CALCIUM ION, DNA gyrase subunit B
Authors:Cotman, A.E, Zega, A, Zidar, N, Ilas, J, Tomasic, T, Masic, L.P, Mundy, J.E.A, Stevenson, C.E.M, Burton, N, Lawson, D.M, Maxwell, A, Kikelj, D.
Deposit date:2021-09-17
Release date:2022-09-28
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.55 Å)
Cite:Discovery and Hit-to-Lead Optimization of Benzothiazole Scaffold-Based DNA Gyrase Inhibitors with Potent Activity against Acinetobacter baumannii and Pseudomonas aeruginosa.
J.Med.Chem., 66, 2023
7PQL
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BU of 7pql by Molmil
Acinetobacter baumannii DNA gyrase B 23kDa ATPase subdomain complexed with EBL2704
Descriptor: 2-[[3,4-bis(chloranyl)-5-methyl-1H-pyrrol-2-yl]carbonylamino]-4-[(1R)-1-phenylethoxy]-1,3-benzothiazole-6-carboxylic acid, 2-[[3,4-bis(chloranyl)-5-methyl-1H-pyrrol-2-yl]carbonylamino]-4-[(1S)-1-phenylethoxy]-1,3-benzothiazole-6-carboxylic acid, DNA gyrase subunit B
Authors:Cotman, A.E, Zega, A, Zidar, N, Ilas, J, Tomasic, T, Masic, L.P, Mundy, J.E.A, Stevenson, C.E.M, Burton, N, Lawson, D.M, Maxwell, A, Kikelj, D.
Deposit date:2021-09-17
Release date:2022-09-28
Last modified:2024-02-07
Method:X-RAY DIFFRACTION (1.6 Å)
Cite:Discovery and Hit-to-Lead Optimization of Benzothiazole Scaffold-Based DNA Gyrase Inhibitors with Potent Activity against Acinetobacter baumannii and Pseudomonas aeruginosa.
J.Med.Chem., 66, 2023
5AOH
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BU of 5aoh by Molmil
Crystal Structure of CarF
Descriptor: POTASSIUM ION, Spore coat protein CotH
Authors:Tichy, E.M, Hardwick, S.W, Luisi, B.F, C Salmond, G.P.
Deposit date:2015-09-10
Release date:2017-01-25
Last modified:2019-09-25
Method:X-RAY DIFFRACTION (1.8 Å)
Cite:1.8 angstrom resolution crystal structure of the carbapenem intrinsic resistance protein CarF.
Acta Crystallogr D Struct Biol, 73, 2017
7QFN
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BU of 7qfn by Molmil
Human Topoisomerase II Beta ATPase ADP
Descriptor: ADENOSINE-5'-DIPHOSPHATE, DNA topoisomerase 2-beta, MAGNESIUM ION, ...
Authors:Ling, E.M, Basle, A, Cowell, I.G, Blower, T.R, Austin, C.A.
Deposit date:2021-12-06
Release date:2022-05-25
Last modified:2024-06-19
Method:X-RAY DIFFRACTION (2.621 Å)
Cite:A comprehensive structural analysis of the ATPase domain of human DNA topoisomerase II beta bound to AMPPNP, ADP, and the bisdioxopiperazine, ICRF193.
Structure, 30, 2022

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